Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 5.7e-89 330.9 164 100.0
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.0e-74 283.5 174 83.9
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.2e-51 206.8 150 68.0
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.0e-50 203.8 178 60.7
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 1.8e-50 203.0 178 60.7
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.8e-50 203.0 178 60.7
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 1.5e-49 199.9 164 61.0
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.0e-49 199.5 164 62.2
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 5.7e-49 198.0 173 58.4
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 2.2e-48 196.1 164 61.0
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 3.7e-48 195.3 183 59.0
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 6.3e-48 194.5 170 59.4
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 8.3e-48 194.1 157 59.9
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 8.3e-48 194.1 183 59.0
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 3.1e-47 192.2 174 57.5
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 5.9e-46 188.0 164 57.3
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 7.8e-46 187.6 164 57.9
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 7.8e-46 187.6 180 56.1
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 2.9e-45 185.7 163 57.1
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.5e-44 183.3 179 55.3
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 1.9e-44 183.0 169 58.0
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.5e-44 182.6 182 56.6
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 4.3e-44 181.8 178 50.6
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 5.6e-44 181.4 168 57.7
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 5.6e-44 181.4 179 54.7
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 7.3e-44 181.0 164 54.9
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 7.3e-44 181.0 174 52.3
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 1.6e-43 179.9 164 56.7
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 2.8e-43 179.1 164 56.1
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 2.8e-43 179.1 167 56.3
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 3.6e-43 178.7 160 55.6
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 8.0e-43 177.6 179 54.2
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.8e-42 176.4 181 52.5
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.3e-42 176.0 164 54.3
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 2.3e-42 176.0 179 55.3
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.3e-42 176.0 202 47.0
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 3.0e-42 175.6 195 50.8
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 4.0e-42 175.3 167 53.9
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 5.2e-42 174.9 171 52.6
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 6.8e-42 174.5 181 53.6
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 1.2e-41 173.7 179 54.7
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 2.0e-41 172.9 165 54.5
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 2.0e-41 172.9 162 53.1
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 2.0e-41 172.9 166 54.8
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 3.4e-41 172.2 175 53.7
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 3.4e-41 172.2 175 53.7
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 5.8e-41 171.4 183 51.4
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 7.5e-41 171.0 162 54.9
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 9.8e-41 170.6 178 51.1
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 9.8e-41 170.6 178 51.1
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 9.8e-41 170.6 178 51.1
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 9.8e-41 170.6 180 51.7
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.9e-40 169.1 168 52.4
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 3.7e-40 168.7 183 51.4
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 3.7e-40 168.7 180 51.1
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 3.7e-40 168.7 184 50.5
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 3.7e-40 168.7 174 51.1
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 4.9e-40 168.3 162 53.7
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 4.9e-40 168.3 134 61.2
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 6.4e-40 167.9 179 52.5
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 1.1e-39 167.2 186 50.0
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 1.1e-39 167.2 178 51.1
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 2.4e-39 166.0 180 50.6
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 9.2e-39 164.1 186 49.5
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 9.2e-39 164.1 186 49.5
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 1.2e-38 163.7 163 52.8
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.2e-38 163.7 99 72.7
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.6e-38 163.3 168 48.2
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 2.0e-38 162.9 187 49.2
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 2.0e-38 162.9 163 52.8
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 2.0e-38 162.9 163 52.8
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 2.7e-38 162.5 163 52.1
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 3.5e-38 162.2 183 47.0
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.6e-38 161.8 188 51.6
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 6.0e-38 161.4 162 50.6
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 7.8e-38 161.0 163 50.3
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 1.0e-37 160.6 163 52.1
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 2.3e-37 159.5 180 51.1
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 8.6e-37 157.5 188 48.9
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 8.6e-37 157.5 99 66.7
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 1.1e-36 157.1 162 49.4
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.9e-36 156.4 162 50.0
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 2.5e-36 156.0 162 50.6
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 7.3e-36 154.5 162 50.0
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 3.6e-35 152.1 164 51.2
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 2.3e-34 149.4 162 50.0
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 9.8e-33 144.1 157 47.8
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 6.4e-32 141.4 184 46.7
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.4e-31 140.2 157 47.8
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.1e-30 136.3 99 60.6
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 1.3e-29 133.7 173 43.4
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 8.6e-29 131.0 192 40.1
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 8.9e-26 120.9 116 55.2
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 5.8e-25 118.2 158 40.5
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 7.1e-23 111.3 129 48.8
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.2e-22 110.5 93 58.1
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.6e-22 110.2 107 49.5
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 4.7e-19 98.6 174 37.4
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 6.8e-18 94.7 133 42.9
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 7.1e-15 84.7 51 72.5
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 1.2e-11 73.9 115 36.5
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 5.2e-10 68.6 41 70.7
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 2.0e-09 66.6 150 29.3
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 4.4e-09 65.5 157 31.2
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.2e-07 59.3 41 70.7
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 4.2e-07 58.9 83 44.6
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 9.3e-07 57.8 36 63.9
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 2.7e-06 56.2 73 43.8


User provided reference genes

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