Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3510 Cannabis sativa HOM05D008262 ORTHO05D010389 9.9e-84 313.5 174 100.0
CANSAT56G4204 Cannabis sativa HOM05D008262 ORTHO05D010389 9.9e-84 313.5 174 100.0
MD10G1326900 Malus domestica HOM05D008262 ORTHO05D010389 4.5e-28 128.6 174 48.3
Cfa000160 Carpinus fangiana HOM05D008262 ORTHO05D010389 1.0e-27 127.5 174 50.0
Dinv20108 Davidia involucrata HOM05D008262 ORTHO05D010389 2.9e-27 125.9 173 51.4
Prupe.4G015100 Prunus persica HOM05D008262 ORTHO05D010389 3.3e-26 122.5 176 47.7
GSVIVG01004813001 Vitis vinifera HOM05D008262 ORTHO05D010389 3.3e-26 122.5 169 52.1
QL05p071877 Quercus lobata HOM05D008262 ORTHO05D010389 4.2e-26 122.1 173 50.3
Thecc.06G228300 Theobroma cacao HOM05D008262 ORTHO05D010389 1.2e-23 114.0 166 51.8
Haze_06858 Corylus avellana HOM05D008262 ORTHO05D010389 7.5e-23 111.3 151 51.7
GSVIVG01004816001 Vitis vinifera HOM05D008262 ORTHO05D010389 9.8e-23 110.9 160 50.6
Hma1.2p1_1358F.1_g278000 Hydrangea macrophylla HOM05D008262 ORTHO05D010389 1.3e-22 110.5 169 46.2
TAR626G1083 Trochodendron aralioides HOM05D008262 ORTHO05D010389 4.9e-22 108.6 175 46.3
Duzib160G0751 Durio zibethinus HOM05D008262 ORTHO05D010389 2.0e-20 103.2 173 46.8
Potri.004G004100 Populus trichocarpa HOM05D008262 ORTHO05D010389 1.3e-19 100.5 169 43.2
Actinidia39261 Actinidia chinensis HOM05D008262 ORTHO05D010389 3.8e-19 99.0 157 47.1
FAN08G2823 Fragaria x ananassa HOM05D008262 ORTHO05D010389 5.0e-19 98.6 144 46.5
Gohir.D06G157400 Gossypium hirsutum HOM05D008262 ORTHO05D010389 5.0e-19 98.6 157 47.8
Potri.006G270200 Populus trichocarpa HOM05D008262 ORTHO05D010389 5.0e-19 98.6 165 43.0
Potri.011G011400 Populus trichocarpa HOM05D008262 ORTHO05D010389 5.0e-19 98.6 165 43.0
Ciclev10017034m.g Citrus clementina HOM05D008262 ORTHO05D010389 1.5e-18 97.1 170 44.1
Gorai.010G183900 Gossypium raimondii HOM05D008262 ORTHO05D010389 1.9e-18 96.7 157 47.1
RcHm_v2.0_Chr5g0002091 Rosa chinensis HOM05D008262 ORTHO05D010389 4.3e-18 95.5 127 49.6
FAN04G2856 Fragaria x ananassa HOM05D008262 ORTHO05D010389 5.6e-18 95.1 144 45.8
FvH4_5g10500 Fragaria vesca HOM05D008262 ORTHO05D010389 7.3e-18 94.7 129 48.1
Sed0027045 Sechium edule HOM05D008262 ORTHO05D010389 1.2e-17 94.0 157 42.0
FAN18G3649 Fragaria x ananassa HOM05D008262 ORTHO05D010389 1.6e-17 93.6 129 47.3
FAN13G3130 Fragaria x ananassa HOM05D008262 ORTHO05D010389 1.0e-16 90.9 146 44.5
ClCG01G021670 Citrullus lanatus HOM05D008262 ORTHO05D010389 1.8e-16 90.1 176 42.0
Gohir.A06G151200 Gossypium hirsutum HOM05D008262 ORTHO05D010389 1.8e-16 90.1 157 45.2
PSO210G6064 Papaver somniferum HOM05D008262 ORTHO05D010389 2.3e-16 89.7 177 40.7
Sabra11G0011600 Salix brachista HOM05D001288 ORTHO05D010389 2.3e-16 89.7 158 42.4
PSO832G2202 Papaver somniferum HOM05D008262 ORTHO05D010389 2.0e-15 86.7 177 40.1
CsaV3_6G048720 Cucumis sativus L. HOM05D008262 ORTHO05D010389 4.4e-15 85.5 160 43.1
MELO3C007418.2 Cucumis melo HOM05D008262 ORTHO05D010389 3.7e-14 82.4 161 41.0
Lsat_1_v5_gn_7_14921 Lactuca sativa HOM05D008262 ORTHO05D010389 4.9e-14 82.0 138 44.9
Nn1g07277 Nelumbo nucifera HOM05D008262 ORTHO05D010389 6.4e-14 81.6 151 39.7
Sabra11G0010100 Salix brachista HOM05D008262 ORTHO05D010389 1.4e-13 80.5 145 41.4
vmacro15804 Vaccinium macrocarpon HOM05D008262 ORTHO05D010389 1.4e-13 80.5 152 43.4
Cpa.g.c34179.2 Carica papaya HOM05D008262 ORTHO05D010389 1.2e-12 77.4 130 43.1
CiPaw.09G098200 Carya illinoinensis HOM05D008262 ORTHO05D010389 3.5e-12 75.9 170 38.8
Rhsim02G0104900 Rhododendron simsii HOM05D008262 ORTHO05D010389 1.0e-11 74.3 163 40.5
HanXRQChr15g0470801 Helianthus annuus HOM05D008262 ORTHO05D010389 1.3e-11 73.9 157 36.9
A01p13510 Brassica napus HOM05D008262 ORTHO05D010389 6.6e-11 71.6 122 41.8
BraA01t01292Z Brassica rapa HOM05D008262 ORTHO05D010389 6.6e-11 71.6 122 41.8
BcaNung03758 Brassica carinata HOM05D008262 ORTHO05D010389 1.5e-10 70.5 122 41.8
C01p16340 Brassica napus HOM05D008262 ORTHO05D010389 1.5e-10 70.5 167 35.9
BolC1t01585H Brassica oleracea HOM05D008262 ORTHO05D010389 1.5e-10 70.5 167 35.9
AL7G31530 Arabidopsis lyrata HOM05D008262 ORTHO05D010389 1.9e-10 70.1 160 36.9
AT4G22160 Arabidopsis thaliana HOM05D008262 ORTHO05D010389 1.9e-10 70.1 109 46.8
Sp7g20320 Schrenkiella parvula HOM05D008262 ORTHO05D010389 4.3e-10 68.9 106 47.2
Carub.0007s1916 Capsella rubella HOM05D008262 ORTHO05D010389 1.4e-08 63.9 111 44.1
CARHR228990 Cardamine hirsuta HOM05D008262 ORTHO05D010389 1.4e-08 63.9 120 43.3
BcaC09g51156 Brassica carinata HOM05D008262 ORTHO05D010389 6.8e-08 61.6 121 40.5
Thhalv10026500m.g Eutrema salsugineum HOM05D008262 ORTHO05D010389 8.9e-08 61.2 114 42.1
MBI05_g29353_MAGBIO Magnolia biondii HOM05D008262 ORTHO05D010389 3.7e-06 55.8 90 45.6


User provided reference genes

Program Settings