Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 1.6e-240 835.9 453 100.0
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 4.4e-161 572.0 394 71.3
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 9.9e-161 570.9 424 67.7
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 9.9e-161 570.9 394 71.1
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 8.4e-160 567.8 395 71.6
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.4e-159 567.0 394 70.8
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 2.1e-158 563.1 394 70.3
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 3.0e-157 559.3 425 68.0
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 4.7e-155 552.0 394 69.3
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 1.4e-154 550.4 422 66.8
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 1.4e-154 550.4 387 71.1
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 3.1e-154 549.3 394 69.0
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 1.2e-153 547.4 422 64.9
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 1.2e-153 547.4 411 65.7
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 1.2e-153 547.4 396 68.4
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.2e-153 547.4 425 64.9
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 1.5e-153 547.0 465 62.6
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 9.9e-153 544.3 394 68.5
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.2e-152 543.1 395 69.4
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 6.4e-152 541.6 369 70.7
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 1.1e-151 540.8 426 64.8
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 4.2e-151 538.9 395 69.4
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 5.4e-151 538.5 395 69.4
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 9.3e-151 537.7 393 68.4
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 1.6e-150 537.0 424 63.7
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.3e-149 533.9 403 67.0
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 1.7e-149 533.5 396 67.9
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 3.0e-149 532.7 397 66.5
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 3.9e-149 532.3 357 70.6
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 6.6e-149 531.6 372 68.5
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 1.5e-148 530.4 410 66.1
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 1.9e-148 530.0 420 66.4
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 2.5e-148 529.6 359 73.0
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 2.5e-148 529.6 396 67.4
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 3.3e-148 529.3 394 68.0
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 9.6e-148 527.7 357 69.5
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 1.3e-147 527.3 424 61.8
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 1.6e-147 526.9 433 61.2
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.6e-147 526.9 403 66.0
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 2.1e-147 526.6 383 67.6
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 3.6e-147 525.8 392 66.8
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 6.2e-147 525.0 394 64.5
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 6.9e-146 521.5 421 62.0
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 9.0e-146 521.2 340 72.9
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 1.5e-145 520.4 359 69.4
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 4.5e-145 518.8 396 64.9
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 5.8e-145 518.5 395 66.6
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 9.9e-145 517.7 407 63.1
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 9.9e-145 517.7 393 66.7
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 2.9e-144 516.2 367 68.1
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 2.9e-144 516.2 359 69.4
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 8.4e-144 514.6 417 62.6
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 1.4e-143 513.8 395 65.3
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 5.4e-143 511.9 359 69.1
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 7.1e-143 511.5 390 65.9
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 9.3e-143 511.1 356 69.7
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 1.2e-142 510.8 417 61.9
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 1.2e-142 510.8 392 65.6
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 1.2e-142 510.8 359 69.1
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 1.2e-142 510.8 458 59.0
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 2.1e-142 510.0 416 61.1
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 2.7e-142 509.6 421 61.8
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 3.5e-142 509.2 397 64.7
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 7.9e-142 508.1 340 70.6
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.0e-141 507.7 416 61.8
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 1.3e-141 507.3 407 62.4
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 1.7e-141 506.9 339 71.1
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 3.0e-141 506.1 394 64.7
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 5.1e-141 505.4 360 66.1
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 6.6e-141 505.0 426 61.0
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 1.9e-140 503.4 398 63.3
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 1.9e-140 503.4 413 60.8
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 5.6e-140 501.9 395 61.5
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 2.8e-139 499.6 349 70.2
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 3.6e-139 499.2 371 66.6
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 8.1e-139 498.0 371 66.6
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 2.4e-138 496.5 395 64.1
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 4.0e-138 495.7 400 62.0
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 5.3e-138 495.4 373 65.1
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 9.0e-138 494.6 372 64.8
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 1.2e-137 494.2 455 57.6
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 1.3e-136 490.7 321 73.5
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 1.3e-136 490.7 395 62.8
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 1.7e-136 490.3 395 61.8
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 1.7e-136 490.3 392 64.5
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 4.6e-134 482.3 426 58.5
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 4.6e-134 482.3 426 58.5
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 1.1e-132 477.6 356 63.8
AUR62025903 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.4e-129 466.1 395 59.7
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 7.6e-129 464.9 421 56.8
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 1.0e-128 464.5 425 57.2
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 1.0e-128 464.5 383 59.0
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 2.2e-128 463.4 426 57.0
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 3.8e-128 462.6 425 57.2
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 8.4e-128 461.5 446 53.8
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 4.2e-127 459.1 374 59.1
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 4.2e-127 459.1 373 59.2
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 5.5e-127 458.8 376 59.3
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 1.2e-126 457.6 374 58.8
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 1.6e-126 457.2 387 57.6
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 2.7e-126 456.4 391 59.1
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 2.7e-126 456.4 396 60.9
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 6.0e-126 455.3 402 57.7
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 2.3e-125 453.4 373 59.0
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 2.3e-125 453.4 360 60.0
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 3.9e-125 452.6 375 58.7
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 3.9e-125 452.6 375 58.7
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 8.7e-125 451.4 372 58.9
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 8.7e-125 451.4 356 61.8
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.6e-123 447.2 392 59.7
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 3.7e-123 446.0 372 58.1
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 6.9e-122 441.8 451 53.2
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 1.0e-120 438.0 349 63.6
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 1.7e-120 437.2 425 54.1
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 2.2e-120 436.8 358 59.8
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 1.9e-119 433.7 423 55.6
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 3.6e-118 429.5 402 54.2
AUR62025086 Chenopodium quinoa HOM05D004497 ORTHO05D005539 6.7e-117 425.2 344 61.3
Duzib068G0683 Durio zibethinus HOM05D004497 ORTHO05D005539 6.3e-115 418.7 290 70.0
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 4.1e-114 416.0 404 50.5
Cpa.g.sc166.23 Carica papaya HOM05D004497 ORTHO05D005539 1.1e-111 407.9 291 66.3
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.7e-107 394.0 407 51.6
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 1.7e-104 384.0 324 59.6
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 3.8e-104 382.9 288 66.3
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 2.8e-99 366.7 291 61.9
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 4.1e-98 362.8 293 61.4
Os07g0506700 Oryza sativa ssp. japonica HOM05D004497 ORTHO05D005539 2.3e-93 347.1 294 57.5
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 4.0e-93 346.3 422 47.6
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 1.4e-90 337.8 399 45.6
AUR62025094 Chenopodium quinoa HOM05D004497 ORTHO05D005539 2.7e-89 333.6 304 55.9
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 3.5e-89 333.2 379 45.9
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 4.7e-86 322.8 399 45.9
Nitab4.5_0003013g0030 Nicotiana tabacum HOM05D004497 ORTHO05D005539 6.3e-83 312.4 345 50.4
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 2.2e-75 287.3 373 45.6
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 7.0e-74 282.3 181 70.7
AUR62029644 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.4e-60 236.9 228 54.4
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 3.7e-59 233.4 302 42.7
Actinidia19491 Actinidia chinensis HOM05D004497 ORTHO05D005539 2.0e-57 227.6 324 42.9
RcHm_v2.0_Chr0c30g0501231 Rosa chinensis HOM05D004497 ORTHO05D005539 3.6e-54 216.9 361 39.1
RcHm_v2.0_Chr3g0452771 Rosa chinensis HOM05D004497 ORTHO05D005539 3.6e-54 216.9 361 39.1
AUR62025088 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.5e-52 211.5 229 49.3
Ca_16680_v3 Cicer arietinum L. HOM05D000160 ORTHO05D000496 2.0e-52 211.1 166 60.2
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.4e-50 204.9 165 63.6
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 1.2e-44 185.3 388 32.5
RcHm_v2.0_Chr5g0041021 Rosa chinensis HOM05D004497 ORTHO05D005539 2.2e-43 181.0 369 34.7
AUR62025079 Chenopodium quinoa HOM05D004497 ORTHO05D005539 3.0e-32 144.1 157 47.1
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 2.7e-25 120.9 394 28.4
Gohir.D13G181701 Gossypium hirsutum HOM05D004497 ORTHO05D005539 4.6e-25 120.2 104 60.6
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 7.9e-25 119.4 386 26.4
Oeu006698.1 Olea europaea HOM05D004497 ORTHO05D005539 1.9e-18 98.2 71 66.2
AUR62025092 Chenopodium quinoa HOM05D004497 ORTHO05D005539 1.2e-17 95.5 53 83.0
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 1.3e-16 92.0 250 27.6
C04p39580 Brassica napus HOM05D004497 ORTHO05D005539 3.3e-15 87.4 86 53.5
BolC4t25523H Brassica oleracea HOM05D004497 ORTHO05D005539 3.3e-15 87.4 86 53.5
TAR371G1248 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.6e-14 85.1 124 43.5
COL.COLO4_36170 Corchorus olitorius HOM05D021494 ORTHO05D022415 1.7e-11 75.1 41 82.9
Phvul.003G017700 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 2.5e-10 71.2 75 49.3


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