Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3292 Cannabis sativa HOM05D008058 ORTHO05D010564 0.0e+00 1134.0 558 100.0
CANSAT01G0062 Cannabis sativa HOM05D008058 ORTHO05D001269 3.8e-254 881.3 495 91.7
CANSAT54G1186 Cannabis sativa HOM05D008058 ORTHO05D001269 6.5e-254 880.6 518 84.9
CANSAT01G1802 Cannabis sativa HOM05D008058 ORTHO05D001269 8.2e-164 581.3 300 98.7
CANSAT54G2324 Cannabis sativa HOM05D008058 ORTHO05D010564 3.8e-129 466.1 245 90.6
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 1.7e-108 397.5 200 92.0
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 6.8e-102 375.6 186 92.5
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-100 371.3 245 75.5
ATR0204G001 Amborella trichopoda HOM05D008058 ORTHO05D010564 6.6e-81 305.8 531 36.0
CANSAT21G1517 Cannabis sativa HOM05D008058 ORTHO05D010564 4.3e-80 303.1 199 78.9
CANSAT21G0863 Cannabis sativa HOM05D008058 ORTHO05D001269 9.6e-72 275.4 487 36.6
CANSAT64G3019 Cannabis sativa HOM05D008058 ORTHO05D001269 1.6e-66 258.1 123 98.4
CANSAT21G1491 Cannabis sativa HOM05D001081 ORTHO05D001269 3.4e-53 213.8 410 36.8
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 7.7e-45 186.0 259 42.5
CANSAT56G0271 Cannabis sativa HOM05D009344 ORTHO05D001269 6.1e-42 176.4 177 49.2
CANSAT80G0349 Cannabis sativa HOM05D008058 ORTHO05D010564 7.9e-42 176.0 468 29.5
CANSAT78G1108 Cannabis sativa HOM05D008058 ORTHO05D001269 3.9e-41 173.7 353 38.0
CANSAT25G0774 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-39 167.9 427 30.4
CANSAT54G2191 Cannabis sativa HOM05D008058 ORTHO05D001269 1.8e-38 164.9 253 39.1
CANSAT21G2086 Cannabis sativa HOM05D008058 ORTHO05D010564 7.7e-37 159.5 230 38.7
CANSAT25G0604 Cannabis sativa HOM05D008058 ORTHO05D001269 2.9e-36 157.5 261 37.5
CANSAT25G3575 Cannabis sativa HOM05D008058 ORTHO05D010564 3.2e-35 154.1 368 33.2
CANSAT01G2795 Cannabis sativa HOM05D009344 ORTHO05D001269 5.2e-33 146.7 248 37.5
CANSAT64G2753 Cannabis sativa HOM05D008058 ORTHO05D010564 6.7e-33 146.4 292 32.5
CANSAT64G0708 Cannabis sativa HOM05D008058 ORTHO05D010564 2.6e-32 144.4 192 40.1
CANSAT56G2211 Cannabis sativa HOM05D009344 ORTHO05D001269 7.5e-32 142.9 291 34.4
CANSAT01G3260 Cannabis sativa HOM05D009344 ORTHO05D001269 2.2e-31 141.4 99 64.6
CANSAT78G1060 Cannabis sativa HOM05D009344 ORTHO05D001269 1.1e-30 139.0 238 36.1
CANSAT56G0432 Cannabis sativa HOM05D008058 ORTHO05D001269 1.2e-29 135.6 196 41.3
CANSAT01G1756 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-29 135.2 194 36.1
CANSAT21G2068 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-27 129.0 270 35.2
CANSAT80G2602 Cannabis sativa HOM05D008058 ORTHO05D010564 1.9e-27 128.3 200 38.5
CANSAT80G1860 Cannabis sativa HOM05D008058 ORTHO05D010564 7.2e-27 126.3 165 43.0
CANSAT64G0678 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-26 124.0 149 39.6
CANSAT25G3676 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-25 120.9 144 41.7
CANSAT35G0168 Cannabis sativa HOM05D009344 ORTHO05D001269 1.5e-24 118.6 233 36.1
CANSAT01G2151 Cannabis sativa HOM05D009344 ORTHO05D001269 2.2e-23 114.8 222 33.3
CANSAT35G1117 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-23 114.8 202 36.1
CANSAT01G2382 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-22 112.5 151 38.4
CANSAT11G2391 Cannabis sativa HOM05D009344 ORTHO05D001269 7.0e-22 109.8 140 42.1
CANSAT54G1975 Cannabis sativa HOM05D008058 ORTHO05D010564 2.0e-21 108.2 129 43.4
CANSAT92G0002 Cannabis sativa HOM05D009344 ORTHO05D001269 1.3e-20 105.5 122 43.4
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 2.9e-20 104.4 93 43.0
CANSAT35G1833 Cannabis sativa HOM05D009344 ORTHO05D001269 3.8e-20 104.0 118 44.9
CANSAT64G0575 Cannabis sativa HOM05D008058 ORTHO05D001269 3.8e-20 104.0 195 40.0
CANSAT25G1481 Cannabis sativa HOM05D009344 ORTHO05D001269 6.5e-20 103.2 109 47.7
CANSAT56G1132 Cannabis sativa HOM05D009344 ORTHO05D001269 1.1e-19 102.4 142 39.4
CANSAT78G1523 Cannabis sativa HOM05D008058 ORTHO05D001269 4.7e-18 97.1 71 62.0
CANSAT21G1374 Cannabis sativa HOM05D002326 ORTHO05D009991 6.1e-18 96.7 136 48.5
CANSAT01G2155 Cannabis sativa HOM05D008058 ORTHO05D010564 3.0e-17 94.4 107 41.1
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 4.4e-16 90.5 82 42.7
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 4.4e-16 90.5 82 41.5
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-14 85.5 82 40.2
CANSAT21G1675 Cannabis sativa HOM05D009344 ORTHO05D001269 1.8e-14 85.1 105 41.9
CANSAT64G2472 Cannabis sativa HOM05D008058 ORTHO05D010564 3.1e-14 84.3 88 42.0
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 3.1e-14 84.3 127 33.9
CANSAT80G1293 Cannabis sativa HOM05D008058 ORTHO05D001269 5.4e-14 83.6 101 44.6
CANSAT11G0773 Cannabis sativa HOM05D008058 ORTHO05D010564 7.0e-14 83.2 87 42.5
CANSAT35G0637 Cannabis sativa HOM05D009344 ORTHO05D001269 7.0e-14 83.2 94 42.6
TWI18G0445 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.0e-14 83.2 148 32.4
TWI39G0946 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.0e-14 83.2 148 32.4
TWI74G0931 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.0e-14 83.2 148 32.4
CANSAT56G0610 Cannabis sativa HOM05D008058 ORTHO05D010564 9.2e-14 82.8 87 42.5
CANSAT56G2831 Cannabis sativa HOM05D008058 ORTHO05D010564 9.2e-14 82.8 87 42.5
CANSAT78G0737 Cannabis sativa HOM05D008058 ORTHO05D001269 9.2e-14 82.8 175 37.1
CANSAT78G1561 Cannabis sativa HOM05D008058 ORTHO05D010564 9.2e-14 82.8 88 40.9
CANSAT21G1982 Cannabis sativa HOM05D008058 ORTHO05D010564 2.7e-13 81.3 88 42.0
CANSAT25G0360 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-13 80.9 88 42.0
CANSAT78G0252 Cannabis sativa HOM05D008058 ORTHO05D010564 3.5e-13 80.9 88 40.9
CANSAT78G1294 Cannabis sativa HOM05D009344 ORTHO05D001269 3.5e-13 80.9 75 42.7
CsaV3_3G031520 Cucumis sativus L. HOM05D010240 ORTHO05D010739 3.5e-13 80.9 159 31.4
Oeu044756.1 Olea europaea HOM05D007816 ORTHO05D000397 7.7e-13 79.7 138 31.9
TWI18G0429 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 7.7e-13 79.7 207 27.1
SGA_v2.0_scaffold91G28036 Striga asiatica HOM05D008585 ORTHO05D000397 1.0e-12 79.3 164 29.3
TWI63G1251 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.0e-12 79.3 148 31.8
CANSAT01G1382 Cannabis sativa HOM05D008058 ORTHO05D010564 1.3e-12 79.0 34 97.1
CANSAT01G2042 Cannabis sativa HOM05D009344 ORTHO05D001269 1.3e-12 79.0 89 43.8
CANSAT64G1497 Cannabis sativa HOM05D009344 ORTHO05D001269 1.7e-12 78.6 94 42.6
TWI36G1743 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.7e-12 78.6 207 26.6
TWI77G0850 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.3e-12 78.2 127 33.9
Oeu042812.1 Olea europaea HOM05D007816 ORTHO05D000397 2.9e-12 77.8 138 31.2
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.8e-12 77.4 207 26.6
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.8e-12 77.4 207 26.6
TWI32G0457 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.0e-12 77.0 207 26.6
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.0e-12 77.0 207 26.6
CANSAT35G1946 Cannabis sativa HOM05D009344 ORTHO05D001269 6.6e-12 76.6 87 41.4
TWI75G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 6.6e-12 76.6 127 33.9
Oeu021073.1 Olea europaea HOM05D006164 ORTHO05D001269 1.1e-11 75.9 207 29.0
SGA_v2.0_scaffold273G46471 Striga asiatica HOM05D008585 ORTHO05D000397 1.1e-11 75.9 160 30.6
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-11 75.9 128 31.2
CANSAT80G0885 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-11 74.3 81 42.0
CsaV3_1G032310 Cucumis sativus L. HOM05D010240 ORTHO05D000482 3.3e-11 74.3 131 33.6
CsaV3_5G014580 Cucumis sativus L. HOM05D010240 ORTHO05D010739 3.3e-11 74.3 131 33.6
CsaV3_6G008220 Cucumis sativus L. HOM05D010240 ORTHO05D000482 3.3e-11 74.3 131 33.6
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.3e-11 74.3 161 28.6
TWI38G0813 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.3e-11 74.3 128 30.5
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.3e-11 74.3 161 28.6
TWI73G0375 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.3e-11 74.3 161 28.6
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.3e-11 74.3 161 28.6
CANSAT80G2675 Cannabis sativa HOM05D002262 ORTHO05D000482 4.3e-11 73.9 129 29.5
Ciclev10017905m.g Citrus clementina HOM05D007816 ORTHO05D000482 4.3e-11 73.9 214 26.2
TWI12G0965 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.3e-11 73.9 123 34.1
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 5.6e-11 73.6 133 34.6
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 5.6e-11 73.6 133 34.6
SGA_v2.0_scaffold162G37930 Striga asiatica HOM05D008585 ORTHO05D000397 5.6e-11 73.6 129 31.8
SGA_v2.0_scaffold65G22152 Striga asiatica HOM05D008585 ORTHO05D000397 7.3e-11 73.2 160 31.2
TWI38G0271 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.6e-10 72.0 136 30.1
TWI77G0435 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.1e-10 71.6 127 33.1
C05p32520 Brassica napus HOM05D000471 ORTHO05D000199 3.6e-10 70.9 190 26.8
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 3.6e-10 70.9 130 30.8
Oeu022535.1 Olea europaea HOM05D008442 ORTHO05D001269 4.7e-10 70.5 131 32.1
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 6.1e-10 70.1 609 20.2
SGA_v2.0_scaffold164G38150 Striga asiatica HOM05D008585 ORTHO05D000397 8.0e-10 69.7 135 31.1
SGA_v2.0_scaffold491G52433 Striga asiatica HOM05D008585 ORTHO05D000397 8.0e-10 69.7 128 31.2
BolC5t30742H Brassica oleracea HOM05D000471 ORTHO05D000199 1.0e-09 69.3 136 30.9
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.0e-09 69.3 127 32.3
CANSAT54G2626 Cannabis sativa HOM05D009344 ORTHO05D001269 1.4e-09 68.9 81 40.7
SGA_v2.0_scaffold5241G54611 Striga asiatica HOM05D008585 ORTHO05D000397 1.4e-09 68.9 130 30.8
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 1.4e-09 68.9 127 32.3
CANSAT01G3114 Cannabis sativa HOM05D009344 ORTHO05D001269 1.8e-09 68.6 65 46.2
Thhalv10022509m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.8e-09 68.6 153 26.1
C02p43440 Brassica napus HOM05D000471 ORTHO05D000199 4.0e-09 67.4 134 29.1
Oeu016081.1 Olea europaea HOM05D000700 ORTHO05D000397 5.2e-09 67.0 167 26.3
A09p19790 Brassica napus HOM05D000471 ORTHO05D000199 8.9e-09 66.2 186 26.9
CANSAT64G2062 Cannabis sativa HOM05D009344 ORTHO05D001269 8.9e-09 66.2 76 40.8
C09p09790 Brassica napus HOM05D000471 ORTHO05D000199 1.2e-08 65.9 128 31.2
BolC8t47965H Brassica oleracea HOM05D000471 ORTHO05D000199 1.2e-08 65.9 135 29.6
C08p08800 Brassica napus HOM05D000471 ORTHO05D000199 1.5e-08 65.5 128 31.2
BolC2t09493H Brassica oleracea HOM05D000471 ORTHO05D000199 1.5e-08 65.5 137 28.5
CANSAT56G2017 Cannabis sativa HOM05D008058 ORTHO05D010564 1.5e-08 65.5 75 38.7
C05p33730 Brassica napus HOM05D000471 ORTHO05D000199 2.6e-08 64.7 128 31.2
BolC8t49704H Brassica oleracea HOM05D000471 ORTHO05D000199 2.6e-08 64.7 135 28.9
Oeu035659.1 Olea europaea HOM05D006164 ORTHO05D001269 3.4e-08 64.3 100 37.0
Oeu039922.1 Olea europaea HOM05D006164 ORTHO05D001269 3.4e-08 64.3 100 36.0
C06p05070 Brassica napus HOM05D000471 ORTHO05D000199 4.4e-08 63.9 128 30.5
BolC9t55686H Brassica oleracea HOM05D000471 ORTHO05D000199 4.4e-08 63.9 137 29.2
THA.LOC104815450 Tarenaya hassleriana HOM05D000675 ORTHO05D000395 4.4e-08 63.9 118 33.1
BolC9t56468H Brassica oleracea HOM05D000471 ORTHO05D000199 5.7e-08 63.5 137 28.5
Oeu034771.1 Olea europaea HOM05D006164 ORTHO05D001269 5.7e-08 63.5 100 36.0
BolC1t03410H Brassica oleracea HOM05D000471 ORTHO05D000199 7.5e-08 63.2 134 27.6
CANSAT56G3134 Cannabis sativa HOM05D008058 ORTHO05D010564 7.5e-08 63.2 84 31.0
BolC5t31893H Brassica oleracea HOM05D000471 ORTHO05D000199 9.8e-08 62.8 134 29.1
BraSC35t46011Z Brassica rapa HOM05D000471 ORTHO05D000199 9.8e-08 62.8 136 27.2
Oeu032477.1 Olea europaea HOM05D006164 ORTHO05D001269 1.3e-07 62.4 90 38.9
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 1.7e-07 62.0 136 26.5
BolC9t54977H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-07 62.0 136 26.5
Oeu027198.1 Olea europaea HOM05D006164 ORTHO05D001269 1.7e-07 62.0 90 35.6
BolC7t43513H Brassica oleracea HOM05D000471 ORTHO05D000199 2.2e-07 61.6 136 27.9
CsaV3_5G001270 Cucumis sativus L. HOM05D012996 ORTHO05D000482 2.2e-07 61.6 171 28.7
C04p30610 Brassica napus HOM05D000471 ORTHO05D000199 3.7e-07 60.8 136 26.5
BolC6t35529H Brassica oleracea HOM05D000471 ORTHO05D000199 3.7e-07 60.8 137 28.5
Sopen10g010760 Solanum pennellii HOM05D000002 ORTHO05D000001 3.7e-07 60.8 123 28.5
SGA_v2.0_scaffold41G15715 Striga asiatica HOM05D008585 ORTHO05D000397 3.7e-07 60.8 164 26.8
TWI74G1109 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 3.7e-07 60.8 103 33.0
MELO3C005820.2 Cucumis melo HOM05D012996 ORTHO05D000482 4.9e-07 60.5 172 27.9
Oeu043051.1 Olea europaea HOM05D008585 ORTHO05D000397 4.9e-07 60.5 107 32.7
TWI77G0416 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 4.9e-07 60.5 127 29.9
Oeu035441.1 Olea europaea HOM05D006164 ORTHO05D001269 6.4e-07 60.1 84 36.9
CANSAT01G1006 Cannabis sativa HOM05D008058 ORTHO05D001269 8.3e-07 59.7 125 37.6
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 1.1e-06 59.3 134 26.9
Nitab4.5_0014318g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.1e-06 59.3 249 22.9
Oeu060622.1 Olea europaea HOM05D006164 ORTHO05D001269 1.1e-06 59.3 105 36.2
PSO170G4386 Papaver somniferum HOM05D007816 ORTHO05D000397 1.1e-06 59.3 162 25.3
BolC1t02994H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-06 58.9 154 27.3
BraA03t15713Z Brassica rapa HOM05D000977 ORTHO05D001094 1.4e-06 58.9 121 29.8
CANSAT01G0119 Cannabis sativa HOM05D007816 ORTHO05D000482 1.4e-06 58.9 102 30.4
Nitab4.5_0006237g0050 Nicotiana tabacum HOM05D008646 ORTHO05D010739 1.4e-06 58.9 187 26.7
Aa31csc1523G10 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.8e-06 58.5 133 25.6
BcaC09g49808 Brassica carinata HOM05D000977 ORTHO05D001094 1.8e-06 58.5 119 26.9
BolC5t31468H Brassica oleracea HOM05D000977 ORTHO05D001094 1.8e-06 58.5 121 29.8
Oeu060279.1 Olea europaea HOM05D006164 ORTHO05D010236 1.8e-06 58.5 61 44.3
TWI81G0979 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.8e-06 58.5 128 26.6
Nitab4.5_0000383g0210 Nicotiana tabacum HOM05D009957 ORTHO05D012884 3.2e-06 57.8 168 26.8
BolC7t41755H Brassica oleracea HOM05D000471 ORTHO05D000199 4.1e-06 57.4 110 30.9
Oeu003797.1 Olea europaea HOM05D006164 ORTHO05D001269 4.1e-06 57.4 49 51.0
Oeu039421.1 Olea europaea HOM05D006164 ORTHO05D001269 4.1e-06 57.4 52 46.2
BolC7t43190H Brassica oleracea HOM05D000471 ORTHO05D000199 5.4e-06 57.0 111 28.8
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 5.4e-06 57.0 92 31.5
Oeu048979.1 Olea europaea HOM05D006164 ORTHO05D001269 5.4e-06 57.0 53 49.1
BolC4t23368H Brassica oleracea HOM05D000471 ORTHO05D000199 7.0e-06 56.6 109 32.1
Oeu045767.1 Olea europaea HOM05D006164 ORTHO05D001269 7.0e-06 56.6 94 35.1


User provided reference genes

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