Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3251 Cannabis sativa HOM05D006588 ORTHO05D008272 3.7e-157 558.1 276 100.0
CANSAT56G2228 Cannabis sativa HOM05D006588 ORTHO05D008272 1.9e-153 545.8 276 98.2
CANSAT56G3648 Cannabis sativa HOM05D006588 ORTHO05D008272 1.6e-152 542.7 276 97.5
CANSAT56G0790 Cannabis sativa HOM05D006588 ORTHO05D008272 5.7e-126 454.5 238 96.2
Atru.chr7.1520 Acer truncatum HOM05D006588 ORTHO05D008272 1.0e-82 310.8 277 56.7
Ciclev10008264m.g Citrus clementina HOM05D006588 ORTHO05D008272 2.6e-78 296.2 277 54.5
Thecc.09G094100 Theobroma cacao HOM05D006588 ORTHO05D008272 2.6e-78 296.2 272 54.4
Lj4C316T0 Lonicera japonica HOM05D006588 ORTHO05D008272 7.6e-78 294.7 280 53.9
CSS0027625 Camellia sinensis var. sinensis HOM05D006588 ORTHO05D008272 1.7e-77 293.5 277 54.2
TAR636G2459 Trochodendron aralioides HOM05D006588 ORTHO05D008272 6.4e-77 291.6 278 54.3
MSTRG.10583 Avicennia marina HOM05D006588 ORTHO05D008272 3.2e-76 289.3 277 52.3
Sc15g0003870 Simmondsia chinensis HOM05D006588 ORTHO05D008272 5.4e-76 288.5 278 51.4
Hma1.2p1_1074F.1_g254320 Hydrangea macrophylla HOM05D006588 ORTHO05D008272 3.5e-75 285.8 273 53.5
QL02p063459 Quercus lobata HOM05D006588 ORTHO05D008272 6.6e-74 281.6 273 54.9
Duzib150G1363 Durio zibethinus HOM05D006588 ORTHO05D008272 1.1e-73 280.8 269 53.2
Rhsim05G0031800 Rhododendron simsii HOM05D006588 ORTHO05D008272 1.1e-73 280.8 277 53.1
Manes.03G030400 Manihot esculenta HOM05D006588 ORTHO05D008272 1.5e-73 280.4 278 54.0
Cc06_g10980 Coffea canephora HOM05D006588 ORTHO05D008272 4.3e-73 278.9 274 52.2
Migut.K00574 Erythranthe guttata HOM05D006588 ORTHO05D008272 5.6e-73 278.5 279 50.9
Oeu018228.1 Olea europaea HOM05D006588 ORTHO05D008272 9.6e-73 277.7 274 51.1
Dinv36733 Davidia involucrata HOM05D006588 ORTHO05D008272 1.6e-72 276.9 247 57.1
vmacro10821 Vaccinium macrocarpon HOM05D006588 ORTHO05D008272 1.4e-71 273.9 278 52.2
Haze_25873 Corylus avellana HOM05D006588 ORTHO05D008272 9.0e-71 271.2 268 53.4
Gohir.D06G069300 Gossypium hirsutum HOM05D006588 ORTHO05D008272 9.0e-71 271.2 272 50.7
Gorai.010G080900 Gossypium raimondii HOM05D006588 ORTHO05D008272 9.0e-71 271.2 272 50.7
Cfa003132 Carpinus fangiana HOM05D006588 ORTHO05D008272 2.2e-69 266.5 266 52.3
Glyma.08G030700 Glycine max HOM05D006588 ORTHO05D008272 3.8e-69 265.8 279 49.5
Phvul.002G305400 Phaseolus vulgaris HOM05D006588 ORTHO05D008272 3.2e-68 262.7 276 48.9
SalBow1G2363 Salvia bowleyana HOM05D006588 ORTHO05D008272 3.2e-68 262.7 277 49.1
SalBow1G2795 Salvia bowleyana HOM05D006588 ORTHO05D008272 3.2e-68 262.7 277 49.1
SGA_v2.0_scaffold28G11949 Striga asiatica HOM05D006588 ORTHO05D008272 1.0e-66 257.7 277 46.9
Rhsim05G0031600 Rhododendron simsii HOM05D006588 ORTHO05D008272 2.3e-66 256.5 277 50.5
VMungo0251G0425 Vigna mungo HOM05D006588 ORTHO05D008272 8.7e-66 254.6 276 47.1
TPR.G25442 Trifolium pratense HOM05D006588 ORTHO05D008272 4.3e-65 252.3 286 46.2
MBI04_g06220_MAGBIO Magnolia biondii HOM05D006588 ORTHO05D008272 7.4e-65 251.5 276 46.4
Nn6g35407 Nelumbo nucifera HOM05D006588 ORTHO05D008272 1.6e-64 250.4 260 50.8
TWI34G1517 Tripterygium wilfordii HOM05D006588 ORTHO05D008272 3.7e-64 249.2 273 49.8
HanXRQChr09g0238251 Helianthus annuus HOM05D006588 ORTHO05D008272 8.1e-64 248.1 277 44.8
Psat7g018800 Pisum sativum HOM05D006588 ORTHO05D008272 1.8e-63 246.9 286 45.1
ClCG11G012860 Citrullus lanatus HOM05D006588 ORTHO05D008272 2.4e-63 246.5 271 46.5
Lalb_Chr09g0331761 Lupinus albus HOM05D006588 ORTHO05D008272 2.4e-63 246.5 279 45.9
Lsat_1_v5_gn_7_39041 Lactuca sativa HOM05D006588 ORTHO05D008272 3.1e-63 246.1 276 43.1
ECA240G3150 Erigeron canadensis HOM05D006588 ORTHO05D008272 5.3e-63 245.4 278 44.6
Lj4g0006334 Lotus japonicus HOM05D006588 ORTHO05D008272 6.9e-63 245.0 279 47.0
AT4G29420 Arabidopsis thaliana HOM05D006588 ORTHO05D008272 1.5e-62 243.8 276 44.9
Carub.0007s1112 Capsella rubella HOM05D006588 ORTHO05D008272 2.6e-62 243.0 277 45.1
AL7G22970 Arabidopsis lyrata HOM05D006588 ORTHO05D008272 4.5e-62 242.3 275 45.5
Sed0004057 Sechium edule HOM05D006588 ORTHO05D008272 4.5e-62 242.3 272 47.8
Thhalv10025196m.g Eutrema salsugineum HOM05D006588 ORTHO05D008272 9.9e-62 241.1 277 43.7
CARHR237240 Cardamine hirsuta HOM05D006588 ORTHO05D008272 1.3e-61 240.7 282 44.0
A01p08610 Brassica napus HOM05D006588 ORTHO05D008272 2.9e-61 239.6 278 45.7
BraA01t00812Z Brassica rapa HOM05D006588 ORTHO05D008272 3.8e-61 239.2 280 45.4
unitig_699.g19309 Utricularia gibba HOM05D006588 ORTHO05D008272 3.8e-61 239.2 275 44.7
Aa31LG2G21010 Aethionema arabicum HOM05D006588 ORTHO05D008272 1.1e-60 237.7 281 44.5
Sp7g27300 Schrenkiella parvula HOM05D006588 ORTHO05D008272 2.4e-60 236.5 279 43.4
Eucgr.C00929 Eucalyptus grandis HOM05D006588 ORTHO05D008272 2.1e-59 233.4 265 47.5
CsaV3_5G029260 Cucumis sativus L. HOM05D006588 ORTHO05D008272 2.7e-59 233.0 271 44.6
BolC1t00966H Brassica oleracea HOM05D006588 ORTHO05D008272 4.6e-59 232.3 277 44.4
MELO3C011777.2 Cucumis melo HOM05D006588 ORTHO05D008272 1.0e-58 231.1 271 44.3
BcaC09g51727 Brassica carinata HOM05D006588 ORTHO05D008272 1.1e-57 227.6 278 44.2
Ca_17389_v3 Cicer arietinum L. HOM05D006588 ORTHO05D008272 1.9e-57 226.9 282 42.9
C01p10080 Brassica napus HOM05D006588 ORTHO05D008272 9.6e-57 224.6 277 43.3
THA.LOC104814599 Tarenaya hassleriana HOM05D006588 ORTHO05D008272 6.9e-55 218.4 265 43.8
Medtr8g101930 Medicago truncatula HOM05D006588 ORTHO05D008272 2.6e-54 216.5 278 41.7
COL.COLO4_18239 Corchorus olitorius HOM05D006588 ORTHO05D008272 6.5e-53 211.8 217 49.8
Lsat_1_v5_gn_7_38040 Lactuca sativa HOM05D006588 ORTHO05D008272 1.2e-51 207.6 273 38.8
Lsat_1_v5_gn_7_38020 Lactuca sativa HOM05D006588 ORTHO05D008272 2.7e-51 206.5 273 38.5
Lsat_1_v5_gn_7_38780 Lactuca sativa HOM05D006588 ORTHO05D008272 1.0e-50 204.5 276 39.5
ATR0789G046 Amborella trichopoda HOM05D006588 ORTHO05D008272 1.1e-49 201.1 275 39.3
HanXRQChr03g0060991 Helianthus annuus HOM05D006588 ORTHO05D008272 2.2e-48 196.8 281 38.4
CDE06G2665 Ceratophyllum demersum HOM05D006588 ORTHO05D008272 4.8e-48 195.7 265 40.4
Eucgr.L03123 Eucalyptus grandis HOM05D006588 ORTHO05D008272 1.5e-46 190.7 269 42.4
Lsat_1_v5_gn_7_37981 Lactuca sativa HOM05D006588 ORTHO05D008272 4.5e-46 189.1 272 35.7
Lsat_1_v5_gn_7_38001 Lactuca sativa HOM05D006588 ORTHO05D008272 4.5e-46 189.1 272 35.7
CiPaw.03G219600 Carya illinoinensis HOM05D006588 ORTHO05D008272 5.9e-46 188.7 141 65.2
HanXRQChr03g0060681 Helianthus annuus HOM05D006588 ORTHO05D008272 1.3e-45 187.6 281 36.7
Lsat_1_v5_gn_7_38281 Lactuca sativa HOM05D006588 ORTHO05D008272 2.2e-45 186.8 282 38.7
HanXRQChr03g0060631 Helianthus annuus HOM05D006588 ORTHO05D008272 1.1e-44 184.5 271 39.1
HanXRQChr03g0060671 Helianthus annuus HOM05D006588 ORTHO05D008272 1.1e-44 184.5 282 36.2
Gohir.A06G070700 Gossypium hirsutum HOM05D006588 ORTHO05D008272 6.1e-43 178.7 141 61.7
HanXRQChr03g0061101 Helianthus annuus HOM05D006588 ORTHO05D008272 1.0e-42 177.9 275 34.9
HanXRQChr03g0060961 Helianthus annuus HOM05D006588 ORTHO05D008272 6.7e-42 175.3 277 36.5
Os01g0193500 Oryza sativa ssp. japonica HOM05D006588 ORTHO05D008272 6.3e-40 168.7 266 36.8
HPP92_003983 Vanilla planifolia HOM05D006588 ORTHO05D008272 1.1e-39 167.9 278 36.0
SEGI_25649 Sequoiadendron giganteum HOM05D006588 ORTHO05D008272 1.2e-38 164.5 278 33.8
Zm00001eb121140 Zea mays HOM05D006588 ORTHO05D008272 1.5e-38 164.1 267 36.7
HanXRQChr05g0142321 Helianthus annuus HOM05D006588 ORTHO05D008272 7.2e-36 155.2 229 40.2
Actinidia39746 Actinidia chinensis HOM05D006588 ORTHO05D008272 1.9e-28 130.6 149 45.6
Lsat_1_v5_gn_7_38181 Lactuca sativa HOM05D006588 ORTHO05D008272 7.7e-22 108.6 263 31.6
HanXRQChr03g0060651 Helianthus annuus HOM05D006588 ORTHO05D008272 6.1e-19 99.0 150 36.7
HanXRQChr03g0061001 Helianthus annuus HOM05D006588 ORTHO05D008272 1.4e-18 97.8 143 41.3
Nn7g36587 Nelumbo nucifera HOM05D006588 ORTHO05D008272 2.7e-14 83.6 51 76.5
unitig_699.g19308 Utricularia gibba HOM05D006588 ORTHO05D008272 2.7e-14 83.6 164 31.7
HanXRQChr03g0060621 Helianthus annuus HOM05D006588 ORTHO05D008272 2.2e-13 80.5 78 47.4
Pp3c2_16400 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.2e-13 80.5 248 23.8
Pp3c1_20980 Physcomitrium patens HOM05D006588 ORTHO05D008272 1.4e-10 71.2 279 20.8
Mapoly0029s0113 Marchantia polymorpha HOM05D006588 ORTHO05D008272 6.8e-10 68.9 285 21.4
Rhsim05G0031700 Rhododendron simsii HOM05D006588 ORTHO05D008272 6.8e-10 68.9 76 43.4
Pp3c10_4240 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.6e-09 67.0 248 22.6
AagrBONN_evm.TU.Sc2ySwM_228.3249 Anthoceros agrestis HOM05D006588 ORTHO05D008272 5.7e-09 65.9 101 34.7
Glyma.05G223602 Glycine max HOM05D006588 ORTHO05D008272 1.1e-07 61.6 98 38.8
Mapoly0117s0028 Marchantia polymorpha HOM05D006588 ORTHO05D008272 3.1e-07 60.1 280 21.1
Pp3c4_15950 Physcomitrium patens HOM05D006588 ORTHO05D008272 4.1e-07 59.7 248 25.8
HanXRQChr03g0060641 Helianthus annuus HOM05D006588 ORTHO05D008272 4.5e-06 56.2 63 36.5


User provided reference genes

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