Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 1.2e-62 243.0 130 100.0
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 4.0e-61 238.0 130 98.5
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 4.1e-50 201.4 130 81.5
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 7.8e-49 197.2 130 79.2
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 80.0
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 79.2
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.3e-48 195.7 130 78.5
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.3e-48 195.7 130 78.5
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 3.9e-48 194.9 130 79.2
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 8.6e-48 193.7 130 78.5
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 1.1e-47 193.4 130 78.5
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 78.5
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.5e-47 192.2 130 76.2
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 7.3e-47 190.7 130 76.2
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 7.3e-47 190.7 128 77.3
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 9.5e-47 190.3 128 76.6
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.6e-46 189.5 128 75.8
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 1.6e-46 189.5 128 75.8
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.6e-46 189.5 130 76.2
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 1.6e-46 189.5 130 75.4
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 1.6e-46 189.5 130 77.7
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 2.1e-46 189.1 130 75.4
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 2.1e-46 189.1 130 76.2
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.1e-46 189.1 128 77.3
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 2.8e-46 188.7 130 76.2
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.7e-46 188.0 130 74.6
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 75.8
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 76.6
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 6.1e-46 187.6 128 75.0
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 8.0e-46 187.2 130 75.4
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 8.0e-46 187.2 128 75.8
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.0e-45 186.8 128 75.8
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 1.0e-45 186.8 128 74.2
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.8e-45 186.0 130 76.2
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.3e-45 185.7 130 73.8
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 3.1e-45 185.3 128 74.2
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 6.8e-45 184.1 130 73.8
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 6.8e-45 184.1 130 73.8
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 6.8e-45 184.1 130 76.2
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 6.8e-45 184.1 130 72.3
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 8.9e-45 183.7 127 74.8
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.2e-44 183.3 127 75.6
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.2e-44 183.3 132 73.5
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.2e-44 183.3 130 74.6
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.2e-44 183.3 130 70.8
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.5e-44 183.0 126 74.6
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.5e-44 183.0 126 74.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 2.0e-44 182.6 128 75.0
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.0e-44 182.6 128 73.4
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 2.6e-44 182.2 128 72.7
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 3.4e-44 181.8 128 72.7
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 4.4e-44 181.4 130 71.5
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 5.8e-44 181.0 130 71.5
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 5.8e-44 181.0 128 72.7
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 5.8e-44 181.0 128 72.7
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 5.8e-44 181.0 128 74.2
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.5e-44 180.6 134 71.6
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 9.8e-44 180.3 127 73.2
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 9.8e-44 180.3 127 71.7
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.3e-43 179.9 128 71.9
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.9e-43 178.7 122 75.4
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 4.9e-43 177.9 128 71.9
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 6.4e-43 177.6 127 74.8
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 6.4e-43 177.6 130 70.8
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 8.3e-43 177.2 130 70.8
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 8.3e-43 177.2 130 70.8
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.1e-42 176.8 130 70.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.1e-42 176.8 130 70.8
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 1.1e-42 176.8 126 72.2
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.9e-42 176.0 128 71.9
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 2.4e-42 175.6 130 70.0
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 7.0e-42 174.1 128 68.8
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 7.0e-42 174.1 128 71.1
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 7.0e-42 174.1 131 73.3
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.6e-41 172.9 126 70.6
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 6.0e-41 171.0 128 69.5
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 7.8e-41 170.6 128 70.3
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.0e-40 170.2 128 68.8
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.7e-40 169.5 119 73.1
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 3.9e-40 168.3 128 66.4
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 5.0e-40 167.9 128 69.5
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 6.6e-40 167.5 121 71.9
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 1.1e-39 166.8 119 71.4
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.2e-38 163.3 122 73.0
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.6e-38 162.9 120 70.8
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.6e-38 162.9 112 75.9
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 6.2e-38 161.0 125 70.4
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.8e-37 159.5 128 66.4
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 3.1e-37 158.7 171 53.2
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 3.4e-36 155.2 136 61.0
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 4.9e-35 151.4 128 63.3
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 8.3e-35 150.6 128 62.5
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 8.3e-35 150.6 128 62.5
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 5.4e-34 147.9 103 76.7
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 3.5e-33 145.2 116 65.5
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.0e-32 143.7 185 50.3
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 3.9e-32 141.7 128 56.2
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.9e-31 139.4 98 73.5
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 4.3e-31 138.3 101 74.3
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 4.3e-31 138.3 103 69.9
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 7.3e-31 137.5 128 53.9
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 4.0e-29 131.7 98 68.4
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 5.2e-29 131.3 91 75.8
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.2e-28 130.2 91 72.5
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 3.7e-27 125.2 120 55.0
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 6.0e-25 117.9 91 65.9
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.1e-21 107.1 91 62.6
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 2.4e-21 105.9 106 58.5
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 5.2e-21 104.8 91 61.5
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 8.9e-21 104.0 71 71.8
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 1.5e-20 103.2 92 59.8
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 2.9e-19 99.0 99 47.5
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 3.2e-18 95.5 61 75.4
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 5.4e-18 94.7 65 76.9
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 7.1e-18 94.4 61 75.4
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 9.2e-18 94.0 61 72.1
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 1.7e-16 89.7 61 70.5
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 1.1e-15 87.0 61 70.5
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 4.0e-13 78.6 57 73.7
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 5.3e-13 78.2 65 60.0
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 2.6e-12 75.9 65 60.0
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 3.8e-11 72.0 117 32.5
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.9e-10 69.7 62 54.8
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 6.6e-08 61.2 115 31.3
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 1.5e-07 60.1 42 71.4
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 2.5e-07 59.3 37 81.1


User provided reference genes

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