Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 2.0e-127 459.1 241 100.0
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 8.1e-92 340.9 197 79.2
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 3.1e-91 339.0 199 78.9
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.4e-90 335.5 199 77.9
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 5.8e-90 334.7 201 78.1
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 1.7e-89 333.2 201 77.6
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.7e-89 333.2 201 77.6
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 2.2e-89 332.8 199 78.9
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.7e-89 332.0 214 72.9
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 4.9e-89 331.6 199 75.9
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 5.4e-88 328.2 200 75.5
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 2.1e-87 326.2 194 76.8
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 3.5e-87 325.5 200 75.0
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 3.5e-87 325.5 200 75.0
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 3.5e-87 325.5 194 75.8
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 6.0e-87 324.7 194 75.8
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 1.0e-86 323.9 197 76.1
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 1.3e-86 323.6 206 69.9
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 1.7e-86 323.2 199 76.4
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 1.7e-86 323.2 199 74.9
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 1.7e-86 323.2 197 73.6
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.9e-86 322.0 191 76.4
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.9e-86 322.0 191 76.4
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 5.1e-86 321.6 199 75.4
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 6.6e-86 321.2 200 74.0
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 8.6e-86 320.9 199 74.9
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 2.5e-85 319.3 200 74.0
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.3e-85 318.9 219 70.8
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 9.5e-85 317.4 200 72.0
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 1.2e-84 317.0 200 71.5
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 1.2e-84 317.0 199 75.9
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 1.1e-83 313.9 199 73.4
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.8e-83 313.2 200 71.5
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 2.3e-83 312.8 197 72.1
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 8.9e-83 310.8 200 70.5
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 1.2e-82 310.5 195 73.3
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 2.0e-82 309.7 194 72.2
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 2.0e-82 309.7 200 72.0
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 1.3e-81 307.0 197 73.1
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 4.9e-81 305.1 194 70.1
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 8.4e-81 304.3 201 70.6
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 1.4e-80 303.5 199 68.8
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 1.9e-80 303.1 199 69.3
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 7.1e-80 301.2 192 72.4
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 7.1e-80 301.2 199 68.3
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 2.7e-79 299.3 200 69.0
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 3.5e-79 298.9 199 69.8
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 4.6e-79 298.5 199 67.8
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 6.0e-79 298.1 199 68.3
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 7.8e-79 297.7 199 67.8
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 1.0e-78 297.4 199 70.9
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 1.3e-78 297.0 192 71.4
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 3.9e-78 295.4 194 69.1
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 6.6e-78 294.7 166 81.3
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 8.6e-78 294.3 199 66.8
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 8.6e-78 294.3 199 66.8
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 1.5e-77 293.5 199 68.3
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 3.3e-77 292.4 199 67.8
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 5.6e-77 291.6 199 68.3
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 9.6e-77 290.8 197 68.0
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 1.6e-76 290.0 199 65.3
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 2.8e-76 289.3 197 67.5
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 2.8e-76 289.3 192 70.8
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 2.8e-76 289.3 199 68.3
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 3.6e-76 288.9 199 67.8
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 8.1e-76 287.7 199 64.8
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 1.1e-75 287.3 169 76.9
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 1.8e-75 286.6 201 64.7
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 5.2e-75 285.0 186 67.7
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 8.9e-75 284.3 193 67.9
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.5e-74 283.5 166 77.7
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 2.0e-74 283.1 181 69.1
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 3.4e-74 282.3 194 67.5
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 1.3e-73 280.4 195 67.2
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 3.8e-73 278.9 188 66.0
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 6.4e-73 278.1 196 63.3
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 4.2e-72 275.4 197 62.9
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 9.3e-72 274.2 199 63.3
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 4.6e-71 271.9 169 71.6
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 4.6e-71 271.9 194 63.9
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 1.7e-70 270.0 167 73.1
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 1.7e-70 270.0 197 65.0
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 6.6e-70 268.1 156 78.2
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 7.3e-69 264.6 194 63.9
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 2.1e-68 263.1 163 70.6
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 2.1e-68 263.1 194 62.9
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 1.1e-67 260.8 161 70.8
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 9.0e-67 257.7 166 73.5
Rhsim01G0174600 Rhododendron simsii HOM05D000026 ORTHO05D008596 2.7e-63 246.1 199 60.3
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.5e-63 245.7 166 69.9
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 4.6e-63 245.4 200 59.5
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 1.7e-62 243.4 194 54.6
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 4.3e-61 238.8 221 52.5
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 5.6e-61 238.4 199 60.3
Hma1.2p1_0101F.1_g049146 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.0e-58 229.9 133 75.2
Hma1.2p1_2584F.1_g324890 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 2.0e-58 229.9 133 75.2
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 2.4e-56 223.0 195 52.8
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 4.6e-55 218.8 200 51.0
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 8.7e-54 214.5 199 51.8
Oeu004961.1 Olea europaea HOM05D000026 ORTHO05D008596 1.3e-52 210.7 132 65.9
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 8.1e-52 208.0 194 46.9
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 1.7e-49 200.3 192 52.6
Sabra14G0074100 Salix brachista HOM05D000026 ORTHO05D008596 6.5e-49 198.4 173 56.6
Peaxi162Scf00716g00425 Petunia axillaris HOM05D000026 ORTHO05D008596 6.0e-47 191.8 194 48.5
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 5.1e-46 188.7 107 79.4
ClCG05G000710 Citrullus lanatus HOM05D000026 ORTHO05D008596 3.6e-39 166.0 271 38.0
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 3.3e-37 159.5 218 39.0
Hma1.2p1_0101F.1_g049160 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 3.3e-37 159.5 92 76.1
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 2.4e-35 153.3 81 84.0
AUR62022739 Chenopodium quinoa HOM05D000026 ORTHO05D008596 2.1e-31 140.2 92 67.4
HPP92_015098 Vanilla planifolia HOM05D000026 ORTHO05D008596 8.2e-28 128.3 111 55.9
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 1.8e-27 127.1 77 74.0
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 6.5e-25 118.6 183 32.2
Sabra02G0139600 Salix brachista HOM05D000026 ORTHO05D008596 4.7e-23 112.5 70 70.0
PRCOL_00000497 Prasinoderma coloniale HOM05D000026 ORTHO05D008596 1.6e-15 87.4 228 30.3
Cre02.g095100 Chlamydomonas reinhardtii HOM05D000026 ORTHO05D008596 2.7e-15 86.7 135 33.3
Zm00001eb244850 Zea mays HOM05D017471 ORTHO05D012887 4.0e-14 82.8 58 58.6
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 6.7e-14 82.0 47 80.9
Zm00001eb123990 Zea mays HOM05D000026 ORTHO05D012887 1.2e-13 81.3 107 42.1
TAR636G3419 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.7e-12 77.4 82 53.7
Hund19453 Selenicereus undatus HOM05D004066 ORTHO05D008596 1.8e-11 73.9 53 62.3


User provided reference genes

Program Settings