Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 1.7e-162 575.9 281 100.0
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.0e-122 443.7 282 74.1
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 4.0e-119 431.8 282 72.7
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 3.4e-118 428.7 283 73.5
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.9e-116 422.9 282 73.0
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 1.9e-116 422.9 282 73.4
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 3.9e-114 415.2 283 70.0
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 3.9e-114 415.2 281 70.8
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 3.9e-114 415.2 284 71.1
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 5.1e-114 414.8 283 71.4
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 5.1e-114 414.8 278 71.2
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 5.1e-114 414.8 283 70.3
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 5.1e-114 414.8 283 71.0
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 5.1e-114 414.8 283 70.3
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 6.7e-114 414.5 285 70.2
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 6.7e-114 414.5 278 71.9
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 8.7e-114 414.1 283 69.6
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 8.7e-114 414.1 289 70.9
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.1e-113 413.7 283 69.3
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.1e-113 413.7 281 70.1
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 1.9e-113 412.9 279 70.3
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 3.3e-113 412.1 282 68.4
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 7.4e-113 411.0 279 70.6
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 9.6e-113 410.6 282 69.1
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 1.6e-112 409.8 248 76.6
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.1e-112 409.5 250 77.6
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 2.8e-112 409.1 283 70.7
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 4.8e-112 408.3 283 68.6
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 1.1e-111 407.1 303 66.7
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.1e-111 407.1 283 70.7
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 2.4e-111 406.0 281 68.0
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 6.9e-111 404.4 282 70.2
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 2.0e-110 402.9 279 68.5
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 2.0e-110 402.9 281 69.4
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 5.9e-110 401.4 285 69.1
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 5.9e-110 401.4 279 69.5
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 8.5e-109 397.5 283 69.3
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 8.5e-109 397.5 281 68.7
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.4e-108 396.7 278 69.4
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 1.4e-108 396.7 283 68.2
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 1.9e-108 396.4 282 67.7
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 2.5e-108 396.0 273 67.8
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 2.5e-108 396.0 272 68.0
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 7.2e-108 394.4 234 75.2
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 9.3e-108 394.0 282 67.7
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.1e-107 392.9 281 65.8
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 2.7e-107 392.5 266 68.8
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 4.6e-107 391.7 283 67.5
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.0e-106 390.6 274 66.1
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.3e-106 390.2 253 72.3
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.3e-106 390.2 280 67.1
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 2.3e-106 389.4 283 67.5
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 3.9e-106 388.7 239 74.5
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 5.1e-106 388.3 282 66.7
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 5.1e-106 388.3 279 67.0
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 5.1e-106 388.3 281 66.2
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 3.3e-105 385.6 273 66.7
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 3.3e-105 385.6 279 67.4
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 4.3e-105 385.2 282 63.8
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 7.4e-105 384.4 273 65.9
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.2e-104 382.9 286 66.4
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.2e-104 382.9 281 64.8
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 1.8e-103 379.8 283 64.0
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.5e-102 376.7 286 65.0
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 7.7e-102 374.4 281 64.4
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 2.2e-101 372.9 270 64.8
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 3.8e-101 372.1 220 76.4
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 3.8e-101 372.1 220 76.4
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 5.0e-101 371.7 278 63.7
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 6.5e-101 371.3 251 70.1
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 1.4e-100 370.2 282 64.5
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.4e-100 370.2 281 63.7
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 1.9e-100 369.8 282 66.0
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 5.5e-100 368.2 281 64.1
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 7.2e-100 367.9 281 63.7
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 7.2e-100 367.9 279 63.1
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 9.4e-100 367.5 281 63.7
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.6e-99 366.7 281 63.3
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 2.1e-99 366.3 253 66.4
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 2.1e-99 366.3 280 65.7
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 3.6e-99 365.5 220 75.5
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 3.6e-99 365.5 311 57.2
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 4.6e-99 365.2 281 63.7
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.6e-99 365.2 261 69.7
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 4.6e-99 365.2 282 64.2
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 6.1e-99 364.8 281 63.7
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 6.1e-99 364.8 281 63.3
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 6.1e-99 364.8 251 69.7
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 6.1e-99 364.8 282 64.2
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 1.4e-98 363.6 281 62.6
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 3.9e-98 362.1 248 69.4
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.5e-97 360.1 273 63.7
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 5.7e-97 358.2 303 58.4
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 9.7e-97 357.5 281 62.3
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 3.7e-96 355.5 205 77.1
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.1e-95 354.0 197 80.2
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 2.4e-95 352.8 276 61.2
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.2e-94 350.5 283 58.7
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 3.4e-94 349.0 205 74.6
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.0e-93 347.4 283 62.2
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 4.5e-86 322.0 216 67.1
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 7.2e-84 314.7 207 68.1
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 6.1e-83 311.6 272 57.4
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 6.1e-83 311.6 275 55.6
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 2.5e-76 289.7 208 65.4
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 3.2e-76 289.3 209 66.5
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 4.2e-76 288.9 205 65.9
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 9.4e-76 287.7 272 52.2
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.5e-73 280.4 204 59.8
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.4e-71 273.9 271 50.9
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.6e-70 270.4 253 49.8
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 7.7e-70 268.1 263 50.2
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 4.2e-68 262.3 204 58.3
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 1.1e-63 247.7 245 55.1
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.8e-63 246.9 144 79.2
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 4.9e-56 222.2 234 46.6
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 6.4e-56 221.9 172 57.6
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 4.7e-51 205.7 282 44.7
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 4.7e-51 205.7 176 59.7
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 1.9e-47 193.7 150 65.3
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 1.1e-44 184.5 169 56.2
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 3.0e-29 133.3 83 72.3
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 1.8e-26 124.0 136 47.8
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 3.1e-18 96.7 56 76.8
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.3e-11 74.7 123 38.2


User provided reference genes

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