Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 1.0e-194 683.3 377 100.0
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 2.7e-86 323.2 403 52.4
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.9e-84 317.0 291 63.6
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.9e-84 317.0 389 52.7
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 2.5e-84 316.6 389 52.4
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 7.4e-84 315.1 284 63.7
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 6.3e-83 312.0 397 51.1
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 1.9e-79 300.4 315 56.8
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 3.6e-78 296.2 398 51.8
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 7.9e-78 295.0 301 59.1
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.0e-77 294.7 416 48.1
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 5.1e-77 292.4 386 51.0
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 1.5e-76 290.8 288 58.3
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.7e-75 287.3 302 57.0
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 4.8e-75 285.8 313 56.9
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 9.1e-74 281.6 302 56.3
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.2e-73 281.2 317 53.9
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 1.0e-72 278.1 284 56.3
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 1.9e-71 273.9 313 52.4
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 4.2e-71 272.7 314 53.5
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 1.6e-70 270.8 283 56.5
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 6.1e-70 268.9 298 54.0
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.5e-68 264.2 403 46.2
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 3.3e-68 263.1 297 55.2
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 3.3e-68 263.1 291 55.0
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 7.4e-68 261.9 313 51.8
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 1.3e-67 261.2 280 55.4
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 2.8e-67 260.0 285 52.3
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 2.8e-67 260.0 321 50.2
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 2.8e-67 260.0 403 44.9
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 6.3e-67 258.8 388 49.0
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 8.2e-67 258.5 300 52.3
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 1.1e-66 258.1 313 52.4
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 7.0e-66 255.4 331 51.1
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 7.0e-66 255.4 353 49.3
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 2.0e-65 253.8 274 55.1
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 7.7e-65 251.9 317 50.8
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 1.7e-64 250.8 319 51.7
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 2.1e-62 243.8 287 53.0
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 2.7e-62 243.4 404 46.3
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 2.7e-62 243.4 296 52.0
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 2.7e-62 243.4 295 49.5
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 8.0e-62 241.9 319 49.5
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 1.0e-61 241.5 403 46.9
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 6.7e-61 238.8 277 51.6
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 5.7e-60 235.7 286 50.3
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 4.8e-59 232.6 210 63.8
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 6.3e-59 232.3 382 44.2
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 8.2e-59 231.9 314 48.1
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 1.8e-58 230.7 319 49.5
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 2.7e-57 226.9 280 47.5
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 3.5e-57 226.5 383 43.9
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 2.2e-56 223.8 385 44.7
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 2.9e-56 223.4 353 47.6
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 8.5e-56 221.9 297 49.8
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 5.5e-55 219.2 276 48.9
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 5.5e-55 219.2 276 48.9
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 7.2e-55 218.8 310 47.4
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 9.4e-55 218.4 307 46.3
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 4.0e-53 213.0 280 47.1
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 1.5e-52 211.1 353 44.2
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 5.7e-52 209.1 353 43.9
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 7.5e-52 208.8 279 47.3
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 2.2e-51 207.2 280 47.5
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 2.2e-51 207.2 395 39.0
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 4.1e-50 203.0 318 44.7
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 4.5e-49 199.5 173 68.2
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 7.7e-49 198.7 313 42.2
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 7.7e-49 198.7 313 42.2
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 1.3e-48 198.0 274 45.3
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 1.7e-48 197.6 274 45.3
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 3.8e-48 196.4 285 43.9
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 1.1e-47 194.9 342 40.1
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.5e-47 194.5 153 73.2
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 1.9e-47 194.1 328 40.9
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 3.2e-47 193.4 318 42.5
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 1.6e-46 191.0 313 45.0
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 1.4e-45 188.0 214 55.6
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 6.8e-45 185.7 320 43.8
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 5.7e-44 182.6 172 64.0
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 9.8e-44 181.8 280 43.9
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 9.8e-44 181.8 329 41.6
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 9.8e-44 181.8 314 41.7
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 1.3e-43 181.4 309 43.0
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 1.8e-42 177.6 334 41.9
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 7.0e-42 175.6 212 53.8
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 7.8e-41 172.2 194 49.5
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 5.0e-40 169.5 306 39.2
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 1.9e-39 167.5 297 37.4
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 1.9e-39 167.5 324 39.5
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 5.6e-39 166.0 388 34.8
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 2.1e-38 164.1 172 52.9
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 6.1e-38 162.5 180 52.8
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 1.5e-36 157.9 312 38.1
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 2.0e-36 157.5 214 42.5
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 5.0e-32 142.9 187 49.2
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 1.1e-31 141.7 404 33.7
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 4.0e-29 133.3 303 37.3
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 1.5e-23 114.8 328 32.6
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 8.9e-21 105.5 223 38.1
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 6.0e-17 92.8 143 47.6
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 7.3e-15 85.9 108 53.7
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 4.7e-14 83.2 68 64.7
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 3.4e-12 77.0 112 50.9
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 4.4e-12 76.6 101 48.5
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 7.6e-12 75.9 216 30.1
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 1.2e-09 68.6 93 45.2
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 2.7e-09 67.4 43 65.1


User provided reference genes

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