Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 8.9e-102 373.6 192 100.0
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 1.9e-67 259.6 192 68.8
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 2.5e-67 259.2 192 69.8
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 3.2e-67 258.8 192 67.7
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 5.5e-67 258.1 194 67.0
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 1.2e-66 256.9 192 67.7
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 2.1e-66 256.1 194 67.0
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 3.5e-66 255.4 192 68.2
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 6.0e-66 254.6 194 67.0
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 6.0e-66 254.6 191 67.5
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 1.8e-65 253.1 194 66.0
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 3.9e-65 251.9 193 65.8
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 8.7e-65 250.8 193 65.3
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 2.5e-64 249.2 192 67.7
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 9.7e-64 247.3 193 68.4
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.6e-63 246.5 193 64.8
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 1.1e-62 243.8 192 65.6
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 1.4e-62 243.4 189 66.7
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.4e-62 243.4 194 66.0
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.4e-62 243.4 192 65.1
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 2.4e-62 242.7 194 65.5
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 2.4e-62 242.7 192 66.1
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 4.1e-62 241.9 193 63.7
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 9.0e-62 240.7 192 64.1
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 5.9e-61 238.0 193 64.8
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 1.0e-60 237.3 188 64.9
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 1.7e-60 236.5 191 61.3
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 1.7e-60 236.5 188 66.0
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 2.2e-60 236.1 189 65.6
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 2.9e-60 235.7 192 59.4
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 3.8e-60 235.3 192 61.5
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 5.0e-60 235.0 185 64.9
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 6.5e-60 234.6 193 63.2
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 8.5e-60 234.2 165 72.7
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 8.5e-60 234.2 188 63.8
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 1.4e-59 233.4 193 63.7
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.9e-59 233.0 191 61.3
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 1.9e-59 233.0 185 65.9
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 2.5e-59 232.6 204 61.8
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 3.2e-59 232.3 184 62.0
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 5.5e-59 231.5 187 63.6
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 5.5e-59 231.5 168 67.9
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 5.5e-59 231.5 192 63.0
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.2e-58 230.3 193 62.7
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 1.6e-58 229.9 188 60.6
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 3.6e-58 228.8 166 68.7
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 6.1e-58 228.0 188 62.2
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 7.9e-58 227.6 176 67.6
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 7.9e-58 227.6 189 63.5
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 1.4e-57 226.9 187 58.3
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 1.8e-57 226.5 154 75.3
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 1.8e-57 226.5 187 58.3
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 2.3e-57 226.1 188 63.8
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 6.7e-57 224.6 193 60.1
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 6.7e-57 224.6 190 62.6
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 1.1e-56 223.8 192 58.9
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 1.5e-56 223.4 189 63.5
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 2.5e-56 222.6 183 63.4
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.5e-56 222.6 154 71.4
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 4.3e-56 221.9 194 61.3
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 9.7e-56 220.7 191 57.6
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 1.3e-55 220.3 192 57.8
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 1.3e-55 220.3 182 60.4
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 1.7e-55 219.9 202 59.4
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.7e-55 219.9 186 62.4
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 2.2e-55 219.5 159 71.7
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 2.2e-55 219.5 192 57.8
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 4.8e-55 218.4 215 54.4
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 6.3e-55 218.0 159 71.1
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 1.4e-54 216.9 191 56.5
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 1.8e-54 216.5 193 57.5
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 3.1e-54 215.7 160 68.1
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 3.1e-54 215.7 163 65.6
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 5.3e-54 214.9 163 64.4
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 6.9e-54 214.5 197 59.9
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 9.1e-54 214.2 156 69.9
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 2.0e-53 213.0 221 54.8
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 4.5e-53 211.8 189 56.1
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 1.0e-52 210.7 181 63.5
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 1.7e-52 209.9 164 64.0
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 1.9e-51 206.5 160 63.1
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 4.2e-51 205.3 155 66.5
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 1.0e-49 200.7 160 65.0
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 2.3e-49 199.5 151 68.9
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 5.1e-49 198.4 148 69.6
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 1.5e-48 196.8 194 57.7
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 2.0e-48 196.4 139 72.7
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 3.3e-48 195.7 177 58.8
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 3.3e-48 195.7 177 58.8
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 2.8e-47 192.6 147 66.7
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 4.1e-46 188.7 126 76.2
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 4.5e-45 185.3 143 65.7
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.9e-44 182.6 181 52.5
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-43 180.6 159 60.4
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 1.4e-43 180.3 134 72.4
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 5.5e-43 178.3 111 80.2
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 9.4e-43 177.6 120 70.0
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 3.0e-41 172.6 194 49.0
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 3.0e-41 172.6 125 72.0
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 1.1e-40 170.6 125 70.4
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.3e-39 167.2 133 62.4
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 3.7e-39 165.6 186 48.4
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 1.1e-38 164.1 174 54.0
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 6.5e-36 154.8 122 68.9
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 1.5e-35 153.7 124 62.9
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 3.2e-35 152.5 124 65.3
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 8.2e-31 137.9 107 62.6
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 7.0e-30 134.8 166 45.2
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 9.1e-30 134.4 102 63.7
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.7e-26 122.9 153 44.4
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 1.2e-24 117.5 131 49.6
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 2.0e-24 116.7 141 48.9
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 8.9e-17 91.3 113 41.6
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 7.0e-14 81.6 129 38.8
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 7.3e-11 71.6 61 50.8
C06p23580 Brassica napus HOM05D002744 ORTHO05D008989 1.2e-10 70.9 53 60.4
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 3.2e-06 56.2 50 54.0


User provided reference genes

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