Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2911 Cannabis sativa HOM05D008383 ORTHO05D010186 1.4e-34 149.1 73 100.0
RcHm_v2.0_Chr2g0141731 Rosa chinensis HOM05D008383 ORTHO05D010186 1.1e-15 86.3 69 68.1
MD17G1179900 Malus domestica HOM05D008383 ORTHO05D010186 1.4e-15 85.9 64 68.8
Prupe.3G074000 Prunus persica HOM05D008383 ORTHO05D010186 1.9e-12 75.5 58 65.5
FvH4_6g32710 Fragaria vesca HOM05D008383 ORTHO05D010186 3.3e-12 74.7 69 62.3
FAN02G1950 Fragaria x ananassa HOM05D008383 ORTHO05D010186 7.3e-12 73.6 69 60.9
MD09G1198900 Malus domestica HOM05D008383 ORTHO05D010186 9.5e-12 73.2 55 67.3
FAN05G1942 Fragaria x ananassa HOM05D008383 ORTHO05D010186 1.2e-11 72.8 69 59.4
Haze_15885 Corylus avellana HOM05D008383 ORTHO05D010186 4.7e-11 70.9 70 55.7
Haze_15886 Corylus avellana HOM05D008383 ORTHO05D010186 6.1e-11 70.5 70 54.3
Prupe.6G069400 Prunus persica HOM05D008383 ORTHO05D010186 6.1e-11 70.5 61 60.7
Haze_15884 Corylus avellana HOM05D008383 ORTHO05D010186 8.0e-11 70.1 70 54.3
Haze_15879 Corylus avellana HOM05D008383 ORTHO05D010186 4.0e-10 67.8 71 53.5
Medtr2g100440 Medicago truncatula HOM05D008383 ORTHO05D010186 1.3e-08 62.8 65 50.8
CiPaw.01G229300 Carya illinoinensis HOM05D008383 ORTHO05D010186 2.2e-08 62.0 69 52.2
CiPaw.02G144300 Carya illinoinensis HOM05D008383 ORTHO05D010186 2.2e-08 62.0 65 47.7
Dinv30420 Davidia involucrata HOM05D008383 ORTHO05D010186 2.9e-08 61.6 67 55.2
Potri.001G172850 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.1e-07 59.7 74 48.6
Sabra03G0035400 Salix brachista HOM05D008383 ORTHO05D010186 1.1e-07 59.7 72 48.6
CiPaw.01G228700 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.4e-07 59.3 56 51.8
CiPaw.01G229000 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.4e-07 59.3 68 48.5
CiPaw.01G229400 Carya illinoinensis HOM05D008383 ORTHO05D010186 1.4e-07 59.3 68 48.5
Potri.003G061200 Populus trichocarpa HOM05D008383 ORTHO05D010186 1.4e-07 59.3 72 51.4
DCAR_007598 Daucus carota HOM05D008383 ORTHO05D010186 3.2e-07 58.2 72 41.7
Potri.003G061000 Populus trichocarpa HOM05D008383 ORTHO05D010186 3.2e-07 58.2 62 54.8
Manes.11G030500 Manihot esculenta HOM05D008383 ORTHO05D010186 7.0e-07 57.0 62 50.0
MD09G1199000 Malus domestica HOM05D008383 ORTHO05D010186 1.2e-06 56.2 56 51.8
COL.COLO4_30545 Corchorus olitorius HOM05D008383 ORTHO05D010186 1.6e-06 55.8 74 39.2
Migut.I00966 Erythranthe guttata HOM05D008383 ORTHO05D010186 2.7e-06 55.1 61 52.5
THA.LOC104810546 Tarenaya hassleriana HOM05D012542 ORTHO05D010186 2.7e-06 55.1 67 43.3
Hma1.2p1_0764F.1_g215000 Hydrangea macrophylla HOM05D008383 ORTHO05D010186 6.0e-06 53.9 71 49.3
ClCG09G000350 Citrullus lanatus HOM05D008383 ORTHO05D010186 7.8e-06 53.5 68 44.1
Rhsim12G0204000 Rhododendron simsii HOM05D008383 ORTHO05D010186 7.8e-06 53.5 55 56.4
Thecc.06G103000 Theobroma cacao HOM05D008383 ORTHO05D010186 7.8e-06 53.5 64 43.8


User provided reference genes

Program Settings