Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 4.1e-64 248.1 138 100.0
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 4.7e-12 75.1 117 41.9
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 4.0e-11 72.0 60 65.0
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 4.0e-11 72.0 53 73.6
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 4.0e-11 72.0 59 67.8
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 5.2e-11 71.6 55 69.1
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 8.9e-11 70.9 58 65.5
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 8.9e-11 70.9 58 65.5
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.2e-10 70.5 110 45.5
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.5e-10 70.1 60 65.0
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.0e-10 69.7 55 70.9
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 2.6e-10 69.3 59 64.4
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 2.6e-10 69.3 48 75.0
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.4e-10 68.9 56 66.1
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 5.8e-10 68.2 46 76.1
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 5.8e-10 68.2 46 76.1
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 1.3e-09 67.0 118 45.8
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 1.3e-09 67.0 64 57.8
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 1.7e-09 66.6 111 43.2
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 2.9e-09 65.9 55 65.5
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 3.7e-09 65.5 52 69.2
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 4.9e-09 65.1 82 53.7
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 6.4e-09 64.7 48 70.8
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 8.3e-09 64.3 52 67.3
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 1.4e-08 63.5 148 35.1
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 1.4e-08 63.5 45 75.6
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 1.9e-08 63.2 62 61.3
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 2.4e-08 62.8 55 65.5
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 2.4e-08 62.8 52 65.4
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 2.4e-08 62.8 52 67.3
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 2.4e-08 62.8 54 66.7
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 3.2e-08 62.4 53 64.2
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 3.2e-08 62.4 46 71.7
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 3.2e-08 62.4 59 62.7
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 4.1e-08 62.0 134 39.6
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 5.4e-08 61.6 58 63.8
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 5.4e-08 61.6 58 63.8
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 5.4e-08 61.6 43 74.4
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 5.4e-08 61.6 43 74.4
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 9.2e-08 60.8 85 45.9
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 9.2e-08 60.8 52 63.5
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 1.2e-07 60.5 51 68.6
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 1.2e-07 60.5 52 63.5
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 1.2e-07 60.5 53 60.4
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.6e-07 60.1 59 59.3
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 1.6e-07 60.1 48 68.8
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 1.6e-07 60.1 46 69.6
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 2.1e-07 59.7 40 80.0
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.1e-07 59.7 61 60.7
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.1e-07 59.7 58 62.1
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 2.1e-07 59.7 46 69.6
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.1e-07 59.7 48 68.8
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.7e-07 59.3 131 36.6
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 2.7e-07 59.3 58 63.8
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 2.7e-07 59.3 56 55.4
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 2.7e-07 59.3 50 64.0
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 2.7e-07 59.3 52 63.5
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 3.5e-07 58.9 38 81.6
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 3.5e-07 58.9 36 83.3
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 4.6e-07 58.5 48 70.8
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 4.6e-07 58.5 48 66.7
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 4.6e-07 58.5 49 67.3
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 6.0e-07 58.2 62 58.1
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 6.0e-07 58.2 43 72.1
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 7.8e-07 57.8 61 60.7
Glyma.04G134200 Glycine max HOM05D002974 ORTHO05D002992 7.8e-07 57.8 58 62.1
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 7.8e-07 57.8 52 59.6
DCAR_025326 Daucus carota HOM05D002974 ORTHO05D002992 1.0e-06 57.4 44 68.2
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 1.3e-06 57.0 41 78.0
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 1.3e-06 57.0 62 56.5
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 1.3e-06 57.0 53 67.9
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 1.3e-06 57.0 54 63.0
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 1.7e-06 56.6 53 67.9
Os01g0808900 Oryza sativa ssp. japonica HOM05D002974 ORTHO05D002992 1.7e-06 56.6 39 71.8
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 1.7e-06 56.6 42 66.7
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 2.3e-06 56.2 52 63.5
EL10Ac2g02772 Beta vulgaris HOM05D012416 ORTHO05D002992 2.3e-06 56.2 56 57.1
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 2.3e-06 56.2 46 67.4
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 2.3e-06 56.2 121 37.2
Phvul.005G024800 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 2.3e-06 56.2 66 59.1
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 2.3e-06 56.2 52 69.2
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 3.9e-06 55.5 51 62.7
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 3.9e-06 55.5 63 54.0
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 5.1e-06 55.1 129 38.0
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 5.1e-06 55.1 47 61.7
Os05g0390800 Oryza sativa ssp. japonica HOM05D002974 ORTHO05D002992 5.1e-06 55.1 52 55.8
Sc11g0006360 Simmondsia chinensis HOM05D002974 ORTHO05D002992 5.1e-06 55.1 52 59.6
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 5.1e-06 55.1 34 85.3
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 5.1e-06 55.1 92 44.6
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 6.6e-06 54.7 43 74.4
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 6.6e-06 54.7 39 71.8
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 8.6e-06 54.3 48 72.9
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 8.6e-06 54.3 46 60.9
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 8.6e-06 54.3 74 45.9
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 8.6e-06 54.3 74 45.9
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 8.6e-06 54.3 62 58.1
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 8.6e-06 54.3 60 51.7
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 8.6e-06 54.3 49 65.3
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 8.6e-06 54.3 67 47.8


User provided reference genes

Program Settings