Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2677 Cannabis sativa HOM05D006741 ORTHO05D008434 1.2e-294 1015.8 520 100.0
Cfa003646 Carpinus fangiana HOM05D006741 ORTHO05D008434 2.8e-118 429.9 521 49.7
QL05p019947 Quercus lobata HOM05D006741 ORTHO05D008434 1.6e-116 424.1 518 48.3
CiPaw.01G231300 Carya illinoinensis HOM05D006741 ORTHO05D008434 6.1e-113 412.1 519 48.2
Thecc.06G100200 Theobroma cacao HOM05D006741 ORTHO05D008434 5.7e-111 405.6 523 48.6
COL.COLO4_30514 Corchorus olitorius HOM05D006741 ORTHO05D008434 8.3e-110 401.7 522 48.1
Manes.11G033400 Manihot esculenta HOM05D006741 ORTHO05D008434 1.4e-109 401.0 529 47.1
Haze_15849 Corylus avellana HOM05D006741 ORTHO05D008434 1.9e-106 390.6 444 51.4
Duzib235G1269 Durio zibethinus HOM05D006741 ORTHO05D008434 4.3e-106 389.4 522 47.5
Actinidia09006 Actinidia chinensis HOM05D006741 ORTHO05D008434 6.2e-105 385.6 515 45.0
Prupe.3G058900 Prunus persica HOM05D006741 ORTHO05D008434 1.8e-104 384.0 527 48.0
CSS0034583 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 2.6e-103 380.2 518 46.1
CSS0005978 Camellia sinensis var. sinensis HOM05D006741 ORTHO05D008434 7.5e-103 378.6 518 45.9
MD17G1183900 Malus domestica HOM05D006741 ORTHO05D008434 8.3e-102 375.2 527 46.5
Potri.013G040800 Populus trichocarpa HOM05D006741 ORTHO05D008434 8.3e-102 375.2 518 46.5
Atru.chr1.3525 Acer truncatum HOM05D006741 ORTHO05D008434 5.4e-101 372.5 520 46.0
Cpa.g.sc25.10 Carica papaya HOM05D006741 ORTHO05D008434 1.0e-99 368.2 530 45.1
MD09G1202700 Malus domestica HOM05D006741 ORTHO05D008434 5.0e-99 365.9 525 45.9
TWI75G1374 Tripterygium wilfordii HOM05D006741 ORTHO05D008434 6.6e-99 365.5 516 45.0
Dinv30435 Davidia involucrata HOM05D006741 ORTHO05D008434 1.9e-98 364.0 491 45.2
TAR636G1866 Trochodendron aralioides HOM05D006741 ORTHO05D008434 7.3e-98 362.1 521 45.5
Sabra05G0046800 Salix brachista HOM05D006741 ORTHO05D008434 2.1e-97 360.5 519 44.9
Duzib192G0766 Durio zibethinus HOM05D006741 ORTHO05D008434 8.1e-97 358.6 522 44.8
Actinidia39136 Actinidia chinensis HOM05D006741 ORTHO05D008434 3.1e-96 356.7 515 44.1
Potri.005G053300 Populus trichocarpa HOM05D006741 ORTHO05D008434 2.9e-94 350.1 516 46.1
Sabra13G0037700 Salix brachista HOM05D006741 ORTHO05D008434 1.4e-93 347.8 522 43.7
Rhsim08G0227700 Rhododendron simsii HOM05D006741 ORTHO05D008434 1.7e-91 340.9 521 44.3
Gohir.A06G189500 Gossypium hirsutum HOM05D006741 ORTHO05D008434 4.3e-90 336.3 529 43.5
PGR102G3207 Punica granatum HOM05D006741 ORTHO05D008434 2.3e-88 330.5 539 41.6
Lalb_Chr01g0013161 Lupinus albus HOM05D006741 ORTHO05D008434 1.5e-87 327.8 518 42.3
arahy.Tifrunner.gnm1.ann1.X4D5DL Arachis hypogaea HOM05D006741 ORTHO05D008434 2.6e-87 327.0 470 43.2
arahy.Tifrunner.gnm1.ann1.CS2PXA Arachis hypogaea HOM05D006741 ORTHO05D008434 3.4e-87 326.6 466 44.0
Gorai.010G230700 Gossypium raimondii HOM05D006741 ORTHO05D008434 3.4e-87 326.6 529 42.7
vmacro17014 Vaccinium macrocarpon HOM05D006741 ORTHO05D008434 1.7e-86 324.3 457 44.2
Gohir.D06G197900 Gossypium hirsutum HOM05D006741 ORTHO05D008434 3.7e-86 323.2 529 42.7
Sed0020930 Sechium edule HOM05D006741 ORTHO05D008434 1.1e-85 321.6 534 40.8
MELO3C013001.2 Cucumis melo HOM05D006741 ORTHO05D008434 4.1e-85 319.7 565 40.0
Nn6g35322 Nelumbo nucifera HOM05D006741 ORTHO05D008434 1.6e-84 317.8 527 42.1
ClCG07G013320 Citrullus lanatus HOM05D006741 ORTHO05D008434 1.0e-83 315.1 576 38.7
CsaV3_3G023590 Cucumis sativus L. HOM05D006741 ORTHO05D008434 2.3e-83 313.9 500 42.2
FAN14G5382 Fragaria x ananassa HOM05D006741 ORTHO05D008434 1.6e-81 307.8 516 43.0
RcHm_v2.0_Chr2g0140551 Rosa chinensis HOM05D006741 ORTHO05D008434 3.6e-81 306.6 517 43.1
DCAR_023081 Daucus carota HOM05D006741 ORTHO05D008434 1.1e-80 305.1 522 39.5
Oeu017120.1 Olea europaea HOM05D006741 ORTHO05D008434 2.4e-80 303.9 521 40.3
Eucgr.J02937 Eucalyptus grandis HOM05D006741 ORTHO05D008434 6.8e-80 302.4 428 44.2
Ciclev10027417m.g Citrus clementina HOM05D006741 ORTHO05D008434 7.6e-79 298.9 517 41.6
Lj3g0008384 Lotus japonicus HOM05D006741 ORTHO05D008434 7.6e-79 298.9 466 42.7
FAN05G1069 Fragaria x ananassa HOM05D006741 ORTHO05D008434 2.9e-78 297.0 515 42.5
MSTRG.11026 Avicennia marina HOM05D006741 ORTHO05D008434 6.4e-78 295.8 517 38.1
FvH4_6g32410 Fragaria vesca HOM05D006741 ORTHO05D008434 1.9e-77 294.3 516 41.9
Cc04_g02540 Coffea canephora HOM05D006741 ORTHO05D008434 1.6e-76 291.2 532 39.8
Sc12g0010170 Simmondsia chinensis HOM05D006741 ORTHO05D008434 1.6e-76 291.2 526 40.1
PSO210G6928 Papaver somniferum HOM05D006741 ORTHO05D008434 1.7e-75 287.7 522 40.2
FAN02G4526 Fragaria x ananassa HOM05D006741 ORTHO05D008434 3.0e-75 287.0 514 41.4
PSO210G4778 Papaver somniferum HOM05D006741 ORTHO05D008434 2.8e-73 280.4 516 39.7
Ca_23263_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.6e-71 273.9 470 41.5
Ca_23272_v3 Cicer arietinum L. HOM05D006741 ORTHO05D008434 2.6e-71 273.9 470 41.5
Psat4g197400 Pisum sativum HOM05D006741 ORTHO05D008434 1.3e-70 271.6 466 40.3
GSVIVG01016979001 Vitis vinifera HOM05D006741 ORTHO05D008434 1.3e-70 271.6 513 37.8
Medtr8g014490 Medicago truncatula HOM05D006741 ORTHO05D008434 1.4e-69 268.1 466 41.2
Glyma.08G200900 Glycine max HOM05D006741 ORTHO05D008434 7.1e-69 265.8 449 41.4
Aqoxy7G03978 Aquilegia oxysepala HOM05D006741 ORTHO05D008434 1.2e-68 265.0 521 38.0
TPR.G26946 Trifolium pratense HOM05D006741 ORTHO05D008434 1.2e-68 265.0 503 37.4
Migut.I00896 Erythranthe guttata HOM05D006741 ORTHO05D008434 4.6e-68 263.1 513 37.2
Phvul.010G145200 Phaseolus vulgaris HOM05D006741 ORTHO05D008434 1.3e-67 261.5 477 39.4
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 5.1e-67 259.6 497 40.6
SGA_v2.0_scaffold69G23318 Striga asiatica HOM05D006741 ORTHO05D008434 6.6e-67 259.2 520 37.1
VMungo0331G0583 Vigna mungo HOM05D006741 ORTHO05D008434 6.6e-67 259.2 462 40.5
MBI01_g10133_MAGBIO Magnolia biondii HOM05D006741 ORTHO05D008434 7.4e-66 255.8 511 38.4
THA.LOC104806335 Tarenaya hassleriana HOM05D006741 ORTHO05D008434 1.8e-64 251.1 485 36.9
Nitab4.5_0001172g0120 Nicotiana tabacum HOM05D006741 ORTHO05D008434 5.3e-64 249.6 554 37.7
Glyma.07G015400 Glycine max HOM05D006741 ORTHO05D008434 6.9e-64 249.2 447 39.8
Lj9A513G60 Lonicera japonica HOM05D006741 ORTHO05D008434 1.3e-62 245.0 470 39.1
ClCG00G003340 Citrullus lanatus HOM05D006741 ORTHO05D008434 1.1e-61 241.9 453 37.7
AUR62031924 Chenopodium quinoa HOM05D006741 ORTHO05D008434 1.4e-61 241.5 512 37.7
EL10Ac3g05317 Beta vulgaris HOM05D006741 ORTHO05D008434 2.4e-61 240.7 519 35.5
Hund28870 Selenicereus undatus HOM05D006741 ORTHO05D008434 4.2e-61 240.0 515 37.5
AT4G12540 Arabidopsis thaliana HOM05D006741 ORTHO05D008434 1.2e-60 238.4 476 37.8
Carub.0006s3171 Capsella rubella HOM05D006741 ORTHO05D008434 1.2e-60 238.4 467 36.0
Thhalv10028639m.g Eutrema salsugineum HOM05D006741 ORTHO05D008434 6.7e-59 232.6 501 34.9
Hund28829 Selenicereus undatus HOM05D006741 ORTHO05D008434 8.7e-59 232.3 518 37.1
Solyc12g044620.2 Solanum lycopersicum HOM05D006741 ORTHO05D008434 2.5e-58 230.7 571 34.2
PGSC0003DMG400026441 Solanum tuberosum HOM05D006741 ORTHO05D008434 9.6e-58 228.8 518 35.5
HanXRQChr09g0276261 Helianthus annuus HOM05D006741 ORTHO05D008434 3.7e-57 226.9 524 35.3
Ah.01g005790 Amaranthus hybridus HOM05D006741 ORTHO05D008434 4.8e-57 226.5 519 36.2
AL6G47480 Arabidopsis lyrata HOM05D006741 ORTHO05D008434 6.2e-57 226.1 482 35.9
Sopen12g023080 Solanum pennellii HOM05D006741 ORTHO05D008434 1.2e-55 221.9 571 33.8
Aa31LG9G10130 Aethionema arabicum HOM05D006741 ORTHO05D008434 1.5e-55 221.5 475 35.8
Nitab4.5_0004241g0050 Nicotiana tabacum HOM05D006741 ORTHO05D008434 2.6e-55 220.7 547 34.6
Sp6g04980 Schrenkiella parvula HOM05D006741 ORTHO05D008434 7.6e-55 219.2 505 32.9
SpUn0055_0020 Schrenkiella parvula HOM05D006741 ORTHO05D008434 7.6e-55 219.2 480 33.8
Peaxi162Scf00177g00125 Petunia axillaris HOM05D006741 ORTHO05D008434 6.5e-54 216.1 469 36.5
CARHR253650 Cardamine hirsuta HOM05D006741 ORTHO05D008434 8.4e-54 215.7 475 34.7
Nn8g39070 Nelumbo nucifera HOM05D006741 ORTHO05D008434 3.2e-53 213.8 384 38.0
ECA232G4726 Erigeron canadensis HOM05D006741 ORTHO05D008434 7.1e-53 212.6 516 35.9
Lsat_1_v5_gn_4_97420 Lactuca sativa HOM05D006741 ORTHO05D008434 1.6e-52 211.5 539 32.1
Hma1.2p1_0430F.1_g151390 Hydrangea macrophylla HOM05D006741 ORTHO05D008434 7.9e-52 209.1 516 34.1
A09p26830 Brassica napus HOM05D006741 ORTHO05D008434 1.1e-50 205.3 475 34.9
BraA09t38254Z Brassica rapa HOM05D006741 ORTHO05D008434 1.5e-47 194.9 482 34.0
BcaC04g21238 Brassica carinata HOM05D006741 ORTHO05D008434 7.6e-47 192.6 463 35.4
C09p34000 Brassica napus HOM05D006741 ORTHO05D008434 7.6e-47 192.6 463 35.4
BolC9t56238H Brassica oleracea HOM05D006741 ORTHO05D008434 7.6e-47 192.6 463 35.4
CDE02G1085 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 2.7e-44 184.1 512 30.3
ATR0705G093 Amborella trichopoda HOM05D006741 ORTHO05D008434 2.7e-36 157.5 404 32.7
Dinv37976 Davidia involucrata HOM05D006741 ORTHO05D008434 7.9e-36 156.0 257 40.1
Os05g0532500 Oryza sativa ssp. japonica HOM05D006741 ORTHO05D008434 4.1e-32 143.7 480 28.1
Cpa.g.sc25.28 Carica papaya HOM05D006741 ORTHO05D008434 9.1e-32 142.5 303 35.0
TAR624G0518 Trochodendron aralioides HOM05D006741 ORTHO05D008434 2.7e-28 131.0 236 37.3
CDE04G0136 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 4.4e-18 97.1 230 33.0
BcaC01g04588 Brassica carinata HOM05D006741 ORTHO05D008434 1.3e-17 95.5 288 31.9
unitig_748.g7441 Utricularia gibba HOM05D006741 ORTHO05D008434 8.2e-17 92.8 217 31.8
Zm00001eb353790 Zea mays HOM05D006741 ORTHO05D008434 5.9e-15 86.7 531 24.7
unitig_748.g7440 Utricularia gibba HOM05D006741 ORTHO05D008434 7.2e-13 79.7 173 37.6
Actinidia32099 Actinidia chinensis HOM05D006741 ORTHO05D008434 8.0e-12 76.3 163 35.0
CDE04G1568 Ceratophyllum demersum HOM05D006741 ORTHO05D008434 8.0e-12 76.3 105 41.0
ECA234G0697 Erigeron canadensis HOM05D006741 ORTHO05D008434 3.1e-08 64.3 151 36.4
C03p36010 Brassica napus HOM05D006741 ORTHO05D008434 2.9e-06 57.8 75 48.0
BolC3t15911H Brassica oleracea HOM05D006741 ORTHO05D008434 2.9e-06 57.8 75 48.0


User provided reference genes

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