Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2670 Cannabis sativa HOM05D005662 ORTHO05D007004 8.8e-128 460.3 233 100.0
Actinidia25029 Actinidia chinensis HOM05D005662 ORTHO05D007004 3.5e-92 342.0 224 73.7
COL.COLO4_14166 Corchorus olitorius HOM05D005662 ORTHO05D007004 6.0e-92 341.3 234 70.5
TWI39G1176 Tripterygium wilfordii HOM05D005662 ORTHO05D007004 7.8e-92 340.9 232 70.7
Potri.012G128500 Populus trichocarpa HOM05D005662 ORTHO05D007004 1.5e-90 336.7 233 70.4
Nitab4.5_0000072g0480 Nicotiana tabacum HOM05D005662 ORTHO05D007004 4.3e-90 335.1 228 69.7
Potri.015G129900 Populus trichocarpa HOM05D005662 ORTHO05D007004 7.3e-90 334.3 228 71.5
MD07G1257000 Malus domestica HOM05D005662 ORTHO05D007004 1.2e-89 333.6 232 72.4
Gorai.001G237900 Gossypium raimondii HOM05D005662 ORTHO05D007004 4.7e-89 331.6 233 67.8
Nitab4.5_0000481g0050 Nicotiana tabacum HOM05D005662 ORTHO05D007004 6.2e-89 331.3 222 71.2
Dinv22971 Davidia involucrata HOM05D005662 ORTHO05D007004 1.4e-88 330.1 229 69.4
Gohir.D07G210500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 1.4e-88 330.1 233 67.4
Thecc.03G160400 Theobroma cacao HOM05D005662 ORTHO05D007004 1.4e-88 330.1 231 70.6
QL09p018886 Quercus lobata HOM05D005662 ORTHO05D007004 4.0e-88 328.6 231 73.6
Gohir.A07G204500 Gossypium hirsutum HOM05D005662 ORTHO05D007004 5.2e-88 328.2 233 68.7
Manes.06G137000 Manihot esculenta HOM05D005662 ORTHO05D007004 8.9e-88 327.4 233 67.4
CiPaw.03G096300 Carya illinoinensis HOM05D005662 ORTHO05D007004 1.2e-87 327.0 232 69.4
vmacro06774 Vaccinium macrocarpon HOM05D005662 ORTHO05D007004 1.5e-87 326.6 231 71.9
CSS0015308 Camellia sinensis var. sinensis HOM05D005662 ORTHO05D007004 3.4e-87 325.5 233 71.2
Lsat_1_v5_gn_8_9401 Lactuca sativa HOM05D005662 ORTHO05D007004 7.5e-87 324.3 236 67.8
Prupe.2G281200 Prunus persica HOM05D005662 ORTHO05D007004 1.7e-86 323.2 232 71.6
MSTRG.8809 Avicennia marina HOM05D005662 ORTHO05D007004 2.2e-86 322.8 231 67.5
Actinidia13561 Actinidia chinensis HOM05D005662 ORTHO05D007004 8.3e-86 320.9 224 72.3
Solyc03g083540.3 Solanum lycopersicum HOM05D005662 ORTHO05D007004 1.1e-85 320.5 228 67.5
Ciclev10005797m.g Citrus clementina HOM05D005662 ORTHO05D007004 1.4e-85 320.1 234 69.2
FvH4_7g28050 Fragaria vesca HOM05D005662 ORTHO05D007004 1.4e-85 320.1 232 70.3
THA.LOC104821401 Tarenaya hassleriana HOM05D005662 ORTHO05D007004 1.4e-85 320.1 226 68.1
Duzib205G1232 Durio zibethinus HOM05D005662 ORTHO05D007004 1.9e-85 319.7 241 67.2
MD01G1184800 Malus domestica HOM05D005662 ORTHO05D007004 1.9e-85 319.7 232 67.7
TAR374G0299 Trochodendron aralioides HOM05D005662 ORTHO05D007004 2.4e-85 319.3 234 68.4
Dinv28543 Davidia involucrata HOM05D005662 ORTHO05D007004 4.1e-85 318.5 235 67.7
RcHm_v2.0_Chr1g0374961 Rosa chinensis HOM05D005662 ORTHO05D007004 4.1e-85 318.5 230 70.9
Sopen03g023350 Solanum pennellii HOM05D005662 ORTHO05D007004 5.4e-85 318.2 228 67.1
Eucgr.K00149 Eucalyptus grandis HOM05D005662 ORTHO05D007004 1.2e-84 317.0 234 65.8
Atru.chr1.651 Acer truncatum HOM05D005662 ORTHO05D007004 2.1e-84 316.2 232 69.0
Nn4g26371 Nelumbo nucifera HOM05D005662 ORTHO05D007004 6.0e-84 314.7 230 67.8
PGSC0003DMG400023012 Solanum tuberosum HOM05D005662 ORTHO05D007004 1.3e-83 313.5 231 66.2
ECA232G3412 Erigeron canadensis HOM05D005662 ORTHO05D007004 2.3e-83 312.8 231 69.3
TAR375G0912 Trochodendron aralioides HOM05D005662 ORTHO05D007004 3.0e-83 312.4 223 70.0
PGR142G0586 Punica granatum HOM05D005662 ORTHO05D007004 3.9e-83 312.0 231 67.1
Hma1.2p1_0654F.1_g196460 Hydrangea macrophylla HOM05D005662 ORTHO05D007004 5.1e-83 311.6 233 67.4
MBI12_g31644_MAGBIO Magnolia biondii HOM05D005662 ORTHO05D007004 5.1e-83 311.6 232 66.4
Cc02_g04010 Coffea canephora HOM05D005662 ORTHO05D007004 1.1e-82 310.5 236 66.9
HanXRQChr08g0223561 Helianthus annuus HOM05D005662 ORTHO05D007004 1.1e-82 310.5 235 68.1
Peaxi162Scf01372g00048 Petunia axillaris HOM05D005662 ORTHO05D007004 1.5e-82 310.1 222 65.3
GSVIVG01018540001 Vitis vinifera HOM05D005662 ORTHO05D007004 1.5e-82 310.1 228 65.4
DCAR_015743 Daucus carota HOM05D005662 ORTHO05D007004 2.8e-81 305.8 230 63.9
SGA_v2.0_scaffold2G01165 Striga asiatica HOM05D005662 ORTHO05D007004 3.1e-80 302.4 237 65.4
Sabra12G0096500 Salix brachista HOM05D005662 ORTHO05D007004 8.9e-80 300.8 209 70.3
Oeu039209.1 Olea europaea HOM05D005662 ORTHO05D007004 3.4e-79 298.9 211 68.7
SalBow4G2223 Salvia bowleyana HOM05D005662 ORTHO05D007004 4.4e-79 298.5 227 64.8
SalBow4G3324 Salvia bowleyana HOM05D005662 ORTHO05D007004 4.4e-79 298.5 227 64.8
Carub.0008s2298 Capsella rubella HOM05D005662 ORTHO05D007004 6.4e-78 294.7 232 63.8
Thhalv10004861m.g Eutrema salsugineum HOM05D005662 ORTHO05D007004 2.4e-77 292.7 233 63.5
Ca_30761_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 4.1e-77 292.0 232 62.1
Migut.F00442 Erythranthe guttata HOM05D005662 ORTHO05D007004 7.1e-77 291.2 225 68.0
CDE02G0217 Ceratophyllum demersum HOM05D005662 ORTHO05D007004 1.6e-76 290.0 233 63.1
Medtr4g033850 Medicago truncatula HOM05D005662 ORTHO05D007004 1.7e-75 286.6 234 60.7
AL8G39110 Arabidopsis lyrata HOM05D005662 ORTHO05D007004 3.9e-75 285.4 232 61.2
Duzib084G0609 Durio zibethinus HOM05D005662 ORTHO05D007004 5.1e-75 285.0 231 61.9
Sp2g25490 Schrenkiella parvula HOM05D005662 ORTHO05D007004 6.6e-75 284.6 226 61.9
Aqoxy7G00656 Aquilegia oxysepala HOM05D005662 ORTHO05D007004 8.6e-75 284.3 247 59.1
SGA_v2.0_scaffold486G52387 Striga asiatica HOM05D005662 ORTHO05D007004 8.6e-75 284.3 233 62.2
HanXRQChr16g0512531 Helianthus annuus HOM05D005662 ORTHO05D007004 1.5e-74 283.5 234 65.4
CARHR276070 Cardamine hirsuta HOM05D005662 ORTHO05D007004 1.9e-74 283.1 234 62.0
Rhsim03G0170700 Rhododendron simsii HOM05D005662 ORTHO05D007004 3.6e-73 278.9 283 54.4
EL10Ac3g05805 Beta vulgaris HOM05D005662 ORTHO05D007004 8.1e-73 277.7 232 62.1
A02p42240 Brassica napus HOM05D005662 ORTHO05D007004 1.1e-72 277.3 232 59.9
PSO478G4436 Papaver somniferum HOM05D005662 ORTHO05D007004 1.4e-72 276.9 233 59.7
AT5G62290 Arabidopsis thaliana HOM05D005662 ORTHO05D007004 1.8e-72 276.6 235 60.9
C02p62090 Brassica napus HOM05D005662 ORTHO05D007004 3.1e-72 275.8 233 60.5
Aa31LG11G1300 Aethionema arabicum HOM05D005662 ORTHO05D007004 2.0e-71 273.1 232 62.1
arahy.Tifrunner.gnm1.ann1.TMT042 Arachis hypogaea HOM05D005662 ORTHO05D007004 2.6e-71 272.7 225 61.8
TPR.G15119 Trifolium pratense HOM05D005662 ORTHO05D007004 3.4e-71 272.3 234 58.1
MELO3C005412.2 Cucumis melo HOM05D005662 ORTHO05D007004 4.4e-71 271.9 242 59.5
PSO782G3258 Papaver somniferum HOM05D005662 ORTHO05D007004 4.4e-71 271.9 233 58.8
Psat7g191960 Pisum sativum HOM05D005662 ORTHO05D007004 4.4e-71 271.9 236 59.3
arahy.Tifrunner.gnm1.ann1.93Q1AU Arachis hypogaea HOM05D005662 ORTHO05D007004 7.6e-71 271.2 225 61.8
Lalb_Chr15g0077021 Lupinus albus HOM05D005662 ORTHO05D007004 7.6e-71 271.2 220 61.4
arahy.Tifrunner.gnm1.ann1.QSR7PX Arachis hypogaea HOM05D005662 ORTHO05D007004 1.3e-70 270.4 226 62.8
Hund04625 Selenicereus undatus HOM05D005662 ORTHO05D007004 1.3e-70 270.4 210 63.8
BcaB07g29785 Brassica carinata HOM05D005662 ORTHO05D007004 4.9e-70 268.5 235 57.4
Glyma.09G233200 Glycine max HOM05D005662 ORTHO05D007004 4.9e-70 268.5 209 64.6
Lalb_Chr04g0260971 Lupinus albus HOM05D005662 ORTHO05D007004 1.1e-69 267.3 231 57.6
arahy.Tifrunner.gnm1.ann1.LZP622 Arachis hypogaea HOM05D005662 ORTHO05D007004 1.4e-69 266.9 225 61.3
BolC3t18716H Brassica oleracea HOM05D005662 ORTHO05D007004 3.2e-69 265.8 235 59.6
Sed0027239 Sechium edule HOM05D005662 ORTHO05D007004 9.3e-69 264.2 239 57.7
Lj3g0023650 Lotus japonicus HOM05D005662 ORTHO05D007004 7.8e-68 261.2 245 54.7
unitig_37.g12504 Utricularia gibba HOM05D005662 ORTHO05D007004 7.8e-68 261.2 220 60.9
Glyma.14G044000 Glycine max HOM05D005662 ORTHO05D007004 1.3e-67 260.4 224 60.3
Phvul.011G004300 Phaseolus vulgaris HOM05D005662 ORTHO05D007004 6.6e-67 258.1 217 60.4
VMungo1127G2067 Vigna mungo HOM05D005662 ORTHO05D007004 5.6e-66 255.0 217 59.0
ATR0733G084 Amborella trichopoda HOM05D005662 ORTHO05D007004 7.3e-66 254.6 239 54.4
BraA06t25849Z Brassica rapa HOM05D005662 ORTHO05D007004 7.3e-66 254.6 234 58.5
HPP92_004603 Vanilla planifolia HOM05D005662 ORTHO05D007004 9.6e-66 254.2 224 58.0
BraA02t09152Z Brassica rapa HOM05D005662 ORTHO05D007004 3.6e-65 252.3 249 54.6
ClCG01G005160 Citrullus lanatus HOM05D005662 ORTHO05D007004 3.6e-65 252.3 276 52.2
C03p64570 Brassica napus HOM05D000207 ORTHO05D001482 2.1e-60 236.5 212 59.0
Haze_13835 Corylus avellana HOM05D005662 ORTHO05D007004 3.5e-60 235.7 231 55.0
Sed0014362 Sechium edule HOM05D005662 ORTHO05D007004 2.5e-58 229.6 239 53.6
A06p29040 Brassica napus HOM05D000207 ORTHO05D001482 4.8e-57 225.3 210 58.1
Ca_00244_v3 Cicer arietinum L. HOM05D005662 ORTHO05D007004 1.8e-56 223.4 181 59.7
Atru.chr1.654 Acer truncatum HOM05D005662 ORTHO05D007004 1.3e-54 217.2 169 68.6
Cfa008223 Carpinus fangiana HOM05D000922 ORTHO05D007004 2.1e-52 209.9 157 69.4
Os10g0170000 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 7.9e-52 208.0 236 47.9
SEGI_33447 Sequoiadendron giganteum HOM05D005662 ORTHO05D007004 3.0e-51 206.1 222 50.9
Os03g0249300 Oryza sativa ssp. japonica HOM05D005662 ORTHO05D007004 1.6e-49 200.3 238 46.6
AUR62016115 Chenopodium quinoa HOM05D005662 ORTHO05D007004 2.1e-49 199.9 225 45.8
Zm00001eb010690 Zea mays HOM05D005662 ORTHO05D007004 1.3e-46 190.7 269 41.3
Zm00001eb224250 Zea mays HOM05D005662 ORTHO05D007004 4.6e-44 182.2 237 44.3
PSO063G7367 Papaver somniferum HOM05D005662 ORTHO05D007004 7.9e-44 181.4 136 63.2
Sabra15G0143400 Salix brachista HOM05D005662 ORTHO05D007004 3.3e-42 176.0 176 51.1
SMO351G0592 Selaginella moellendorffii HOM05D005662 ORTHO05D007004 9.7e-42 174.5 226 43.8
Mapoly0005s0155 Marchantia polymorpha HOM05D005662 ORTHO05D007004 2.8e-41 172.9 235 41.7
Pp3c5_5760 Physcomitrium patens HOM05D005662 ORTHO05D007004 8.2e-41 171.4 238 42.4
Sc13g0007790 Simmondsia chinensis HOM05D005662 ORTHO05D007004 3.1e-40 169.5 135 62.2
Pp3c16_14910 Physcomitrium patens HOM05D005662 ORTHO05D007004 5.3e-40 168.7 236 40.7
CAN.G152.22 Capsicum annuum HOM05D005662 ORTHO05D007004 1.2e-39 167.5 135 61.5
Cpa.g.sc130.1 Carica papaya HOM05D005662 ORTHO05D007004 2.5e-37 159.8 93 79.6
Lsat_1_v5_gn_9_52481 Lactuca sativa HOM05D005662 ORTHO05D007004 6.1e-36 155.2 215 44.2
CBR_g40194 Chara braunii HOM05D005662 ORTHO05D007004 2.5e-34 149.8 247 38.1
BcaC03g18141 Brassica carinata HOM05D000207 ORTHO05D001482 4.5e-31 139.0 111 63.1
Ah.13g067320 Amaranthus hybridus HOM05D005662 ORTHO05D007004 2.9e-30 136.3 95 63.2
AUR62035061 Chenopodium quinoa HOM05D005662 ORTHO05D007004 1.4e-29 134.0 98 60.2
DCAR_018618 Daucus carota HOM05D005662 ORTHO05D007004 1.9e-29 133.7 136 50.7
Ah.13g067330 Amaranthus hybridus HOM05D005662 ORTHO05D007004 7.2e-29 131.7 103 64.1
AagrBONN_evm.TU.Sc2ySwM_368.1564 Anthoceros agrestis HOM05D005662 ORTHO05D007004 1.0e-27 127.9 142 49.3
DCAR_021652 Daucus carota HOM05D000949 ORTHO05D001276 4.2e-21 105.9 112 49.1
PRCOL_00002770 Prasinoderma coloniale HOM05D005662 ORTHO05D007004 2.1e-20 103.6 153 39.2
Cre12.g538150 Chlamydomonas reinhardtii HOM05D005662 ORTHO05D007004 5.7e-18 95.5 149 32.9
Thecc.03G160100 Theobroma cacao HOM05D005662 ORTHO05D007004 5.7e-18 95.5 132 43.2
arahy.Tifrunner.gnm1.ann1.6UH5I2 Arachis hypogaea HOM05D005662 ORTHO05D007004 2.2e-17 93.6 135 42.2
DCAR_023430 Daucus carota HOM05D005662 ORTHO05D004064 1.4e-16 90.9 73 54.8
Ciclev10006356m.g Citrus clementina HOM05D005662 ORTHO05D007004 5.3e-16 89.0 76 64.5
COL.COLO4_29300 Corchorus olitorius HOM05D005662 ORTHO05D007004 3.5e-15 86.3 109 43.1
Solyc06g011630.1 Solanum lycopersicum HOM05D005662 ORTHO05D007004 5.0e-14 82.4 53 66.0
MCO15G129 Micromonas commoda HOM05D005662 ORTHO05D007004 3.2e-13 79.7 184 31.5
FvH4_3g21360 Fragaria vesca HOM05D005731 ORTHO05D012104 7.2e-13 78.6 86 53.5
DCAR_026119 Daucus carota HOM05D000323 ORTHO05D000201 3.6e-12 76.3 101 42.6
arahy.Tifrunner.gnm1.ann1.8PDC51 Arachis hypogaea HOM05D005662 ORTHO05D007004 5.7e-10 68.9 96 41.7


User provided reference genes

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