Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 1.3e-79 299.7 156 100.0
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 1.8e-36 156.4 143 63.6
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 1.2e-35 153.7 136 62.5
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 2.0e-35 152.9 136 62.5
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 1.7e-34 149.8 140 59.3
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 4.2e-33 145.2 104 72.1
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 5.5e-33 144.8 105 69.5
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 2.7e-32 142.5 149 58.4
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 6.1e-32 141.4 138 56.5
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 7.9e-32 141.0 115 67.0
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 1.0e-31 140.6 136 58.8
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 1.8e-31 139.8 148 56.8
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 3.0e-31 139.0 119 63.0
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 5.1e-31 138.3 148 56.8
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 6.7e-31 137.9 131 60.3
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 6.7e-31 137.9 130 59.2
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 1.1e-30 137.1 104 68.3
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 2.0e-30 136.3 139 59.0
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 3.3e-30 135.6 102 72.5
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 5.7e-30 134.8 141 56.7
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 7.4e-30 134.4 97 71.1
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 9.7e-30 134.0 124 60.5
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 9.7e-30 134.0 110 65.5
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 1.3e-29 133.7 95 73.7
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 2.2e-29 132.9 142 52.1
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 2.2e-29 132.9 139 56.1
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 2.8e-29 132.5 134 59.0
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 3.7e-29 132.1 94 72.3
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.8e-29 131.7 151 53.0
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 6.3e-29 131.3 103 65.0
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 6.3e-29 131.3 124 59.7
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 1.1e-28 130.6 108 65.7
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 1.8e-28 129.8 102 63.7
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 2.4e-28 129.4 118 61.0
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 3.1e-28 129.0 102 63.7
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.1e-28 129.0 126 57.1
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.1e-28 129.0 126 57.1
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 3.1e-28 129.0 107 64.5
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 3.1e-28 129.0 105 66.7
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 3.1e-28 129.0 127 54.3
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 4.1e-28 128.6 123 56.1
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 4.1e-28 128.6 136 55.9
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 5.3e-28 128.3 102 64.7
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 5.3e-28 128.3 102 63.7
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 5.3e-28 128.3 91 74.7
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 5.3e-28 128.3 131 58.0
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 5.3e-28 128.3 133 54.1
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 6.9e-28 127.9 106 63.2
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 6.9e-28 127.9 121 62.0
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 9.1e-28 127.5 114 60.5
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.2e-27 127.1 126 56.3
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 1.5e-27 126.7 102 62.7
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 1.5e-27 126.7 102 62.7
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 4.5e-27 125.2 104 62.5
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 7.7e-27 124.4 102 65.7
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 7.7e-27 124.4 140 52.9
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 7.7e-27 124.4 98 65.3
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 1.3e-26 123.6 151 51.0
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 1.3e-26 123.6 104 61.5
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.3e-26 123.6 144 47.9
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 1.7e-26 123.2 106 66.0
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 2.2e-26 122.9 132 54.5
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 2.9e-26 122.5 95 65.3
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 2.9e-26 122.5 145 48.3
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 3.8e-26 122.1 113 60.2
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 3.8e-26 122.1 98 63.3
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 5.0e-26 121.7 114 57.0
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 5.0e-26 121.7 147 48.3
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 6.5e-26 121.3 111 57.7
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 6.5e-26 121.3 90 68.9
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 6.5e-26 121.3 122 54.1
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 8.5e-26 120.9 109 56.9
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 8.5e-26 120.9 95 64.2
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 1.1e-25 120.6 127 57.5
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 1.1e-25 120.6 119 51.3
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 1.9e-25 119.8 139 47.5
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.9e-25 119.8 123 54.5
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 2.5e-25 119.4 103 57.3
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 2.5e-25 119.4 113 60.2
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 3.2e-25 119.0 106 61.3
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 4.2e-25 118.6 83 77.1
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 4.2e-25 118.6 95 64.2
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 9.4e-25 117.5 89 70.8
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 1.2e-24 117.1 139 48.9
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 1.2e-24 117.1 103 61.2
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.6e-24 116.7 113 59.3
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 3.6e-24 115.5 100 59.0
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 3.6e-24 115.5 102 61.8
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 1.0e-23 114.0 143 47.6
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 1.4e-23 113.6 92 65.2
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 6.7e-23 111.3 95 61.1
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.5e-22 110.2 86 61.6
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 2.6e-22 109.4 104 55.8
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.8e-21 105.9 130 48.5
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 3.7e-21 105.5 88 63.6
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 5.3e-20 101.7 164 38.4
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 2.6e-19 99.4 144 45.1
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 3.5e-19 99.0 97 55.7
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 7.7e-19 97.8 89 60.7
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 3.8e-18 95.5 105 48.6
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 1.1e-17 94.0 119 45.4
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 1.4e-17 93.6 102 46.1
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 5.5e-17 91.7 103 44.7
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 7.2e-17 91.3 105 52.4
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 1.4e-15 87.0 140 43.6
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 3.9e-15 85.5 135 37.0
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 3.9e-15 85.5 54 79.6
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 5.2e-15 85.1 122 43.4
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 6.7e-15 84.7 68 64.7
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 6.7e-15 84.7 61 68.9
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 3.3e-14 82.4 91 46.2
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 1.7e-10 70.1 128 36.7
TPR.G3235 Trifolium pratense HOM05D007055 ORTHO05D008943 5.2e-07 58.5 75 48.0
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 5.7e-06 55.1 88 45.5


User provided reference genes

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