Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2616 Cannabis sativa HOM05D007663 ORTHO05D009455 1.4e-65 253.4 199 100.0
CANSAT35G1813 Cannabis sativa HOM05D007663 ORTHO05D009455 1.8e-20 103.6 119 72.3
CANSAT56G3657 Cannabis sativa HOM05D007663 ORTHO05D009455 5.2e-20 102.1 119 71.4
Lj8A63T91 Lonicera japonica HOM05D007663 ORTHO05D009455 1.7e-15 87.0 138 41.3
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 1.1e-14 84.3 149 46.3
Os01g0829100 Oryza sativa ssp. japonica HOM05D007663 ORTHO05D009455 2.8e-13 79.7 149 42.3
Manes.11G152127 Manihot esculenta HOM05D007663 ORTHO05D009455 4.7e-13 79.0 134 54.5
Zm00001eb368510 Zea mays HOM05D007663 ORTHO05D009455 1.4e-12 77.4 127 43.3
Manes.11G152042 Manihot esculenta HOM05D007663 ORTHO05D009455 1.8e-12 77.0 134 53.7
Rhsim03G0146000 Rhododendron simsii HOM05D007663 ORTHO05D009455 1.8e-12 77.0 137 46.0
CSS0001014 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 6.8e-12 75.1 81 51.9
CSS0017188 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 6.8e-12 75.1 81 51.9
HanXRQChr14g0459391 Helianthus annuus HOM05D007663 ORTHO05D009455 2.6e-11 73.2 141 40.4
ECA238G2021 Erigeron canadensis HOM05D007663 ORTHO05D009455 5.8e-11 72.0 75 53.3
Manes.11G152141 Manihot esculenta HOM05D007663 ORTHO05D009455 1.3e-10 70.9 138 50.7
Manes.07G064632 Manihot esculenta HOM05D007663 ORTHO05D009455 1.7e-10 70.5 142 50.7
GSVIVG01032765001 Vitis vinifera HOM05D007663 ORTHO05D009455 1.7e-10 70.5 113 41.6
Cpa.g.sc65.132 Carica papaya HOM05D007663 ORTHO05D009455 2.2e-10 70.1 147 46.3
QL08p063638 Quercus lobata HOM05D007663 ORTHO05D009455 2.2e-10 70.1 129 46.5
vmacro17693 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 3.7e-10 69.3 137 44.5
Dinv21764 Davidia involucrata HOM05D007663 ORTHO05D009455 1.1e-09 67.8 132 50.0
Cfa001285 Carpinus fangiana HOM05D000718 ORTHO05D006723 1.4e-09 67.4 120 55.8
Lsat_1_v5_gn_2_124440 Lactuca sativa HOM05D007663 ORTHO05D009455 4.1e-09 65.9 134 38.1
DCAR_010462 Daucus carota HOM05D007663 ORTHO05D009455 1.6e-08 63.9 83 47.0
Nn2g10961 Nelumbo nucifera HOM05D007663 ORTHO05D009455 2.7e-08 63.2 64 57.8
Haze_17265 Corylus avellana HOM05D007663 ORTHO05D009455 6.0e-08 62.0 131 50.4
LjContig00357g0015684 Lotus japonicus HOM05D007663 ORTHO05D009455 6.0e-08 62.0 58 56.9
Manes.07G133005 Manihot esculenta HOM05D007663 ORTHO05D009455 1.0e-07 61.2 137 46.0
TWI73G0671 Tripterygium wilfordii HOM05D007663 ORTHO05D009455 1.3e-07 60.8 133 47.4
Ciclev10031427m.g Citrus clementina HOM05D007663 ORTHO05D009455 1.7e-07 60.5 139 49.6
Manes.11G152170 Manihot esculenta HOM05D007663 ORTHO05D009455 2.3e-07 60.1 137 48.9
Manes.11G152176 Manihot esculenta HOM05D007663 ORTHO05D009455 2.3e-07 60.1 137 48.9
Lalb_Chr04g0250441 Lupinus albus HOM05D007663 ORTHO05D009455 6.6e-07 58.5 71 49.3
MBI15_g12399_MAGBIO Magnolia biondii HOM05D007663 ORTHO05D009455 3.3e-06 56.2 123 39.0
arahy.Tifrunner.gnm1.ann1.CJK2YY Arachis hypogaea HOM05D007663 ORTHO05D009455 5.6e-06 55.5 74 44.6
arahy.Tifrunner.gnm1.ann1.QDW8X7 Arachis hypogaea HOM05D007663 ORTHO05D009455 5.6e-06 55.5 74 44.6
Duzib128G1882 Durio zibethinus HOM05D007663 ORTHO05D009455 5.6e-06 55.5 133 47.4
SGA_v2.0_scaffold44G16663 Striga asiatica HOM05D007663 ORTHO05D009455 5.6e-06 55.5 109 40.4
Gohir.D04G070200 Gossypium hirsutum HOM05D007663 ORTHO05D009455 7.3e-06 55.1 138 44.9
Migut.F00643 Erythranthe guttata HOM05D007663 ORTHO05D009455 9.5e-06 54.7 61 54.1


User provided reference genes

Program Settings