Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 8.0e-180 633.6 320 100.0
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.4e-160 569.7 320 88.4
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 9.2e-160 567.0 320 88.4
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 1.6e-159 566.2 318 88.1
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.3e-158 563.1 320 86.9
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.1e-157 560.1 317 88.0
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 1.9e-157 559.3 318 87.1
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 3.6e-156 555.1 320 86.9
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 4.7e-156 554.7 320 86.2
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 8.0e-156 553.9 320 85.9
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 8.0e-156 553.9 320 85.6
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 4.0e-155 551.6 320 85.9
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 6.8e-155 550.8 320 85.3
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.9e-153 545.4 320 84.7
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.4e-152 543.1 320 84.1
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 2.4e-152 542.3 320 84.1
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 5.4e-152 541.2 320 84.4
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 6.6e-150 534.3 320 83.1
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 6.6e-150 534.3 328 82.3
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 9.5e-149 530.4 327 81.0
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.2e-148 530.0 322 82.6
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.6e-148 529.6 318 82.1
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 2.1e-148 529.3 320 81.9
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.1e-148 529.3 320 81.9
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 6.2e-148 527.7 318 81.8
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 6.2e-148 527.7 320 81.6
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 8.1e-148 527.3 320 81.2
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.3e-147 525.8 327 81.7
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.1e-147 525.4 319 83.1
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 8.9e-147 523.9 327 81.3
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 2.0e-146 522.7 322 80.4
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 2.2e-145 519.2 324 80.9
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.1e-144 516.9 320 80.6
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 1.9e-144 516.2 320 80.0
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.6e-143 513.1 323 81.4
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 3.5e-143 511.9 327 78.9
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 4.6e-143 511.5 321 78.8
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 1.7e-142 509.6 320 78.4
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 1.7e-142 509.6 321 80.7
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 3.9e-142 508.4 318 78.6
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 8.6e-142 507.3 325 80.0
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 1.1e-141 506.9 320 77.8
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 1.1e-141 506.9 322 80.4
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 1.1e-141 506.9 324 78.7
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.9e-141 506.1 320 79.1
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 3.3e-141 505.4 320 78.4
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 1.2e-140 503.4 320 78.8
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 1.2e-140 503.4 322 78.3
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 1.6e-140 503.1 320 78.4
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 2.1e-140 502.7 320 78.1
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 2.1e-140 502.7 320 77.8
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 2.8e-140 502.3 320 78.4
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 3.6e-140 501.9 320 77.8
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 6.2e-140 501.1 320 78.1
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 8.1e-140 500.7 328 77.1
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.1e-139 500.4 320 77.2
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.4e-139 500.0 318 77.7
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 6.8e-139 497.7 320 78.4
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 2.0e-138 496.1 320 78.1
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 2.0e-138 496.1 320 78.1
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 2.6e-138 495.7 323 78.0
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 4.4e-138 495.0 326 77.6
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 5.8e-138 494.6 328 74.7
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 1.7e-137 493.0 324 75.9
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 3.8e-137 491.9 328 75.9
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 8.4e-137 490.7 328 73.8
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.1e-136 490.3 317 77.3
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.4e-136 490.0 328 75.6
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 3.2e-136 488.8 318 76.4
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 1.2e-135 486.9 328 74.1
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 7.8e-135 484.2 318 76.1
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 2.3e-134 482.6 317 75.4
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 2.3e-134 482.6 318 74.8
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.0e-134 482.3 318 78.0
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 7.3e-133 477.6 318 73.9
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.6e-132 476.5 319 74.6
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.9e-131 471.1 318 76.4
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 6.9e-131 471.1 325 73.8
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.6e-130 469.2 300 80.3
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.0e-127 458.0 300 78.0
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 3.9e-126 455.3 320 70.6
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 4.3e-125 451.8 317 70.3
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 9.6e-125 450.7 320 70.6
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 6.2e-124 448.0 303 72.9
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 3.1e-123 445.7 295 73.6
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.0e-123 444.1 305 76.7
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 2.2e-121 439.5 320 68.1
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 9.3e-120 434.1 320 66.6
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 1.9e-117 426.4 258 83.3
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.9e-117 426.4 320 65.6
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 3.1e-115 419.1 319 63.6
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.2e-114 417.2 320 65.9
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 4.2e-112 408.7 258 80.2
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 3.5e-111 405.6 326 60.1
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.6e-108 396.7 320 65.0
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 5.3e-107 391.7 320 61.9
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 1.7e-105 386.7 318 61.9
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 8.4e-105 384.4 311 63.7
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.1e-104 381.3 257 78.2
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 9.3e-104 380.9 315 58.1
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 2.1e-100 369.8 320 56.2
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 2.4e-99 366.3 229 81.7
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 6.1e-95 351.7 293 61.4
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 3.0e-94 349.4 214 82.2
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 5.1e-94 348.6 327 54.1
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 6.7e-94 348.2 320 54.7
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 6.9e-91 338.2 316 52.2
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.4e-90 335.9 306 62.1
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 6.1e-87 325.1 287 60.3
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 5.3e-83 312.0 321 49.5
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 1.1e-80 304.3 285 56.5
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 6.1e-79 298.5 214 69.6
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 3.5e-66 256.1 295 51.5
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 2.0e-42 177.2 161 60.9
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.1e-35 154.8 121 62.8
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 1.0e-33 148.3 272 35.3
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.3e-33 147.9 108 68.5
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.9e-32 144.1 116 62.1
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 1.5e-29 134.4 112 57.1
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.2e-27 125.2 108 63.0
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 5.1e-25 119.4 354 28.8
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.5e-24 117.1 115 53.0
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 2.0e-21 107.5 62 80.6
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 4.4e-21 106.3 72 72.2
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 1.7e-20 104.4 310 27.4
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 3.8e-12 76.6 62 59.7


User provided reference genes

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