Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 4.1e-286 987.3 460 100.0
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 4.5e-277 957.2 460 97.8
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 6.2e-258 893.6 460 89.6
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.8e-257 892.1 460 89.8
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 3.1e-257 891.3 460 89.6
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.5e-256 889.0 460 89.8
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 2.6e-256 888.3 460 89.6
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 4.4e-256 887.5 460 89.8
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 4.4e-256 887.5 460 89.3
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 9.8e-256 886.3 460 89.8
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.9e-255 884.8 461 89.6
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.9e-255 884.0 461 89.2
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 8.3e-255 883.2 460 88.9
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.2e-254 881.3 460 89.1
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.0e-254 880.2 461 88.9
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.2e-253 879.4 460 88.0
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 1.2e-253 879.4 461 88.9
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 1.6e-253 879.0 461 87.9
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.0e-253 878.6 460 89.1
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.0e-253 878.6 460 88.7
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 4.6e-253 877.5 461 88.9
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 6.0e-253 877.1 460 87.6
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 2.3e-252 875.2 460 87.4
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.3e-252 875.2 460 88.3
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 3.0e-252 874.8 475 85.3
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 6.6e-252 873.6 460 87.8
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 1.1e-251 872.8 460 86.5
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 1.1e-251 872.8 460 88.5
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 4.3e-251 870.9 461 87.2
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 5.6e-251 870.5 460 86.5
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 1.2e-250 869.4 462 88.1
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 2.3e-249 865.1 460 85.9
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 8.9e-249 863.2 460 86.1
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.6e-248 861.7 460 86.3
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 3.4e-248 861.3 460 86.1
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 4.4e-248 860.9 460 86.1
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 5.8e-248 860.5 460 85.7
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 5.8e-248 860.5 481 83.8
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 9.8e-248 859.8 460 85.2
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.3e-247 859.4 460 85.9
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 1.3e-247 859.4 460 85.9
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 9.2e-246 853.2 460 86.7
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 4.6e-245 850.9 460 84.6
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 6.0e-245 850.5 460 84.6
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.9e-243 845.5 460 83.0
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 3.3e-243 844.7 460 83.0
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 7.3e-243 843.6 460 83.7
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 2.8e-242 841.6 460 85.7
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 1.3e-239 832.8 460 82.8
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 1.3e-239 832.8 463 83.4
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.9e-239 831.6 460 82.6
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.1e-238 829.7 460 81.3
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 2.4e-238 828.6 461 82.9
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.6e-237 825.9 460 82.2
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.6e-237 825.9 460 82.2
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.6e-237 825.9 460 84.1
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 4.6e-237 824.3 461 82.0
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 1.7e-236 822.4 458 81.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.5e-235 819.3 453 82.6
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 9.6e-235 816.6 462 79.9
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 2.8e-234 815.1 459 81.0
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 8.1e-234 813.5 460 81.1
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 80.7
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 6.8e-233 810.4 460 82.4
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.2e-232 809.7 443 82.8
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.0e-232 808.9 498 76.9
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 2.6e-232 808.5 460 83.3
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 3.4e-232 808.1 460 79.8
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 4.4e-232 807.7 460 80.7
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 9.9e-232 806.6 460 80.7
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 1.7e-231 805.8 460 80.4
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.7e-231 805.8 460 80.7
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 4.9e-231 804.3 460 80.7
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 5.4e-230 800.8 460 80.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 7.1e-230 800.4 460 80.0
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 6.6e-228 793.9 458 79.3
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 4.3e-227 791.2 460 79.3
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 2.1e-226 788.9 487 75.4
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 3.2e-222 775.0 460 79.1
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 2.4e-217 758.8 458 74.9
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 5.3e-217 757.7 460 76.5
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 7.6e-216 753.8 469 73.1
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 6.7e-204 714.1 499 68.5
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.5e-203 712.2 460 72.8
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 1.1e-198 696.8 458 73.4
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 6.1e-189 664.5 393 78.1
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.9e-189 664.1 455 65.7
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.5e-187 659.8 454 65.6
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.6e-187 659.1 455 65.7
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.7e-186 656.4 342 89.8
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.7e-186 656.4 342 89.8
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.1e-185 652.1 341 89.1
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.5e-184 649.8 338 89.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 7.2e-182 641.0 385 80.3
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.2e-182 641.0 339 88.2
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.7e-181 639.0 339 88.2
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.8e-180 636.3 456 63.8
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 3.5e-176 622.1 321 89.7
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.0e-175 620.5 462 61.3
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.8e-172 609.8 337 82.8
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 8.2e-170 600.9 338 83.1
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 9.1e-169 597.4 299 92.0
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.3e-167 593.6 337 81.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 3.4e-163 578.9 461 57.0
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.7e-151 540.0 300 83.7
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.6e-151 537.7 291 87.3
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 6.1e-149 531.6 291 83.2
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.8e-148 530.0 337 74.2
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.1e-145 520.8 309 79.3
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.3e-138 497.3 277 80.5
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.3e-135 487.3 375 59.5
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 2.6e-131 473.0 280 78.9
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 1.2e-107 394.4 450 41.8
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 7.9e-96 355.1 484 37.6
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.2e-75 288.1 160 80.0
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-58 230.3 110 95.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.9e-58 230.3 110 95.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.5e-58 229.2 110 94.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 6.3e-53 212.6 195 55.9
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 4.5e-43 179.9 99 85.9
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-12 79.0 40 85.0


User provided reference genes

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