Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 4.8e-123 444.5 224 100.0
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 2.3e-101 372.5 224 82.6
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 4.1e-98 361.7 224 80.8
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 7.0e-98 360.9 218 83.0
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 2.2e-96 355.9 226 80.5
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 2.9e-96 355.5 223 80.7
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 3.8e-96 355.1 224 79.0
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 6.5e-96 354.4 220 81.4
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 1.1e-95 353.6 224 78.6
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 1.9e-95 352.8 224 78.1
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 3.2e-95 352.1 225 79.1
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 5.5e-95 351.3 224 79.0
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 1.2e-94 350.1 224 79.0
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 1.2e-94 350.1 220 80.0
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 1.2e-94 350.1 214 81.8
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.6e-94 349.7 224 78.6
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.6e-94 349.7 225 78.2
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.1e-94 349.4 224 78.6
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.1e-94 349.4 224 78.6
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 2.1e-94 349.4 224 78.6
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 2.7e-94 349.0 214 81.3
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 8.0e-94 347.4 219 81.7
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 8.0e-94 347.4 214 80.8
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 1.4e-93 346.7 221 78.3
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 1.8e-93 346.3 243 74.1
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 1.8e-93 346.3 226 78.3
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 2.3e-93 345.9 220 78.2
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.3e-93 345.9 217 81.1
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 3.0e-93 345.5 224 78.6
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 3.0e-93 345.5 230 76.5
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 4.0e-93 345.1 224 78.1
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 8.8e-93 344.0 218 79.8
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.5e-92 343.2 221 77.8
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.0e-92 342.8 217 78.8
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 5.7e-92 341.3 221 77.8
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 7.5e-92 340.9 219 77.2
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 9.8e-92 340.5 220 77.3
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 9.8e-92 340.5 215 79.5
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 1.7e-91 339.7 221 77.4
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 1.7e-91 339.7 219 78.1
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 2.2e-91 339.3 218 79.4
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 2.2e-91 339.3 221 76.0
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 2.2e-91 339.3 224 77.2
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 6.3e-91 337.8 224 78.1
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 1.8e-90 336.3 220 75.0
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.4e-90 335.9 224 77.7
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.4e-90 335.9 249 70.7
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.4e-90 335.9 212 79.7
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 2.4e-90 335.9 207 82.1
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 3.1e-90 335.5 228 77.2
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 3.1e-90 335.5 218 77.1
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 9.2e-90 334.0 224 75.4
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 9.2e-90 334.0 220 76.4
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.2e-89 333.6 223 76.2
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 1.2e-89 333.6 220 76.4
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 2.0e-89 332.8 222 76.1
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 1.3e-88 330.1 218 76.6
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 1.7e-88 329.7 226 76.1
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 2.3e-88 329.3 224 74.1
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 5.6e-87 324.7 217 75.1
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 5.6e-87 324.7 217 75.1
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 5.6e-87 324.7 217 75.6
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 1.2e-86 323.6 216 75.0
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.6e-86 323.2 217 74.7
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 2.8e-86 322.4 218 75.2
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 6.1e-86 321.2 224 71.9
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.4e-85 320.1 224 72.8
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 5.2e-85 318.2 224 72.3
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 6.8e-85 317.8 226 73.0
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 3.4e-84 315.5 217 73.3
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.8e-82 309.7 224 71.4
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 2.4e-82 309.3 215 72.1
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 3.2e-82 308.9 224 71.9
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 9.2e-82 307.4 215 72.1
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.6e-81 306.6 256 66.4
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 2.0e-81 306.2 221 70.6
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 2.7e-81 305.8 221 71.9
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.3e-80 303.5 200 78.0
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 2.3e-80 302.8 221 71.0
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 9.5e-79 297.4 193 77.7
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.4e-77 293.5 233 68.7
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 1.8e-77 293.1 246 65.9
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 2.3e-77 292.7 246 63.8
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 8.9e-77 290.8 207 73.4
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 1.2e-76 290.4 189 77.8
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 2.0e-76 289.7 217 70.0
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 7.5e-76 287.7 260 61.9
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.9e-75 285.8 211 71.1
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.7e-75 285.4 224 67.9
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 4.9e-75 285.0 220 66.8
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 1.4e-74 283.5 217 68.7
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.6e-70 270.0 178 76.4
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.6e-70 270.0 207 68.6
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 2.1e-70 269.6 221 66.1
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 5.1e-64 248.4 218 60.6
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 7.6e-60 234.6 195 66.7
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.9e-58 229.9 264 53.0
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 5.4e-58 228.4 153 76.5
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 9.2e-58 227.6 154 75.3
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 1.2e-57 227.3 208 59.6
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 3.5e-57 225.7 160 72.5
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 4.7e-54 215.3 227 54.6
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 6.2e-54 214.9 214 54.2
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 7.8e-49 198.0 143 67.8
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 6.6e-48 194.9 201 56.7
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 2.5e-47 193.0 162 65.4
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.6e-46 190.3 221 49.3
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 2.3e-40 169.9 223 46.2
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 2.6e-36 156.4 151 54.3
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 8.4e-35 151.4 384 32.6
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 1.4e-34 150.6 85 83.5
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 4.2e-34 149.1 104 73.1
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 6.5e-27 125.2 84 72.6
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 1.2e-20 104.4 70 72.9
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 2.9e-19 99.8 62 77.4
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 5.0e-19 99.0 51 92.2
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.1e-18 97.8 141 42.6
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 9.3e-18 94.7 67 74.6
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 1.0e-16 91.3 71 66.2
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 2.3e-16 90.1 66 72.7
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 3.9e-16 89.4 67 64.2
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 7.4e-15 85.1 193 32.6
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 1.4e-13 80.9 53 71.7
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.4e-13 80.9 56 71.4
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 7.9e-09 65.1 98 38.8
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.4e-08 64.3 57 54.4
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 8.8e-08 61.6 45 64.4


User provided reference genes

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