Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 1.4e-61 239.6 131 100.0
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 6.0e-17 91.3 88 55.7
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 2.3e-16 89.4 69 65.2
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 5.1e-16 88.2 72 63.9
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 6.7e-16 87.8 134 43.3
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 6.7e-16 87.8 107 49.5
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 8.7e-16 87.4 156 41.7
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 1.1e-15 87.0 132 43.9
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 1.9e-15 86.3 139 42.4
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 1.9e-15 86.3 149 41.6
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 2.5e-15 85.9 81 56.8
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 4.3e-15 85.1 66 69.7
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 4.3e-15 85.1 127 42.5
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 7.4e-15 84.3 101 48.5
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 7.4e-15 84.3 100 51.0
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 9.6e-15 84.0 82 56.1
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 1.3e-14 83.6 69 60.9
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 1.3e-14 83.6 64 64.1
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.6e-14 83.2 139 42.4
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.6e-14 83.2 65 69.2
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 1.6e-14 83.2 75 58.7
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 2.1e-14 82.8 138 43.5
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 2.1e-14 82.8 139 42.4
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 2.1e-14 82.8 113 43.4
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 2.8e-14 82.4 131 42.0
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 2.8e-14 82.4 128 44.5
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 3.7e-14 82.0 149 43.0
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 3.7e-14 82.0 82 57.3
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 3.7e-14 82.0 100 46.0
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 3.7e-14 82.0 69 62.3
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 4.8e-14 81.6 119 47.9
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 4.8e-14 81.6 126 42.1
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 4.8e-14 81.6 57 68.4
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 6.3e-14 81.3 91 49.5
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 6.3e-14 81.3 91 50.5
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 6.3e-14 81.3 116 45.7
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 6.3e-14 81.3 116 45.7
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 8.2e-14 80.9 143 44.1
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 8.2e-14 80.9 132 40.2
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 8.2e-14 80.9 94 50.0
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 8.2e-14 80.9 67 64.2
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 1.1e-13 80.5 100 46.0
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.1e-13 80.5 138 42.0
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 1.4e-13 80.1 81 51.9
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 1.8e-13 79.7 75 56.0
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 1.8e-13 79.7 141 41.1
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 3.1e-13 79.0 75 54.7
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 3.1e-13 79.0 58 62.1
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 4.1e-13 78.6 73 54.8
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 4.1e-13 78.6 153 38.6
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 6.9e-13 77.8 116 43.1
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 6.9e-13 77.8 116 43.1
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 6.9e-13 77.8 116 43.1
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 6.9e-13 77.8 59 61.0
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 9.0e-13 77.4 144 38.9
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 9.0e-13 77.4 75 53.3
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 1.2e-12 77.0 111 42.3
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 2.0e-12 76.3 61 62.3
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 2.0e-12 76.3 61 62.3
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 2.0e-12 76.3 71 59.2
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 2.6e-12 75.9 60 58.3
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 2.6e-12 75.9 147 42.2
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 3.4e-12 75.5 141 41.8
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 4.5e-12 75.1 105 45.7
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 4.5e-12 75.1 76 53.9
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 4.5e-12 75.1 74 48.6
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 5.9e-12 74.7 60 58.3
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 5.9e-12 74.7 72 54.2
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 7.6e-12 74.3 74 48.6
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 7.6e-12 74.3 104 41.3
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 7.6e-12 74.3 87 48.3
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 1.0e-11 73.9 133 38.3
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 1.3e-11 73.6 60 56.7
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 1.3e-11 73.6 60 60.0
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 1.3e-11 73.6 63 55.6
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 2.9e-11 72.4 61 55.7
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 3.8e-11 72.0 75 52.0
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 3.8e-11 72.0 63 54.0
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 5.0e-11 71.6 139 40.3
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 6.5e-11 71.2 113 37.2
CARHR091010 Cardamine hirsuta HOM05D007527 ORTHO05D009523 8.4e-11 70.9 65 49.2
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 8.4e-11 70.9 63 54.0
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 1.1e-10 70.5 69 50.7
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 1.9e-10 69.7 143 36.4
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 5.5e-10 68.2 63 58.7
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 5.5e-10 68.2 108 39.8
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 1.2e-09 67.0 124 40.3
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 2.1e-09 66.2 98 40.8
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 2.1e-09 66.2 125 37.6
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 2.7e-09 65.9 55 58.2
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 2.7e-09 65.9 46 71.7
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 7.9e-09 64.3 57 52.6
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 1.0e-08 63.9 141 32.6
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 5.1e-08 61.6 62 50.0
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 6.7e-08 61.2 126 36.5
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.5e-07 60.1 127 34.6
Mapoly0006s0085 Marchantia polymorpha HOM05D007527 ORTHO05D009523 7.4e-07 57.8 61 47.5


User provided reference genes

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