Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2487 Cannabis sativa HOM05D006343 ORTHO05D005694 2.9e-134 482.3 316 100.0
Manes.01G254700 Manihot esculenta HOM05D006343 ORTHO05D005694 3.9e-54 216.1 325 47.7
Ciclev10021525m.g Citrus clementina HOM05D006343 ORTHO05D005694 4.8e-52 209.1 330 44.2
Manes.05G031900 Manihot esculenta HOM05D006343 ORTHO05D005694 1.1e-51 208.0 329 45.3
Prupe.2G173800 Prunus persica HOM05D006343 ORTHO05D005694 9.0e-51 204.9 318 51.9
CiPaw.02G033200 Carya illinoinensis HOM05D006343 ORTHO05D005694 5.9e-50 202.2 330 47.3
CiPaw.01G064000 Carya illinoinensis HOM05D006343 ORTHO05D005694 1.1e-48 198.0 334 56.6
Sabra14G0063500 Salix brachista HOM05D006343 ORTHO05D005694 7.2e-48 195.3 333 42.3
Potri.002G161700 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.7e-44 184.1 326 43.3
Potri.014G087500 Populus trichocarpa HOM05D006343 ORTHO05D005694 6.9e-43 178.7 331 40.5
QL04p054168 Quercus lobata HOM05D006343 ORTHO05D005694 2.9e-41 173.3 335 52.2
MD01G1067400 Malus domestica HOM05D006343 ORTHO05D005694 3.8e-41 172.9 325 44.9
Sabra02G0128600 Salix brachista HOM05D006343 ORTHO05D005694 5.0e-41 172.6 333 39.3
Dinv43841 Davidia involucrata HOM05D006343 ORTHO05D005694 3.6e-39 166.4 321 41.7
Atru.chr5.528 Acer truncatum HOM05D006343 ORTHO05D005694 2.3e-38 163.7 332 41.9
FAN10G0914 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.0e-37 160.6 334 38.3
RcHm_v2.0_Chr1g0357021 Rosa chinensis HOM05D006343 ORTHO05D005694 3.3e-37 159.8 330 37.0
FAN01G0301 Fragaria x ananassa HOM05D006343 ORTHO05D005694 7.4e-37 158.7 338 38.8
TAR629G3314 Trochodendron aralioides HOM05D006343 ORTHO05D005694 1.3e-36 157.9 329 41.0
FAN10G3829 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.8e-36 156.8 334 37.7
FAN06G0921 Fragaria x ananassa HOM05D006343 ORTHO05D005694 4.8e-36 156.0 244 44.7
FvH4_7g14980 Fragaria vesca HOM05D006343 ORTHO05D005694 6.3e-36 155.6 244 44.7
MD07G1133500 Malus domestica HOM05D006343 ORTHO05D005694 9.1e-35 151.8 331 42.9
GSVIVG01026998001 Vitis vinifera HOM05D006343 ORTHO05D005694 1.2e-34 151.4 331 39.3
Glyma.07G068200 Glycine max HOM05D006343 ORTHO05D005694 4.5e-34 149.4 349 37.8
FAN03G1311 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.0e-33 148.3 324 34.6
Oeu055797.1 Olea europaea HOM05D006343 ORTHO05D005694 1.0e-33 148.3 323 36.8
CsaV3_6G000720 Cucumis sativus L. HOM05D006343 ORTHO05D005694 1.7e-33 147.5 325 41.2
FAN03G1905 Fragaria x ananassa HOM05D006343 ORTHO05D005694 8.5e-33 145.2 336 36.6
Nn1g01591 Nelumbo nucifera HOM05D006343 ORTHO05D005694 8.0e-31 138.7 334 45.8
FAN10G3557 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.0e-30 138.3 325 36.6
MSTRG.18339 Avicennia marina HOM05D006343 ORTHO05D005694 1.8e-30 137.5 323 33.7
Lalb_Chr17g0339411 Lupinus albus HOM05D006343 ORTHO05D005694 2.3e-30 137.1 333 45.3
SalBow6G3791 Salvia bowleyana HOM05D006343 ORTHO05D005694 2.3e-30 137.1 323 38.1
Hma1.2p1_0702F.1_g206150 Hydrangea macrophylla HOM05D006343 ORTHO05D005694 3.0e-30 136.7 322 40.4
Duzib138G0695 Durio zibethinus HOM05D006343 ORTHO05D005694 8.8e-30 135.2 325 44.9
FvH4_7g14870 Fragaria vesca HOM05D006343 ORTHO05D005694 8.8e-30 135.2 324 34.6
Cfa003895 Carpinus fangiana HOM05D006343 ORTHO05D005694 1.5e-29 134.4 320 42.8
Glyma.16G034200 Glycine max HOM05D006343 ORTHO05D005694 3.3e-29 133.3 350 36.0
Actinidia20887 Actinidia chinensis HOM05D006343 ORTHO05D005694 7.4e-29 132.1 323 34.4
Gorai.007G101600 Gossypium raimondii HOM05D006343 ORTHO05D005694 1.3e-28 131.3 319 45.1
FAN06G4353 Fragaria x ananassa HOM05D006343 ORTHO05D005694 2.8e-28 130.2 325 34.2
VMungo0331G0061 Vigna mungo HOM05D006343 ORTHO05D005694 3.7e-28 129.8 325 40.3
Oeu035725.1 Olea europaea HOM05D003054 ORTHO05D003376 4.8e-28 129.4 247 34.8
FAN06G0140 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.1e-27 128.3 322 33.9
FAN10G3545 Fragaria x ananassa HOM05D006343 ORTHO05D005694 3.1e-27 126.7 362 33.4
Phvul.010G101000 Phaseolus vulgaris HOM05D006343 ORTHO05D005694 4.1e-27 126.3 326 39.6
Sed0018743 Sechium edule HOM05D006343 ORTHO05D005694 4.1e-27 126.3 326 39.6
Eucgr.I00992 Eucalyptus grandis HOM05D006343 ORTHO05D005694 7.0e-27 125.6 248 35.5
COL.COLO4_12739 Corchorus olitorius HOM05D006343 ORTHO05D005694 9.1e-27 125.2 324 42.3
Oeu035719.1 Olea europaea HOM05D003054 ORTHO05D003376 2.0e-26 124.0 253 34.4
Dinv32502 Davidia involucrata HOM05D006343 ORTHO05D005694 1.3e-25 121.3 268 35.8
Oeu035722.1 Olea europaea HOM05D006343 ORTHO05D005694 1.3e-25 121.3 253 33.6
Haze_15537 Corylus avellana HOM05D006343 ORTHO05D005694 2.2e-25 120.6 321 44.5
MSTRG.12522 Avicennia marina HOM05D006343 ORTHO05D005694 2.9e-25 120.2 327 31.8
CSS0004449 Camellia sinensis var. sinensis HOM05D006343 ORTHO05D005694 5.0e-25 119.4 327 35.2
Lj3g0021957 Lotus japonicus HOM05D006343 ORTHO05D005694 1.1e-24 118.2 249 39.0
Rhsim01G0164400 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.9e-24 117.5 327 33.9
CAN.G650.25 Capsicum annuum HOM05D006343 ORTHO05D005694 2.5e-24 117.1 331 38.1
Lsat_1_v5_gn_7_4060 Lactuca sativa HOM05D006343 ORTHO05D005694 2.5e-24 117.1 337 32.9
Nitab4.5_0001655g0110 Nicotiana tabacum HOM05D006343 ORTHO05D005694 3.2e-24 116.7 352 31.2
Oeu035731.1 Olea europaea HOM05D006343 ORTHO05D005694 3.2e-24 116.7 319 30.7
Gohir.D11G095300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 5.5e-24 115.9 323 43.7
Nitab4.5_0001040g0020 Nicotiana tabacum HOM05D006343 ORTHO05D005694 5.5e-24 115.9 346 30.9
MELO3C021196.2 Cucumis melo HOM05D006343 ORTHO05D005694 8.0e-23 112.1 336 36.9
Rhsim01G0164000 Rhododendron simsii HOM05D006343 ORTHO05D005694 1.8e-22 110.9 340 35.9
vmacro20913 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 1.8e-22 110.9 340 32.9
Lsat_1_v5_gn_7_4100 Lactuca sativa HOM05D006343 ORTHO05D005694 3.0e-22 110.2 338 31.7
Cpa.g.sc11.35 Carica papaya HOM05D006343 ORTHO05D005694 8.8e-22 108.6 333 41.1
Cc02_g38320 Coffea canephora HOM05D006343 ORTHO05D005694 2.6e-21 107.1 323 35.9
FvH4_7g14880 Fragaria vesca HOM05D006343 ORTHO05D005694 3.7e-20 103.2 224 33.9
FAN06G3127 Fragaria x ananassa HOM05D006343 ORTHO05D005694 6.3e-20 102.4 224 33.5
CAN.G2424.1 Capsicum annuum HOM05D006343 ORTHO05D005694 8.3e-20 102.1 355 33.8
CAN.G650.35 Capsicum annuum HOM05D006343 ORTHO05D005694 8.3e-20 102.1 259 33.6
DCAR_015701 Daucus carota HOM05D006343 ORTHO05D005694 1.1e-19 101.7 326 31.9
FAN10G3360 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.1e-19 101.7 224 33.5
ClCG06G003540 Citrullus lanatus HOM05D006343 ORTHO05D005694 1.4e-19 101.3 79 69.6
Potri.014G099800 Populus trichocarpa HOM05D006343 ORTHO05D005694 1.8e-19 100.9 251 30.7
SGA_v2.0_scaffold1G00635 Striga asiatica HOM05D006343 ORTHO05D005694 2.4e-19 100.5 364 29.1
CAN.G650.28 Capsicum annuum HOM05D006343 ORTHO05D005694 5.4e-19 99.4 254 33.5
FAN10G1634 Fragaria x ananassa HOM05D006343 ORTHO05D005694 9.1e-19 98.6 224 33.0
Nitab4.5_0003369g0030 Nicotiana tabacum HOM05D006343 ORTHO05D005694 9.1e-19 98.6 335 31.9
TWI23G0998 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 9.1e-19 98.6 327 38.2
unitig_22.g5289 Utricularia gibba HOM05D006343 ORTHO05D005694 1.6e-18 97.8 337 29.1
vmacro20912 Vaccinium macrocarpon HOM05D006343 ORTHO05D005694 1.6e-18 97.8 267 32.2
CAN.G650.32 Capsicum annuum HOM05D006343 ORTHO05D005694 5.9e-18 95.9 342 30.7
Solyc02g070700.3 Solanum lycopersicum HOM05D006343 ORTHO05D005694 1.5e-16 91.3 346 32.4
Nitab4.5_0002749g0010 Nicotiana tabacum HOM05D006343 ORTHO05D005694 1.9e-16 90.9 332 30.7
Thecc.01G356100 Theobroma cacao HOM05D006343 ORTHO05D005694 3.2e-16 90.1 320 42.2
Oeu035728.1 Olea europaea HOM05D006343 ORTHO05D005694 1.2e-15 88.2 315 28.9
Duzib133G0920 Durio zibethinus HOM05D006343 ORTHO05D005694 2.7e-15 87.0 330 39.1
CDE02G1832 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 3.6e-15 86.7 335 27.5
FAN01G2602 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.4e-14 84.7 189 35.4
PGR042G0313 Punica granatum HOM05D006343 ORTHO05D005694 1.8e-14 84.3 189 34.9
Sopen02g019780 Solanum pennellii HOM05D006343 ORTHO05D005694 1.8e-14 84.3 332 32.5
Rhsim06G0236200 Rhododendron simsii HOM05D006343 ORTHO05D005694 4.0e-14 83.2 174 39.1
Aqoxy7G00256 Aquilegia oxysepala HOM05D006343 ORTHO05D005694 1.5e-13 81.3 343 30.3
Migut.D00457 Erythranthe guttata HOM05D006343 ORTHO05D005694 1.5e-13 81.3 188 45.7
THA.LOC104825850 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 2.0e-13 80.9 268 31.0
DCAR_015699 Daucus carota HOM05D006343 ORTHO05D005694 2.6e-13 80.5 317 33.1
CDE06G1281 Ceratophyllum demersum HOM05D006343 ORTHO05D005694 4.4e-13 79.7 186 31.7
TWI14G1134 Tripterygium wilfordii HOM05D006343 ORTHO05D005694 4.4e-13 79.7 325 37.2
AL6G53170 Arabidopsis lyrata HOM05D012121 ORTHO05D005694 5.7e-13 79.3 355 33.8
AT4G00310 Arabidopsis thaliana HOM05D012121 ORTHO05D005694 5.7e-13 79.3 356 31.5
ECA233G1044 Erigeron canadensis HOM05D006343 ORTHO05D005694 2.8e-12 77.0 259 27.0
Gohir.A11G090700 Gossypium hirsutum HOM05D006343 ORTHO05D005694 6.3e-12 75.9 320 40.9
Medtr8g028845 Medicago truncatula HOM05D006343 ORTHO05D005694 8.3e-12 75.5 88 51.1
Thhalv10028840m.g Eutrema salsugineum HOM05D012121 ORTHO05D005694 1.4e-11 74.7 356 26.7
BcaB01g02239 Brassica carinata HOM05D012121 ORTHO05D005694 4.1e-11 73.2 339 26.5
CARHR248400 Cardamine hirsuta HOM05D012121 ORTHO05D005694 9.1e-11 72.0 363 26.4
Gohir.D08G153300 Gossypium hirsutum HOM05D006343 ORTHO05D005694 1.2e-10 71.6 324 34.6
Sp6g00380 Schrenkiella parvula HOM05D012121 ORTHO05D005694 2.0e-10 70.9 328 26.5
Gohir.A08G131933 Gossypium hirsutum HOM05D006343 ORTHO05D005694 4.5e-10 69.7 99 47.5
Medtr3g015950 Medicago truncatula HOM05D006343 ORTHO05D005694 7.7e-10 68.9 325 28.9
Gorai.004G159200 Gossypium raimondii HOM05D006343 ORTHO05D005694 1.0e-09 68.6 99 47.5
Medtr8g028835 Medicago truncatula HOM05D006343 ORTHO05D005694 1.0e-09 68.6 79 51.9
FAN03G0040 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.3e-09 68.2 91 37.4
PSO782G1147 Papaver somniferum HOM05D020029 ORTHO05D005694 3.8e-09 66.6 338 32.2
THA.LOC104801575 Tarenaya hassleriana HOM05D012121 ORTHO05D005694 6.6e-09 65.9 113 45.1
FAN03G2349 Fragaria x ananassa HOM05D006343 ORTHO05D005694 1.9e-08 64.3 76 59.2
PSO782G1271 Papaver somniferum HOM05D020029 ORTHO05D005694 1.9e-08 64.3 221 25.8
TPR.G17916 Trifolium pratense HOM05D006343 ORTHO05D005694 9.5e-08 62.0 73 47.9
Carub.0006s3693 Capsella rubella HOM05D012121 ORTHO05D005694 1.6e-07 61.2 361 31.9
PSO478G0137 Papaver somniferum HOM05D020029 ORTHO05D005694 3.6e-07 60.1 339 26.5
PSO478G4526 Papaver somniferum HOM05D020029 ORTHO05D005694 4.7e-07 59.7 213 24.9
HPP92_025480 Vanilla planifolia HOM05D049984 ORTHO05D020951 1.4e-06 58.2 146 25.3


User provided reference genes

Program Settings