Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 3.7e-171 604.7 298 100.0
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 6.8e-165 583.9 288 99.3
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 6.6e-112 407.9 285 68.1
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 4.0e-109 398.7 269 68.8
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 9.9e-108 394.0 270 66.7
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 1.4e-106 390.2 286 66.1
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 1.9e-106 389.8 295 64.7
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.9e-106 389.8 273 67.4
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 4.2e-106 388.7 298 64.1
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 7.1e-106 387.9 273 66.7
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 9.3e-106 387.5 267 68.9
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 4.6e-105 385.2 300 65.3
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 2.3e-104 382.9 272 65.8
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 1.5e-103 380.2 265 67.5
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 2.5e-103 379.4 271 66.4
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 9.6e-103 377.5 271 67.2
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 6.2e-102 374.8 264 66.3
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 8.1e-102 374.4 265 66.4
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 8.1e-102 374.4 282 62.8
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 1.8e-101 373.2 269 64.7
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 2.4e-101 372.9 264 65.9
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 3.1e-101 372.5 272 64.3
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 3.1e-101 372.5 264 67.0
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 4.0e-101 372.1 265 65.7
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 5.3e-101 371.7 266 66.2
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 1.5e-100 370.2 267 64.0
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 2.9e-99 365.9 295 61.7
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 6.4e-99 364.8 288 61.5
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 8.4e-99 364.4 290 62.8
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 1.9e-98 363.2 293 61.4
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 7.1e-98 361.3 284 62.3
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 2.7e-97 359.4 253 65.6
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 3.5e-97 359.0 243 67.5
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 6.0e-97 358.2 304 56.9
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 1.0e-96 357.5 267 64.0
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 1.8e-96 356.7 299 59.5
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 3.3e-95 352.4 301 60.5
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 4.3e-95 352.1 299 58.2
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 7.4e-95 351.3 304 58.6
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 1.3e-94 350.5 266 62.8
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 1.3e-94 350.5 266 62.8
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 1.6e-94 350.1 280 58.9
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 3.7e-94 349.0 265 63.0
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 4.8e-94 348.6 265 62.3
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 4.8e-94 348.6 290 59.3
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 6.2e-94 348.2 297 58.2
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.4e-93 347.1 265 62.6
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.4e-93 347.1 266 62.4
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.4e-93 347.1 266 62.4
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 5.3e-93 345.1 275 61.5
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 9.0e-93 344.4 277 59.9
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 1.5e-92 343.6 290 57.9
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 1.5e-92 343.6 268 60.1
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 2.6e-92 342.8 265 61.9
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 4.5e-92 342.0 266 62.4
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 5.8e-92 341.7 269 60.2
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 1.3e-91 340.5 300 58.7
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 6.5e-91 338.2 222 72.5
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 6.5e-91 338.2 276 59.4
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 6.5e-91 338.2 279 59.9
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 1.9e-90 336.7 268 59.3
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 1.9e-90 336.7 269 61.0
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 2.5e-90 336.3 266 60.2
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 2.5e-90 336.3 266 60.2
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 3.5e-89 332.4 308 55.8
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 1.0e-88 330.9 272 59.2
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 1.0e-88 330.9 297 57.2
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 1.3e-88 330.5 286 57.0
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 1.8e-88 330.1 312 55.8
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 5.1e-88 328.6 300 57.3
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 6.7e-88 328.2 285 56.8
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 6.7e-88 328.2 288 57.3
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.5e-87 327.0 293 54.3
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 5.7e-87 325.1 295 55.6
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 7.4e-87 324.7 293 57.0
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 6.3e-86 321.6 270 58.5
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 6.3e-86 321.6 276 56.5
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 1.1e-85 320.9 269 57.6
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 1.1e-85 320.9 291 54.3
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 1.2e-84 317.4 276 55.4
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 2.6e-84 316.2 253 60.9
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 2.9e-83 312.8 289 56.1
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 2.5e-82 309.7 284 54.2
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 3.2e-82 309.3 266 55.6
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 2.1e-81 306.6 271 55.7
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 2.3e-80 303.1 270 54.8
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 5.1e-80 302.0 285 55.4
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 6.7e-80 301.6 277 55.6
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 1.9e-79 300.1 285 53.0
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 1.9e-79 300.1 251 59.0
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 2.5e-79 299.7 241 62.2
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 9.7e-79 297.7 277 55.2
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 1.8e-77 293.5 260 56.9
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 2.4e-77 293.1 251 56.6
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 4.1e-77 292.4 212 65.6
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 1.5e-76 290.4 304 50.7
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.5e-76 290.4 290 51.7
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 1.7e-75 287.0 292 50.3
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 4.2e-74 282.3 290 50.3
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 5.5e-74 282.0 268 55.6
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 8.2e-70 268.1 263 49.8
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 1.4e-66 257.3 192 62.5
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 3.2e-66 256.1 279 50.5
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 3.6e-65 252.7 255 49.4
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 4.7e-65 252.3 272 47.1
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 3.0e-64 249.6 276 48.9
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 1.1e-63 247.7 357 38.1
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 1.5e-63 247.3 301 43.5
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 3.7e-62 242.7 282 44.3
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.4e-61 240.0 219 54.8
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.4e-61 240.0 219 54.8
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.9e-59 233.0 226 53.1
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 6.5e-59 231.9 219 53.9
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 6.5e-59 231.9 219 53.9
CSS0049746 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.2e-57 227.6 197 58.9
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.8e-56 223.8 281 44.5
Pp3c17_15270 Physcomitrium patens HOM05D004971 ORTHO05D006289 8.2e-54 214.9 305 37.7
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 1.7e-51 207.2 191 52.9
MD02G1058100 Malus domestica HOM05D004971 ORTHO05D006289 8.0e-49 198.4 249 42.6
ATR0315G075 Amborella trichopoda HOM05D004971 ORTHO05D006289 1.5e-47 194.1 209 48.8
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 8.3e-46 188.3 177 59.3
CDE05G3470 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 8.5e-43 178.3 123 67.5
MCO09G154 Micromonas commoda HOM05D004971 ORTHO05D006289 1.6e-41 174.1 292 34.6
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 4.4e-39 166.0 168 57.1
EL10Ac8g18422 Beta vulgaris HOM05D004971 ORTHO05D006289 1.7e-38 164.1 138 56.5
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 1.7e-38 164.1 186 46.2
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 1.2e-36 157.9 448 28.8
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 2.7e-36 156.8 161 50.9
MBI04_g02609_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D000022 4.3e-34 149.4 351 32.8
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 2.8e-33 146.7 383 27.9
PRCOL_00000240 Prasinoderma coloniale HOM05D004971 ORTHO05D006289 6.8e-32 142.1 310 31.9
Lj4g0009518 Lotus japonicus HOM05D004971 ORTHO05D006289 2.4e-29 133.7 76 78.9
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 1.5e-26 124.4 154 42.2
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.4e-24 117.9 154 39.0
Cpa.g.sc40.24 Carica papaya HOM05D004971 ORTHO05D006289 1.1e-21 108.2 53 79.2
CSS0032398 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.2e-20 104.8 88 61.4
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 3.0e-19 100.1 139 41.7
MBI19_g24589_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 5.6e-18 95.9 194 36.1
MBI19_g42779_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.6e-17 94.4 165 37.6
Nitab4.5_0002165g0090 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-17 94.4 51 74.5
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 3.1e-16 90.1 56 71.4
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.6e-12 77.8 103 40.8
FvH4_7g02480 Fragaria vesca HOM05D004971 ORTHO05D022553 3.6e-09 66.6 38 73.7
FvH4_7g02600 Fragaria vesca HOM05D004971 ORTHO05D022553 3.6e-09 66.6 38 73.7
Haze_02522 Corylus avellana HOM05D004971 ORTHO05D006289 5.2e-08 62.8 87 40.2
MBI19_g24592_MAGBIO Magnolia biondii HOM05D004971 ORTHO05D006289 1.5e-07 61.2 38 60.5
Nitab4.5_0001706g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 1.3e-06 58.2 29 75.9
CiPaw.05G218700 Carya illinoinensis HOM05D004971 ORTHO05D006289 3.8e-06 56.6 32 71.9


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