Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 3.2e-63 245.0 129 100.0
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 1.2e-22 110.2 132 54.5
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 2.6e-20 102.4 132 47.7
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 2.6e-20 102.4 131 49.6
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 4.4e-20 101.7 132 47.7
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 7.5e-20 100.9 130 50.8
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 1.3e-19 100.1 126 51.6
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.3e-19 100.1 134 48.5
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 1.7e-19 99.8 134 45.5
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 2.9e-19 99.0 133 47.4
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 4.9e-19 98.2 129 48.8
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 4.9e-19 98.2 135 46.7
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 1.4e-18 96.7 132 46.2
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 1.4e-18 96.7 134 47.8
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 1.8e-18 96.3 133 47.4
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.8e-18 96.3 131 48.9
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 3.2e-18 95.5 132 48.5
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 4.1e-18 95.1 134 43.3
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 5.4e-18 94.7 133 45.9
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 7.0e-18 94.4 136 44.9
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 9.2e-18 94.0 133 46.6
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 9.2e-18 94.0 133 46.6
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 9.2e-18 94.0 133 45.9
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 1.2e-17 93.6 134 42.5
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 2.7e-17 92.4 133 45.9
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 3.5e-17 92.0 134 46.3
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 3.5e-17 92.0 136 45.6
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.5e-17 92.0 133 45.1
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 5.9e-17 91.3 128 48.4
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 1.7e-16 89.7 114 50.0
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 1.7e-16 89.7 127 47.2
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 3.9e-16 88.6 110 49.1
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 3.9e-16 88.6 117 46.2
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 3.9e-16 88.6 132 43.2
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 6.6e-16 87.8 115 48.7
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 6.6e-16 87.8 130 45.4
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 8.6e-16 87.4 135 45.2
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 8.6e-16 87.4 134 45.5
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 1.9e-15 86.3 133 41.4
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 1.9e-15 86.3 132 46.2
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.9e-15 86.3 134 40.3
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 1.9e-15 86.3 132 42.4
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 2.5e-15 85.9 134 45.5
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 3.3e-15 85.5 131 44.3
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 3.3e-15 85.5 138 46.4
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 4.3e-15 85.1 127 48.0
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 7.3e-15 84.3 133 45.1
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 7.3e-15 84.3 128 41.4
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 2.8e-14 82.4 129 39.5
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 8.0e-14 80.9 131 38.9
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 8.0e-14 80.9 136 41.9
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 8.0e-14 80.9 125 44.0
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 1.4e-13 80.1 139 42.4
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 2.3e-13 79.3 126 46.0
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.1e-13 79.0 118 44.9
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 4.0e-13 78.6 125 42.4
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 5.2e-13 78.2 128 39.8
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 5.2e-13 78.2 128 39.8
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 5.2e-13 78.2 134 38.1
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 6.8e-13 77.8 137 42.3
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 6.8e-13 77.8 133 42.9
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 6.8e-13 77.8 130 42.3
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 8.9e-13 77.4 134 41.8
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.5e-12 76.6 135 44.4
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 1.5e-12 76.6 130 41.5
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.5e-12 76.6 128 39.1
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 1.5e-12 76.6 132 40.9
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.5e-12 76.6 135 40.0
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 1.5e-12 76.6 111 44.1
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 2.0e-12 76.3 133 42.9
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 2.0e-12 76.3 141 41.8
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 2.0e-12 76.3 134 45.5
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 2.6e-12 75.9 99 50.5
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 2.6e-12 75.9 130 46.2
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 3.4e-12 75.5 124 41.1
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 5.8e-12 74.7 153 38.6
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 9.8e-12 73.9 112 42.9
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 9.8e-12 73.9 108 49.1
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 1.3e-11 73.6 133 41.4
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 2.2e-11 72.8 119 42.9
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 2.2e-11 72.8 129 40.3
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 4.9e-11 71.6 138 40.6
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 4.9e-11 71.6 115 44.3
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 8.3e-11 70.9 110 42.7
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 1.1e-10 70.5 84 47.6
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.1e-10 70.5 127 37.0
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 1.9e-10 69.7 129 44.2
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 3.2e-10 68.9 133 39.1
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 3.2e-10 68.9 123 39.0
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 4.1e-10 68.6 112 40.2
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 5.4e-10 68.2 80 45.0
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 5.4e-10 68.2 80 45.0
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 9.2e-10 67.4 127 43.3
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 1.2e-09 67.0 61 57.4
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 1.2e-09 67.0 127 34.6
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 2.0e-09 66.2 89 48.3
ClCG06G003680 Citrullus lanatus HOM05D000509 ORTHO05D006393 2.7e-09 65.9 121 42.1
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 6.0e-09 64.7 149 37.6
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 7.8e-09 64.3 85 42.4
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 2.3e-08 62.8 121 38.8
BraA04t15830Z Brassica rapa HOM05D000509 ORTHO05D006393 2.3e-08 62.8 121 38.8
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.3e-08 62.8 132 35.6
Aqoxy7G00306 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 3.0e-08 62.4 87 49.4
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 3.9e-08 62.0 125 37.6
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 8.6e-08 60.8 69 47.8
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 8.6e-08 60.8 133 35.3
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 8.6e-08 60.8 133 36.8
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 1.1e-07 60.5 119 38.7
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 1.1e-07 60.5 119 38.7
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 1.9e-07 59.7 81 45.7
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 1.9e-07 59.7 81 45.7
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 3.3e-07 58.9 154 32.5
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 4.3e-07 58.5 108 41.7
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 7.3e-07 57.8 74 43.2
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 7.3e-07 57.8 121 36.4
BcaC07g40634 Brassica carinata HOM05D000509 ORTHO05D006393 1.2e-06 57.0 116 38.8
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 2.1e-06 56.2 119 34.5
QL11p053603 Quercus lobata HOM05D000509 ORTHO05D006393 3.6e-06 55.5 54 55.6
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 6.2e-06 54.7 110 35.5
Carub.0005s2804 Capsella rubella HOM05D000509 ORTHO05D006393 8.1e-06 54.3 64 46.9
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 8.1e-06 54.3 76 42.1


User provided reference genes

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