Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2228 Cannabis sativa HOM05D006588 ORTHO05D008272 2.7e-258 894.8 449 100.0
CANSAT56G3648 Cannabis sativa HOM05D006588 ORTHO05D008272 2.0e-253 878.6 449 98.4
CANSAT56G0790 Cannabis sativa HOM05D006588 ORTHO05D008272 7.2e-227 790.4 411 97.8
CANSAT56G3251 Cannabis sativa HOM05D006588 ORTHO05D008272 4.0e-153 545.4 276 98.2
Atru.chr7.1520 Acer truncatum HOM05D006588 ORTHO05D008272 1.7e-140 503.4 449 57.7
Thecc.09G094100 Theobroma cacao HOM05D006588 ORTHO05D008272 6.2e-138 495.0 445 56.9
TAR636G2459 Trochodendron aralioides HOM05D006588 ORTHO05D008272 6.9e-137 491.5 451 56.1
CSS0027625 Camellia sinensis var. sinensis HOM05D006588 ORTHO05D008272 2.2e-135 486.5 450 55.8
Dinv36733 Davidia involucrata HOM05D006588 ORTHO05D008272 1.2e-133 480.7 420 58.6
Duzib150G1363 Durio zibethinus HOM05D006588 ORTHO05D008272 7.9e-133 478.0 442 56.3
Ciclev10008264m.g Citrus clementina HOM05D006588 ORTHO05D008272 3.0e-132 476.1 451 55.0
Hma1.2p1_1074F.1_g254320 Hydrangea macrophylla HOM05D006588 ORTHO05D008272 8.7e-132 474.6 446 54.7
Gohir.D06G069300 Gossypium hirsutum HOM05D006588 ORTHO05D008272 1.5e-131 473.8 445 54.8
Gorai.010G080900 Gossypium raimondii HOM05D006588 ORTHO05D008272 1.5e-131 473.8 445 54.8
Manes.03G030400 Manihot esculenta HOM05D006588 ORTHO05D008272 2.5e-131 473.0 451 55.7
QL02p063459 Quercus lobata HOM05D006588 ORTHO05D008272 4.3e-131 472.2 446 56.3
Lj4C316T0 Lonicera japonica HOM05D006588 ORTHO05D008272 1.6e-130 470.3 453 53.0
Cfa003132 Carpinus fangiana HOM05D006588 ORTHO05D008272 2.8e-130 469.5 439 56.7
Rhsim05G0031800 Rhododendron simsii HOM05D006588 ORTHO05D008272 1.1e-129 467.6 453 54.3
Sc15g0003870 Simmondsia chinensis HOM05D006588 ORTHO05D008272 2.6e-128 463.0 451 51.9
MSTRG.10583 Avicennia marina HOM05D006588 ORTHO05D008272 5.8e-128 461.8 450 52.0
Cc06_g10980 Coffea canephora HOM05D006588 ORTHO05D008272 5.8e-128 461.8 447 53.0
Glyma.08G030700 Glycine max HOM05D006588 ORTHO05D008272 7.6e-128 461.5 454 53.1
TWI34G1517 Tripterygium wilfordii HOM05D006588 ORTHO05D008272 2.1e-125 453.4 446 54.9
Phvul.002G305400 Phaseolus vulgaris HOM05D006588 ORTHO05D008272 2.3e-124 449.9 452 52.2
Migut.K00574 Erythranthe guttata HOM05D006588 ORTHO05D008272 6.7e-124 448.4 453 51.4
VMungo0251G0425 Vigna mungo HOM05D006588 ORTHO05D008272 3.3e-123 446.0 452 52.0
TPR.G25442 Trifolium pratense HOM05D006588 ORTHO05D008272 2.8e-122 443.0 459 51.0
Oeu018228.1 Olea europaea HOM05D006588 ORTHO05D008272 8.2e-122 441.4 458 50.7
Nn6g35407 Nelumbo nucifera HOM05D006588 ORTHO05D008272 6.9e-121 438.3 433 52.4
Lj4g0006334 Lotus japonicus HOM05D006588 ORTHO05D008272 5.8e-120 435.3 452 51.3
Lalb_Chr09g0331761 Lupinus albus HOM05D006588 ORTHO05D008272 7.6e-120 434.9 454 50.2
vmacro10821 Vaccinium macrocarpon HOM05D006588 ORTHO05D008272 7.6e-120 434.9 489 49.5
ClCG11G012860 Citrullus lanatus HOM05D006588 ORTHO05D008272 2.9e-119 433.0 446 51.1
Psat7g018800 Pisum sativum HOM05D006588 ORTHO05D008272 4.2e-118 429.1 461 50.1
Lsat_1_v5_gn_7_39041 Lactuca sativa HOM05D006588 ORTHO05D008272 7.1e-118 428.3 453 47.2
Ca_17389_v3 Cicer arietinum L. HOM05D006588 ORTHO05D008272 7.9e-117 424.9 455 49.5
MBI04_g06220_MAGBIO Magnolia biondii HOM05D006588 ORTHO05D008272 7.9e-117 424.9 451 49.2
SalBow1G2363 Salvia bowleyana HOM05D006588 ORTHO05D008272 3.9e-116 422.5 450 49.8
SalBow1G2795 Salvia bowleyana HOM05D006588 ORTHO05D008272 3.9e-116 422.5 450 49.8
CsaV3_5G029260 Cucumis sativus L. HOM05D006588 ORTHO05D008272 4.3e-115 419.1 446 49.8
HanXRQChr09g0238251 Helianthus annuus HOM05D006588 ORTHO05D008272 1.3e-114 417.5 457 46.8
Carub.0007s1112 Capsella rubella HOM05D006588 ORTHO05D008272 3.7e-114 416.0 451 48.1
Sed0004057 Sechium edule HOM05D006588 ORTHO05D008272 1.1e-113 414.5 447 51.7
AL7G22970 Arabidopsis lyrata HOM05D006588 ORTHO05D008272 1.4e-113 414.1 449 48.1
AT4G29420 Arabidopsis thaliana HOM05D006588 ORTHO05D008272 1.8e-113 413.7 450 47.6
Thhalv10025196m.g Eutrema salsugineum HOM05D006588 ORTHO05D008272 3.1e-113 412.9 451 47.0
unitig_699.g19309 Utricularia gibba HOM05D006588 ORTHO05D008272 1.5e-112 410.6 448 48.7
Aa31LG2G21010 Aethionema arabicum HOM05D006588 ORTHO05D008272 5.9e-112 408.7 455 47.9
SGA_v2.0_scaffold28G11949 Striga asiatica HOM05D006588 ORTHO05D008272 5.9e-112 408.7 482 45.0
ECA240G3150 Erigeron canadensis HOM05D006588 ORTHO05D008272 7.7e-112 408.3 452 46.7
A01p08610 Brassica napus HOM05D006588 ORTHO05D008272 1.1e-110 404.4 452 48.0
Sp7g27300 Schrenkiella parvula HOM05D006588 ORTHO05D008272 9.4e-110 401.4 456 46.7
BolC1t00966H Brassica oleracea HOM05D006588 ORTHO05D008272 4.6e-109 399.1 451 47.5
BraA01t00812Z Brassica rapa HOM05D006588 ORTHO05D008272 6.1e-109 398.7 454 46.9
CARHR237240 Cardamine hirsuta HOM05D006588 ORTHO05D008272 3.3e-107 392.9 456 46.1
C01p10080 Brassica napus HOM05D006588 ORTHO05D008272 4.8e-106 389.0 451 46.6
CiPaw.03G219600 Carya illinoinensis HOM05D006588 ORTHO05D008272 8.2e-106 388.3 314 63.4
THA.LOC104814599 Tarenaya hassleriana HOM05D006588 ORTHO05D008272 1.1e-105 387.9 440 47.5
Eucgr.C00929 Eucalyptus grandis HOM05D006588 ORTHO05D008272 8.5e-103 378.3 440 47.7
Gohir.A06G070700 Gossypium hirsutum HOM05D006588 ORTHO05D008272 1.1e-102 377.9 314 60.8
CDE06G2665 Ceratophyllum demersum HOM05D006588 ORTHO05D008272 1.4e-94 350.9 438 43.8
Lsat_1_v5_gn_7_38040 Lactuca sativa HOM05D006588 ORTHO05D008272 2.5e-94 350.1 450 42.0
COL.COLO4_18239 Corchorus olitorius HOM05D006588 ORTHO05D008272 3.6e-93 346.3 446 44.6
Medtr8g101930 Medicago truncatula HOM05D006588 ORTHO05D008272 1.7e-90 337.4 406 45.1
ATR0789G046 Amborella trichopoda HOM05D006588 ORTHO05D008272 7.7e-88 328.6 448 40.8
Lsat_1_v5_gn_7_38780 Lactuca sativa HOM05D006588 ORTHO05D008272 1.0e-87 328.2 478 40.4
Lsat_1_v5_gn_7_38281 Lactuca sativa HOM05D006588 ORTHO05D008272 2.2e-87 327.0 459 40.7
Lsat_1_v5_gn_7_37981 Lactuca sativa HOM05D006588 ORTHO05D008272 6.5e-87 325.5 452 39.8
Lsat_1_v5_gn_7_38001 Lactuca sativa HOM05D006588 ORTHO05D008272 6.5e-87 325.5 452 39.8
Actinidia39746 Actinidia chinensis HOM05D006588 ORTHO05D008272 2.5e-86 323.6 454 44.9
HPP92_003983 Vanilla planifolia HOM05D006588 ORTHO05D008272 6.3e-82 308.9 459 40.1
Haze_25873 Corylus avellana HOM05D006588 ORTHO05D008272 5.3e-81 305.8 286 56.3
Lsat_1_v5_gn_7_38020 Lactuca sativa HOM05D006588 ORTHO05D008272 4.5e-80 302.8 503 36.4
SEGI_25649 Sequoiadendron giganteum HOM05D006588 ORTHO05D008272 1.7e-79 300.8 453 36.4
Rhsim05G0031600 Rhododendron simsii HOM05D006588 ORTHO05D008272 8.8e-76 288.5 296 52.7
HanXRQChr03g0060991 Helianthus annuus HOM05D006588 ORTHO05D008272 4.8e-74 282.7 454 38.3
Eucgr.L03123 Eucalyptus grandis HOM05D006588 ORTHO05D008272 5.5e-70 269.2 507 36.5
HanXRQChr03g0060961 Helianthus annuus HOM05D006588 ORTHO05D008272 2.8e-69 266.9 450 36.7
HanXRQChr03g0060631 Helianthus annuus HOM05D006588 ORTHO05D008272 3.6e-69 266.5 446 38.6
HanXRQChr03g0061101 Helianthus annuus HOM05D006588 ORTHO05D008272 3.0e-68 263.5 448 36.2
MELO3C011777.2 Cucumis melo HOM05D006588 ORTHO05D008272 1.2e-67 261.5 290 46.6
HanXRQChr03g0060681 Helianthus annuus HOM05D006588 ORTHO05D008272 2.0e-67 260.8 454 35.5
HanXRQChr03g0060671 Helianthus annuus HOM05D006588 ORTHO05D008272 5.7e-67 259.2 455 35.2
Zm00001eb121140 Zea mays HOM05D006588 ORTHO05D008272 3.2e-65 253.4 449 36.5
BcaC09g51727 Brassica carinata HOM05D006588 ORTHO05D008272 9.2e-65 251.9 296 45.9
Os01g0193500 Oryza sativa ssp. japonica HOM05D006588 ORTHO05D008272 8.0e-61 238.8 448 33.7
HanXRQChr05g0142321 Helianthus annuus HOM05D006588 ORTHO05D008272 3.7e-58 229.9 402 38.6
Actinidia25278 Actinidia chinensis HOM05D006588 ORTHO05D008272 1.4e-57 228.0 194 60.8
Nn7g36587 Nelumbo nucifera HOM05D006588 ORTHO05D008272 1.7e-50 204.5 224 50.9
Duzib168G2000 Durio zibethinus HOM05D006588 ORTHO05D002622 1.1e-49 201.8 199 53.8
HanXRQChr03g0060651 Helianthus annuus HOM05D006588 ORTHO05D008272 3.2e-41 173.7 323 34.7
Lsat_1_v5_gn_7_38181 Lactuca sativa HOM05D006588 ORTHO05D008272 4.6e-40 169.9 440 31.8
HanXRQChr03g0060621 Helianthus annuus HOM05D006588 ORTHO05D008272 3.0e-39 167.2 251 39.8
Rhsim05G0031700 Rhododendron simsii HOM05D006588 ORTHO05D008272 1.1e-36 158.7 266 36.8
AagrBONN_evm.TU.Sc2ySwM_228.3249 Anthoceros agrestis HOM05D006588 ORTHO05D008272 6.8e-36 156.0 286 33.6
Lsat_1_v5_gn_7_39080 Lactuca sativa HOM05D006588 ORTHO05D008272 1.1e-33 148.7 179 44.7
Pp3c2_16400 Physcomitrium patens HOM05D006588 ORTHO05D008272 4.2e-33 146.7 484 23.8
Mapoly0029s0113 Marchantia polymorpha HOM05D006588 ORTHO05D008272 2.7e-32 144.1 468 23.1
Mapoly0117s0028 Marchantia polymorpha HOM05D006588 ORTHO05D008272 1.0e-31 142.1 454 24.7
Pp3c1_20980 Physcomitrium patens HOM05D006588 ORTHO05D008272 3.0e-31 140.6 512 22.1
Mapoly0117s0029 Marchantia polymorpha HOM05D006588 ORTHO05D008272 8.1e-29 132.5 434 25.3
Pp3c10_4240 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.4e-25 120.9 363 24.0
Pp3c21_900 Physcomitrium patens HOM05D006588 ORTHO05D008272 3.2e-25 120.6 436 23.9
Pp3c4_15950 Physcomitrium patens HOM05D006588 ORTHO05D008272 3.0e-23 114.0 355 26.8
Pp3c19_6110 Physcomitrium patens HOM05D006588 ORTHO05D008272 6.6e-23 112.8 307 27.4
HanXRQChr03g0061001 Helianthus annuus HOM05D006588 ORTHO05D008272 8.7e-23 112.5 122 48.4
Pp3c13_20140 Physcomitrium patens HOM05D006588 ORTHO05D008272 3.3e-22 110.5 455 22.4
Pp3c18_21550 Physcomitrium patens HOM05D006588 ORTHO05D008272 1.3e-21 108.6 462 24.0
Pp3c21_980 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.1e-21 107.8 262 26.3
Pp3c22_1680 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.6e-19 100.9 304 24.0
Pp3c21_1000 Physcomitrium patens HOM05D006588 ORTHO05D008272 3.9e-15 87.0 321 23.4
unitig_699.g19308 Utricularia gibba HOM05D006588 ORTHO05D008272 2.8e-13 80.9 164 31.1
unitig_699.g19307 Utricularia gibba HOM05D006588 ORTHO05D008272 8.1e-13 79.3 124 42.7
Nn1g07420 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.5e-11 75.1 66 53.0
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.7e-10 71.6 66 53.0
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.7e-10 71.6 66 53.0
Nn1g09464 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.8e-10 70.5 65 50.8
SalBow8G2706 Salvia bowleyana HOM05D000076 ORTHO05D013329 6.5e-10 69.7 88 45.5
Pp3s358_10 Physcomitrium patens HOM05D006588 ORTHO05D008272 2.5e-09 67.8 184 26.6
Glyma.05G223602 Glycine max HOM05D006588 ORTHO05D008272 2.1e-08 64.7 98 40.8
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 3.5e-08 63.9 59 50.8
Haze_18080 Corylus avellana HOM05D006588 ORTHO05D008272 2.5e-06 57.8 103 35.0
Thhalv10007703m.g Eutrema salsugineum HOM05D005359 ORTHO05D006431 2.5e-06 57.8 358 24.0
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 4.3e-06 57.0 56 46.4
CBR_g26097 Chara braunii HOM05D019043 ORTHO05D020397 5.7e-06 56.6 304 23.0
HanXRQChr03g0060641 Helianthus annuus HOM05D006588 ORTHO05D008272 7.4e-06 56.2 63 36.5


User provided reference genes

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