Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 3.5e-222 774.6 389 100.0
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 2.1e-166 589.3 390 77.9
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 3.6e-166 588.6 390 77.9
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 2.6e-164 582.4 387 78.0
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 7.5e-164 580.9 389 77.6
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 7.5e-164 580.9 392 75.5
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 9.7e-164 580.5 398 76.1
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 1.1e-162 577.0 392 75.0
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 2.4e-162 575.9 388 76.8
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 2.4e-162 575.9 389 75.6
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 4.1e-162 575.1 392 75.3
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 4.1e-162 575.1 400 74.5
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 1.2e-161 573.5 386 75.9
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 2.7e-161 572.4 400 74.0
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 2.7e-161 572.4 396 74.2
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 1.0e-160 570.5 390 74.4
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 3.8e-160 568.5 390 75.4
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 1.5e-159 566.6 393 72.8
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 1.5e-159 566.6 394 75.6
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 3.2e-159 565.5 398 73.4
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 5.5e-159 564.7 391 73.9
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 2.1e-158 562.8 362 78.2
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 2.1e-158 562.8 377 76.1
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 2.7e-158 562.4 343 80.8
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 3.6e-158 562.0 338 81.4
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 6.1e-158 561.2 375 75.7
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 1.0e-157 560.5 389 73.8
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 1.0e-157 560.5 381 75.9
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 2.3e-157 559.3 329 82.4
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 2.3e-157 559.3 386 74.1
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 4.0e-157 558.5 393 73.3
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 4.0e-157 558.5 380 75.3
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 5.2e-157 558.1 389 74.8
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 5.2e-157 558.1 368 75.5
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 1.5e-156 556.6 325 83.1
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 2.6e-156 555.8 399 72.2
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 5.7e-156 554.7 361 76.5
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 9.8e-156 553.9 392 71.7
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 1.3e-155 553.5 387 73.6
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 1.3e-155 553.5 325 82.5
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 2.2e-155 552.7 391 73.1
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 3.7e-155 552.0 393 73.0
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 3.7e-155 552.0 391 73.4
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 4.8e-155 551.6 338 81.1
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 6.3e-155 551.2 335 79.7
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 1.4e-154 550.1 325 82.5
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 1.4e-154 550.1 383 73.4
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 1.4e-154 550.1 382 73.3
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 1.8e-154 549.7 339 78.5
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 2.4e-154 549.3 345 77.7
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 2.4e-154 549.3 389 73.8
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 2.4e-154 549.3 380 73.7
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 3.1e-154 548.9 325 81.5
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 3.1e-154 548.9 318 83.0
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 4.1e-154 548.5 395 72.9
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 1.2e-153 547.0 342 77.8
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 2.7e-153 545.8 322 81.7
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 2.7e-153 545.8 322 81.7
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 3.5e-153 545.4 379 73.9
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 7.7e-153 544.3 357 76.2
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 1.7e-152 543.1 318 81.8
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 2.9e-152 542.3 394 70.8
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 8.6e-152 540.8 325 81.2
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 1.1e-151 540.4 369 75.6
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 3.3e-151 538.9 390 69.0
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 7.2e-151 537.7 373 74.8
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 1.6e-150 536.6 396 70.2
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 1.4e-149 533.5 374 73.0
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 8.9e-149 530.8 389 70.2
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 1.5e-148 530.0 317 78.9
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 2.0e-148 529.6 374 71.4
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 2.6e-148 529.3 389 68.1
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 7.5e-148 527.7 380 71.6
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 1.7e-147 526.6 372 71.0
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 4.9e-147 525.0 381 70.1
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 8.3e-147 524.2 384 70.1
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 9.2e-146 520.8 378 68.0
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 4.3e-143 511.9 385 70.1
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 3.6e-142 508.8 399 65.2
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 4.0e-141 505.4 316 77.5
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 2.0e-140 503.1 344 76.5
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 4.4e-140 501.9 276 88.4
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 5.8e-140 501.5 318 76.1
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 8.3e-139 497.7 316 75.0
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 7.0e-138 494.6 390 67.2
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 4.6e-129 465.3 276 81.2
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 1.0e-128 464.2 268 83.6
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 5.6e-127 458.4 267 83.9
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 1.6e-126 456.8 369 66.7
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 1.0e-120 437.6 259 82.6
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 5.1e-120 435.3 319 65.8
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 8.6e-120 434.5 318 70.8
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 9.9e-116 421.0 300 73.3
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 1.7e-115 420.2 369 56.1
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 8.4e-115 417.9 268 73.1
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 4.2e-114 415.6 330 60.9
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 2.4e-109 399.8 320 59.1
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 9.0e-109 397.9 292 73.3
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 1.7e-107 393.7 272 72.4
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 4.9e-107 392.1 267 73.8
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 2.3e-104 383.3 290 70.0
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 1.1e-95 354.4 252 70.2
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 8.2e-86 321.6 269 67.3
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 1.2e-76 291.2 267 59.6
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 2.0e-76 290.4 242 64.9
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 5.7e-71 272.3 350 42.6
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 7.4e-71 271.9 311 46.6
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 4.8e-70 269.2 322 41.6
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 4.8e-70 269.2 322 41.6
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 8.2e-70 268.5 165 78.2
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 1.7e-67 260.8 154 81.8
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 3.9e-64 249.6 166 77.1
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 2.6e-60 236.9 130 87.7
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 2.4e-37 160.6 407 31.7
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 3.1e-37 160.2 91 83.5
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-34 151.8 104 67.3
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 1.5e-31 141.4 90 76.7
HanXRQChr04g0099751 Helianthus annuus HOM05D005969 ORTHO05D007407 1.8e-29 134.4 79 81.0
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 7.8e-28 129.0 75 76.0
CBR_g50568 Chara braunii HOM05D000004 ORTHO05D000002 5.8e-23 112.8 119 47.1
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 3.2e-21 107.1 105 56.2
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 1.1e-18 98.6 74 70.3
BcaB04g17655 Brassica carinata HOM05D005969 ORTHO05D007407 3.6e-17 93.6 58 75.9
Hma1.2p1_0109F.1_g052620 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 8.9e-16 89.0 54 75.9
Glyma.07G022602 Glycine max HOM05D005969 ORTHO05D007407 1.7e-14 84.7 58 72.4
SEGI_03763 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 2.2e-14 84.3 51 74.5
SEGI_15560 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 2.2e-14 84.3 51 74.5
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 1.1e-13 82.0 112 49.1
HanXRQChr14g0426781 Helianthus annuus HOM05D005969 ORTHO05D007407 2.1e-12 77.8 47 78.7
Lj9C492T13 Lonicera japonica HOM05D005969 ORTHO05D007407 7.8e-12 75.9 107 47.7
QL05p035860 Quercus lobata HOM05D005969 ORTHO05D007407 1.0e-11 75.5 91 54.9
PGSC0003DMG400019818 Solanum tuberosum HOM05D005969 ORTHO05D007407 1.0e-11 75.5 95 48.4
Psat6g223920 Pisum sativum HOM05D002710 ORTHO05D002905 3.0e-11 73.9 160 33.1
TPR.G23080 Trifolium pratense HOM05D005969 ORTHO05D007407 3.0e-11 73.9 43 76.7
Potri.003G182801 Populus trichocarpa HOM05D005969 ORTHO05D007407 2.5e-10 70.9 75 52.0
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 3.3e-10 70.5 292 27.7
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 3.6e-09 67.0 280 25.7
HanXRQChr04g0099771 Helianthus annuus HOM05D005969 ORTHO05D007407 3.6e-09 67.0 42 78.6
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.4e-08 65.1 296 25.3
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.4e-08 65.1 296 25.3
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 1.4e-08 65.1 324 25.9
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 1.8e-08 64.7 296 25.3
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 4.0e-08 63.5 281 25.6
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 4.0e-08 63.5 296 25.3
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 4.0e-08 63.5 312 26.3
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 8.9e-08 62.4 281 25.6
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 1.5e-07 61.6 279 25.1
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 1.5e-07 61.6 290 26.2
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 1.5e-07 61.6 282 24.8
arahy.Tifrunner.gnm1.ann1.GZLR9S Arachis hypogaea HOM05D005969 ORTHO05D007407 2.6e-07 60.8 80 45.0
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 5.8e-07 59.7 276 24.6
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 5.8e-07 59.7 291 25.1
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 1.3e-06 58.5 284 23.6
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 3.7e-06 57.0 284 23.2
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 4.9e-06 56.6 287 26.1
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 8.4e-06 55.8 354 24.3


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