Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 4.4e-186 654.4 322 100.0
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 2.6e-114 416.0 326 63.8
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 3.0e-110 402.5 327 64.5
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.3e-108 397.1 327 63.6
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 1.7e-108 396.7 327 63.3
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.8e-107 393.3 327 63.0
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 2.4e-107 392.9 306 63.7
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 6.5e-105 384.8 326 62.9
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.5e-104 381.7 314 62.7
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 5.5e-104 381.7 327 63.6
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 7.2e-104 381.3 323 59.8
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 2.7e-103 379.4 330 61.2
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.8e-102 376.7 327 62.7
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 1.8e-102 376.7 326 61.7
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 5.1e-102 375.2 332 59.9
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.7e-101 371.7 314 61.8
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 5.7e-101 371.7 318 61.0
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 1.3e-100 370.5 327 59.0
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 2.8e-100 369.4 242 73.6
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.8e-100 369.4 332 61.1
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.1e-99 367.5 334 60.8
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 5.3e-99 365.2 313 59.7
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 7.0e-99 364.8 313 59.7
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 1.2e-98 364.0 324 57.7
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.8e-97 359.0 325 60.0
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.9e-96 356.7 325 59.7
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 2.5e-96 356.3 320 58.8
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 4.2e-96 355.5 325 59.7
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 5.5e-96 355.1 327 55.4
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 6.7e-94 348.2 329 58.7
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 8.8e-94 347.8 329 55.9
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 1.5e-93 347.1 311 57.9
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 1.5e-93 347.1 311 57.9
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 3.3e-93 345.9 330 53.9
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 4.4e-93 345.5 298 58.4
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 7.5e-93 344.7 246 67.5
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.3e-92 344.0 244 68.4
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.7e-92 343.6 255 64.7
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 1.7e-92 343.6 322 56.8
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 2.2e-92 343.2 279 61.3
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 2.2e-92 343.2 333 56.5
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 2.8e-92 342.8 321 57.6
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 3.7e-92 342.4 330 55.8
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 6.3e-92 341.7 247 68.0
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.1e-91 340.9 261 64.4
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 1.8e-91 340.1 328 57.0
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 1.8e-91 340.1 315 56.8
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 2.4e-91 339.7 300 56.7
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.4e-91 339.7 324 56.8
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 3.1e-91 339.3 274 63.1
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 3.1e-91 339.3 280 59.3
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 3.1e-91 339.3 248 65.7
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 5.3e-91 338.6 330 57.3
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 5.3e-91 338.6 322 54.7
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.6e-90 337.0 301 59.1
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 2.0e-90 336.7 247 66.8
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 2.7e-90 336.3 244 66.8
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 3.5e-90 335.9 244 66.8
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 3.5e-90 335.9 313 56.2
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 5.9e-90 335.1 245 66.1
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 1.0e-89 334.3 327 54.7
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 1.0e-89 334.3 320 56.9
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 1.0e-89 334.3 249 65.5
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 1.7e-89 333.6 329 55.0
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.2e-89 333.2 228 71.9
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 3.8e-89 332.4 329 54.1
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 1.1e-88 330.9 335 54.0
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.5e-88 330.5 294 57.5
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 3.2e-88 329.3 253 64.0
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 9.4e-88 327.8 263 62.7
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 4.7e-87 325.5 262 59.9
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 8.0e-87 324.7 246 63.8
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 8.0e-87 324.7 246 64.6
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 1.0e-86 324.3 326 53.4
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.4e-86 323.9 330 53.6
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.4e-86 323.9 330 53.6
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 1.8e-86 323.6 326 50.9
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 2.3e-86 323.2 266 62.0
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.2e-85 320.9 309 55.0
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 2.0e-85 320.1 263 61.6
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 5.7e-85 318.5 316 52.8
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 1.7e-84 317.0 266 58.6
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 2.8e-84 316.2 263 61.2
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 4.5e-82 308.9 241 61.8
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 5.0e-81 305.4 243 60.5
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.5e-80 303.9 324 49.1
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 5.5e-80 302.0 393 45.8
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 5.5e-80 302.0 257 58.4
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.6e-79 300.4 240 60.4
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 2.3e-78 296.6 275 57.8
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 2.3e-78 296.6 333 49.5
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 2.3e-78 296.6 268 55.2
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 4.0e-78 295.8 307 52.8
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 2.2e-76 290.0 326 49.1
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 2.4e-75 286.6 219 63.9
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 2.0e-74 283.5 237 58.2
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.7e-73 280.4 225 64.4
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 6.8e-70 268.5 234 55.6
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 4.7e-63 245.7 237 51.9
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 8.9e-62 241.5 170 69.4
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 9.2e-59 231.5 276 49.6
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 5.2e-54 215.7 226 50.9
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.4e-51 207.6 159 66.0
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 2.4e-51 206.8 145 70.3
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 5.6e-48 195.7 257 45.1
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 7.3e-48 195.3 246 42.7
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 2.1e-47 193.7 244 44.3
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.1e-47 191.8 204 53.9
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 3.1e-46 189.9 242 42.6
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 6.8e-46 188.7 199 54.3
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.7e-44 184.1 138 64.5
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 3.2e-43 179.9 142 63.4
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 3.0e-41 173.3 157 54.1
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 5.1e-41 172.6 259 38.2
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 3.3e-40 169.9 132 62.1
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 1.2e-39 167.9 139 57.6
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 3.4e-37 159.8 117 65.0
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 7.1e-35 152.1 170 51.2
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.1e-32 144.8 141 51.1
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 1.3e-31 141.4 100 68.0
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 2.1e-26 124.0 109 60.6
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 9.9e-21 105.1 178 38.8
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.5e-18 96.7 64 75.0
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 1.7e-12 77.8 77 54.5
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 2.7e-10 70.5 77 53.2


User provided reference genes

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