Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G2034 Cannabis sativa HOM05D006879 ORTHO05D008452 9.6e-65 250.0 124 100.0
QL09p034330 Quercus lobata HOM05D006879 ORTHO05D008452 1.2e-38 163.3 113 69.9
QL09p034374 Quercus lobata HOM05D006879 ORTHO05D008452 1.2e-38 163.3 113 69.9
Dinv07211 Davidia involucrata HOM05D006879 ORTHO05D008452 4.5e-38 161.4 113 69.9
Cfa016025 Carpinus fangiana HOM05D006879 ORTHO05D008452 1.3e-37 159.8 120 66.7
CiPaw.06G031600 Carya illinoinensis HOM05D006879 ORTHO05D008452 1.7e-37 159.5 112 70.5
Haze_00431 Corylus avellana HOM05D000586 ORTHO05D008452 3.8e-37 158.3 113 69.9
Atru.chr13.1490 Acer truncatum HOM05D006879 ORTHO05D008452 6.5e-37 157.5 117 65.0
Ciclev10002899m.g Citrus clementina HOM05D006879 ORTHO05D008452 1.1e-36 156.8 112 67.0
Manes.02G164300 Manihot esculenta HOM05D006879 ORTHO05D008452 1.1e-36 156.8 114 66.7
Thecc.08G126700 Theobroma cacao HOM05D006879 ORTHO05D008452 1.4e-36 156.4 112 67.9
CSS0011792 Camellia sinensis var. sinensis HOM05D006879 ORTHO05D008452 1.9e-36 156.0 113 66.4
Dinv27305 Davidia involucrata HOM05D006879 ORTHO05D008452 2.5e-36 155.6 110 70.0
Eucgr.F03793 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.5e-36 155.6 118 61.0
Prupe.1G494800 Prunus persica HOM05D006879 ORTHO05D008452 2.5e-36 155.6 117 66.7
Gohir.A01G189200 Gossypium hirsutum HOM05D006879 ORTHO05D008452 5.5e-36 154.5 112 68.8
RcHm_v2.0_Chr6g0295961 Rosa chinensis HOM05D006879 ORTHO05D008452 5.5e-36 154.5 116 63.8
Hund17297 Selenicereus undatus HOM05D006879 ORTHO05D008452 1.2e-35 153.3 120 64.2
Gohir.D01G180300 Gossypium hirsutum HOM05D006879 ORTHO05D008452 1.6e-35 152.9 112 67.9
PGR083G2398 Punica granatum HOM05D006879 ORTHO05D008452 1.6e-35 152.9 113 65.5
FvH4_2g27080 Fragaria vesca HOM05D006879 ORTHO05D008452 2.1e-35 152.5 113 64.6
FAN20G0093 Fragaria x ananassa HOM05D006879 ORTHO05D008452 2.1e-35 152.5 113 65.5
AUR62014329 Chenopodium quinoa HOM05D006879 ORTHO05D008452 2.7e-35 152.1 112 65.2
FAN24G0949 Fragaria x ananassa HOM05D006879 ORTHO05D008452 3.6e-35 151.8 113 64.6
COL.COLO4_03398 Corchorus olitorius HOM05D006879 ORTHO05D008452 1.4e-34 149.8 108 67.6
Duzib041G0788 Durio zibethinus HOM05D006879 ORTHO05D008452 2.3e-34 149.1 112 64.3
AUR62019072 Chenopodium quinoa HOM05D006879 ORTHO05D008452 3.0e-34 148.7 112 62.5
Lj1g0005641 Lotus japonicus HOM05D006879 ORTHO05D008452 3.0e-34 148.7 118 64.4
Sc02g0005010 Simmondsia chinensis HOM05D006879 ORTHO05D008452 3.0e-34 148.7 118 62.7
Nitab4.5_0004334g0040 Nicotiana tabacum HOM05D006879 ORTHO05D008452 3.9e-34 148.3 111 63.1
Sed0023358 Sechium edule HOM05D006879 ORTHO05D008452 3.9e-34 148.3 112 62.5
CsaV3_4G028290 Cucumis sativus L. HOM05D006879 ORTHO05D008452 5.1e-34 147.9 112 61.6
Glyma.14G151700 Glycine max HOM05D006879 ORTHO05D008452 5.1e-34 147.9 110 67.3
Aqoxy6G00233 Aquilegia oxysepala HOM05D006879 ORTHO05D008452 8.8e-34 147.1 112 63.4
MELO3C010476.2 Cucumis melo HOM05D006879 ORTHO05D008452 8.8e-34 147.1 112 61.6
Gorai.002G222300 Gossypium raimondii HOM05D006879 ORTHO05D008452 8.8e-34 147.1 112 65.2
Nn5g28321 Nelumbo nucifera HOM05D006879 ORTHO05D008452 8.8e-34 147.1 116 59.5
Nitab4.5_0005583g0080 Nicotiana tabacum HOM05D006879 ORTHO05D008452 1.1e-33 146.7 111 63.1
HanXRQChr03g0088981 Helianthus annuus HOM05D006879 ORTHO05D008452 1.5e-33 146.4 113 62.8
Aa31LG4G7630 Aethionema arabicum HOM05D006879 ORTHO05D008452 2.0e-33 146.0 112 63.4
arahy.Tifrunner.gnm1.ann1.0SZ2NS Arachis hypogaea HOM05D006879 ORTHO05D008452 2.0e-33 146.0 105 69.5
arahy.Tifrunner.gnm1.ann1.61DA9N Arachis hypogaea HOM05D006879 ORTHO05D008452 2.0e-33 146.0 105 69.5
arahy.Tifrunner.gnm1.ann1.GV74HV Arachis hypogaea HOM05D006879 ORTHO05D008452 2.0e-33 146.0 105 69.5
VMungo0647G0471 Vigna mungo HOM05D006879 ORTHO05D008452 2.0e-33 146.0 108 69.4
EL10Ac1g01022 Beta vulgaris HOM05D006879 ORTHO05D008452 3.3e-33 145.2 120 60.0
THA.LOC104813659 Tarenaya hassleriana HOM05D006879 ORTHO05D008452 4.4e-33 144.8 112 65.2
Phvul.008G160300 Phaseolus vulgaris HOM05D006879 ORTHO05D008452 7.4e-33 144.1 108 68.5
Potri.005G178501 Populus trichocarpa HOM05D006879 ORTHO05D008452 9.7e-33 143.7 112 66.1
MD15G1347100 Malus domestica HOM05D006879 ORTHO05D008452 1.3e-32 143.3 107 69.2
Sopen08g021740 Solanum pennellii HOM05D006879 ORTHO05D008452 1.3e-32 143.3 111 61.3
Cc10_g12010 Coffea canephora HOM05D006879 ORTHO05D008452 1.7e-32 142.9 112 60.7
Thhalv10019334m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.7e-32 142.9 117 60.7
Lsat_1_v5_gn_6_93360 Lactuca sativa HOM05D006879 ORTHO05D008452 1.7e-32 142.9 109 63.3
ClCG11G015720 Citrullus lanatus HOM05D006879 ORTHO05D008452 2.2e-32 142.5 124 57.3
Solyc08g067800.3 Solanum lycopersicum HOM05D006879 ORTHO05D008452 2.2e-32 142.5 111 60.4
TAR628G0734 Trochodendron aralioides HOM05D006879 ORTHO05D008452 2.2e-32 142.5 105 65.7
Hma1.2p1_0054F.1_g031040 Hydrangea macrophylla HOM05D006879 ORTHO05D008452 3.7e-32 141.7 113 59.3
AL2G37750 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 8.2e-32 140.6 116 59.5
Sp5g32720 Schrenkiella parvula HOM05D006879 ORTHO05D008452 1.1e-31 140.2 113 59.3
TWI32G0821 Tripterygium wilfordii HOM05D006879 ORTHO05D008452 1.1e-31 140.2 104 66.3
AT1G77540 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 1.4e-31 139.8 116 59.5
Carub.0002s2444 Capsella rubella HOM05D006879 ORTHO05D008452 1.8e-31 139.4 112 61.6
Medtr3g088570 Medicago truncatula HOM05D006879 ORTHO05D008452 1.8e-31 139.4 105 66.7
Lalb_Chr11g0066061 Lupinus albus HOM05D006879 ORTHO05D008452 2.4e-31 139.0 112 62.5
Migut.C01128 Erythranthe guttata HOM05D006879 ORTHO05D008452 4.1e-31 138.3 113 60.2
BcaB02g07111 Brassica carinata HOM05D006879 ORTHO05D008452 5.3e-31 137.9 120 58.3
CAN.G21.5 Capsicum annuum HOM05D006879 ORTHO05D008452 5.3e-31 137.9 112 59.8
CDE07G0981 Ceratophyllum demersum HOM05D006879 ORTHO05D008452 7.0e-31 137.5 113 58.4
MSTRG.25382 Avicennia marina HOM05D006879 ORTHO05D008452 1.6e-30 136.3 117 58.1
C06p31190 Brassica napus HOM05D006879 ORTHO05D008452 2.0e-30 136.0 120 58.3
BcaC08g45472 Brassica carinata HOM05D006879 ORTHO05D008452 2.6e-30 135.6 120 57.5
BolC6t38260H Brassica oleracea HOM05D006879 ORTHO05D008452 2.6e-30 135.6 120 57.5
ECA240G3722 Erigeron canadensis HOM05D006879 ORTHO05D008452 2.6e-30 135.6 109 61.5
Actinidia03466 Actinidia chinensis HOM05D006879 ORTHO05D008452 4.5e-30 134.8 112 56.2
BraA07t30441Z Brassica rapa HOM05D006879 ORTHO05D008452 5.9e-30 134.4 120 57.5
A07p27940 Brassica napus HOM05D006879 ORTHO05D008452 7.7e-30 134.0 120 57.5
BcaB07g32176 Brassica carinata HOM05D006879 ORTHO05D008452 1.0e-29 133.7 112 58.0
CARHR071070 Cardamine hirsuta HOM05D006879 ORTHO05D008452 1.0e-29 133.7 113 59.3
BolC5t30777H Brassica oleracea HOM05D006879 ORTHO05D008452 1.3e-29 133.3 112 58.9
Ca_28182_v3 Cicer arietinum L. HOM05D006879 ORTHO05D008452 1.7e-29 132.9 103 66.0
Thhalv10009164m.g Eutrema salsugineum HOM05D006879 ORTHO05D008452 1.7e-29 132.9 110 60.9
FAN15G3590 Fragaria x ananassa HOM05D006879 ORTHO05D008452 5.0e-29 131.3 148 48.6
Aa31LG7G5750 Aethionema arabicum HOM05D006879 ORTHO05D008452 8.5e-29 130.6 109 59.6
BcaC05g26099 Brassica carinata HOM05D006879 ORTHO05D008452 8.5e-29 130.6 112 58.0
SGA_v2.0_scaffold52G18964 Striga asiatica HOM05D006879 ORTHO05D008452 8.5e-29 130.6 112 55.4
A06p17880 Brassica napus HOM05D006879 ORTHO05D008452 1.5e-28 129.8 112 58.0
BraA06t24878Z Brassica rapa HOM05D006879 ORTHO05D008452 1.5e-28 129.8 112 58.0
Carub.0001s2123 Capsella rubella HOM05D006879 ORTHO05D008452 1.9e-28 129.4 114 57.9
PSO170G0506 Papaver somniferum HOM05D006879 ORTHO05D008452 2.5e-28 129.0 111 57.7
Sp1g19330 Schrenkiella parvula HOM05D006879 ORTHO05D008452 2.5e-28 129.0 114 57.9
PSO528G0112 Papaver somniferum HOM05D006879 ORTHO05D008452 5.5e-28 127.9 111 55.0
C05p20780 Brassica napus HOM05D006879 ORTHO05D008452 9.4e-28 127.1 112 58.0
AL1G34970 Arabidopsis lyrata HOM05D006879 ORTHO05D008452 1.2e-27 126.7 108 59.3
Psat5g086200 Pisum sativum HOM05D006879 ORTHO05D008452 1.2e-27 126.7 109 59.6
ATR0584G146 Amborella trichopoda HOM05D006879 ORTHO05D008452 1.6e-27 126.3 104 57.7
AT1G21770 Arabidopsis thaliana HOM05D006879 ORTHO05D008452 4.7e-27 124.8 108 58.3
Cpa.g.sc418.6 Carica papaya HOM05D006879 ORTHO05D008452 4.0e-26 121.7 91 64.8
GSVIVG01008857001 Vitis vinifera HOM05D006879 ORTHO05D008452 8.8e-26 120.6 66 81.8
Oeu059437.1 Olea europaea HOM05D006879 ORTHO05D008452 1.7e-24 116.3 66 72.7
RhsimUnG0092300 Rhododendron simsii HOM05D000586 ORTHO05D008452 1.2e-22 110.2 91 61.5
CAN.G21.4 Capsicum annuum HOM05D006879 ORTHO05D008452 3.5e-22 108.6 113 45.1
SEGI_19819 Sequoiadendron giganteum HOM05D006879 ORTHO05D008452 3.5e-22 108.6 88 60.2
vmacro00838 Vaccinium macrocarpon HOM05D006879 ORTHO05D008452 3.5e-22 108.6 91 59.3
TPR.G20905 Trifolium pratense HOM05D006879 ORTHO05D008452 5.9e-22 107.8 88 64.8
AagrBONN_evm.TU.Sc2ySwM_117.2168 Anthoceros agrestis HOM05D006879 ORTHO05D008452 7.7e-22 107.5 111 49.5
Mapoly0075s0062 Marchantia polymorpha HOM05D006879 ORTHO05D008452 7.7e-22 107.5 115 47.8
Ah.05g171050 Amaranthus hybridus HOM05D006879 ORTHO05D008452 3.8e-21 105.1 98 57.1
Pp3c12_9490 Physcomitrium patens HOM05D006879 ORTHO05D008452 3.8e-21 105.1 107 50.5
Zm00001eb082730 Zea mays HOM05D006879 ORTHO05D008452 2.5e-20 102.4 106 49.1
Os04g0431300 Oryza sativa ssp. japonica HOM05D006879 ORTHO05D008452 2.1e-19 99.4 86 55.8
Peaxi162Scf00332g00015 Petunia axillaris HOM05D006879 ORTHO05D008452 2.3e-18 95.9 78 65.4
SMO146G0286 Selaginella moellendorffii HOM05D006879 ORTHO05D008452 3.0e-18 95.5 103 44.7
HanXRQChr01g0005251 Helianthus annuus HOM05D006879 ORTHO05D008452 9.8e-17 90.5 78 60.3
HanXRQChr04g0101301 Helianthus annuus HOM05D006879 ORTHO05D008452 3.7e-16 88.6 77 61.0
CBR_g36233 Chara braunii HOM05D006879 ORTHO05D008452 1.7e-13 79.7 155 32.3
Eucgr.H03927 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.9e-13 79.0 106 43.4
HanXRQChr09g0244451 Helianthus annuus HOM05D006879 ORTHO05D008452 4.7e-11 71.6 61 55.7
Eucgr.H03925 Eucalyptus grandis HOM05D006879 ORTHO05D008452 2.8e-08 62.4 63 52.4


User provided reference genes

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