Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1960 Cannabis sativa HOM05D002526 ORTHO05D010157 7.2e-156 553.9 287 100.0
TWI18G0347 Tripterygium wilfordii HOM05D002526 ORTHO05D010157 3.4e-81 305.8 271 60.5
CiPaw.01G248800 Carya illinoinensis HOM05D002526 ORTHO05D004039 8.4e-80 301.2 281 61.2
Dinv30612 Davidia involucrata HOM05D002526 ORTHO05D004039 7.1e-79 298.1 284 58.8
Hma1.2p1_0242F.1_g100630 Hydrangea macrophylla HOM05D002526 ORTHO05D010157 3.5e-78 295.8 286 58.0
Prupe.3G088600 Prunus persica HOM05D002526 ORTHO05D010157 7.9e-78 294.7 295 59.3
CSS0025449 Camellia sinensis var. sinensis HOM05D002526 ORTHO05D004039 1.5e-76 290.4 283 55.8
FvH4_6g29541 Fragaria vesca HOM05D002526 ORTHO05D010157 4.3e-76 288.9 246 63.4
FAN14G4319 Fragaria x ananassa HOM05D002526 ORTHO05D010157 4.3e-76 288.9 246 63.4
RcHm_v2.0_Chr2g0135091 Rosa chinensis HOM05D002526 ORTHO05D010157 9.6e-76 287.7 294 57.1
QL03p020400 Quercus lobata HOM05D002526 ORTHO05D010157 2.0e-73 280.0 275 58.5
QL05p030835 Quercus lobata HOM05D002526 ORTHO05D010157 2.0e-73 280.0 275 58.5
Thecc.06G028700 Theobroma cacao HOM05D002526 ORTHO05D010157 7.6e-73 278.1 281 55.9
Atru.chr1.2906 Acer truncatum HOM05D002526 ORTHO05D010157 3.8e-72 275.8 293 55.6
Haze_16568 Corylus avellana HOM05D002526 ORTHO05D004039 4.9e-72 275.4 282 57.8
Ciclev10024867m.g Citrus clementina HOM05D002526 ORTHO05D004039 1.1e-71 274.2 282 53.9
Potri.001G202300 Populus trichocarpa HOM05D002526 ORTHO05D010157 1.1e-71 274.2 262 58.0
Manes.04G112150 Manihot esculenta HOM05D002526 ORTHO05D004039 1.9e-71 273.5 280 56.8
vmacro19003 Vaccinium macrocarpon HOM05D002526 ORTHO05D010157 4.2e-71 272.3 294 52.7
GSVIVG01017348001 Vitis vinifera HOM05D002526 ORTHO05D004039 1.2e-70 270.8 293 51.2
Hund00650 Selenicereus undatus HOM05D002526 ORTHO05D010157 1.6e-70 270.4 247 60.3
Hund00651 Selenicereus undatus HOM05D002526 ORTHO05D010157 6.0e-70 268.5 247 59.9
Actinidia15756 Actinidia chinensis HOM05D002526 ORTHO05D010157 1.3e-69 267.3 285 54.4
MD17G1213300 Malus domestica HOM05D002526 ORTHO05D010157 2.3e-69 266.5 284 54.6
Nn2g12105 Nelumbo nucifera HOM05D002526 ORTHO05D010157 4.8e-67 258.8 270 54.8
Nitab4.5_0003463g0050 Nicotiana tabacum HOM05D001442 ORTHO05D001369 1.4e-66 257.3 286 50.3
Cc04_g04450 Coffea canephora HOM05D002526 ORTHO05D010157 2.4e-66 256.5 286 51.4
Peaxi162Scf00332g00625 Petunia axillaris HOM05D002526 ORTHO05D010157 5.3e-66 255.4 288 50.3
Duzib192G0551 Durio zibethinus HOM05D002526 ORTHO05D010157 5.9e-65 251.9 233 59.2
Nitab4.5_0008560g0050 Nicotiana tabacum HOM05D001442 ORTHO05D010157 3.8e-64 249.2 286 49.0
Lj5A73G68 Lonicera japonica HOM05D002526 ORTHO05D010157 8.5e-64 248.1 286 51.0
CAN.G407.78 Capsicum annuum HOM05D002526 ORTHO05D000105 2.5e-63 246.5 288 49.3
SGA_v2.0_scaffold5G02704 Striga asiatica HOM05D002526 ORTHO05D010157 5.5e-63 245.4 265 51.3
Gohir.A05G122650 Gossypium hirsutum HOM05D002526 ORTHO05D010157 2.1e-62 243.4 228 58.3
COL.COLO4_11933 Corchorus olitorius HOM05D002526 ORTHO05D004039 3.6e-62 242.7 235 58.3
Gorai.009G127500 Gossypium raimondii HOM05D002526 ORTHO05D010157 3.6e-62 242.7 295 49.2
Solyc03g116770.3 Solanum lycopersicum HOM05D002526 ORTHO05D010157 1.1e-60 237.7 233 54.1
Sopen03g035690 Solanum pennellii HOM05D002526 ORTHO05D010157 2.5e-60 236.5 233 53.6
PGSC0003DMG400000622 Solanum tuberosum HOM05D002526 ORTHO05D010157 4.3e-60 235.7 266 50.0
THA.LOC104812514 Tarenaya hassleriana HOM05D002526 ORTHO05D010157 7.4e-60 235.0 234 54.3
FAN02G2169 Fragaria x ananassa HOM05D002526 ORTHO05D010157 9.7e-60 234.6 206 61.2
Sp1g13640 Schrenkiella parvula HOM05D002526 ORTHO05D010157 9.7e-60 234.6 244 52.9
Carub.0001s1507 Capsella rubella HOM05D002526 ORTHO05D010157 2.2e-59 233.4 233 52.8
AL1G27410 Arabidopsis lyrata HOM05D002526 ORTHO05D010157 3.7e-59 232.6 284 46.8
Thhalv10008365m.g Eutrema salsugineum HOM05D002526 ORTHO05D010157 1.1e-58 231.1 286 47.9
BolC5t30082H Brassica oleracea HOM05D002526 ORTHO05D010157 1.5e-57 227.3 226 54.0
Oeu045127.1 Olea europaea HOM05D002526 ORTHO05D010157 1.5e-57 227.3 218 56.4
A06p11330 Brassica napus HOM05D002526 ORTHO05D010157 2.0e-57 226.9 226 54.0
BraA06t24312Z Brassica rapa HOM05D002526 ORTHO05D010157 2.0e-57 226.9 233 52.8
CARHR015850 Cardamine hirsuta HOM05D002526 ORTHO05D010157 3.4e-57 226.1 242 50.0
Aa31LG7G90 Aethionema arabicum HOM05D002526 ORTHO05D010157 5.9e-57 225.3 233 52.4
AT1G15320 Arabidopsis thaliana HOM05D002526 ORTHO05D010157 1.4e-55 220.7 232 51.7
Aqoxy7G03644 Aquilegia oxysepala HOM05D002526 ORTHO05D010157 9.4e-55 218.0 260 50.0
Lsat_1_v5_gn_4_88500 Lactuca sativa HOM05D002526 ORTHO05D010157 2.1e-54 216.9 261 47.1
Migut.I00757 Erythranthe guttata HOM05D002526 ORTHO05D010157 4.7e-54 215.7 284 44.4
SalBow2G1951 Salvia bowleyana HOM05D002526 ORTHO05D010157 1.0e-53 214.5 276 46.0
Actinidia01740 Actinidia chinensis HOM05D002526 ORTHO05D010157 1.4e-53 214.2 267 49.4
AUR62011678 Chenopodium quinoa HOM05D002526 ORTHO05D010157 3.0e-53 213.0 279 48.0
AUR62016503 Chenopodium quinoa HOM05D002526 ORTHO05D010157 1.1e-52 211.1 279 47.3
Sc15g0001450 Simmondsia chinensis HOM05D002526 ORTHO05D010157 4.4e-52 209.1 232 50.9
ECA232G1362 Erigeron canadensis HOM05D002526 ORTHO05D010157 1.3e-51 207.6 279 46.6
BcaC05g25469 Brassica carinata HOM05D002526 ORTHO05D010157 1.1e-50 204.5 226 50.4
EL10Ac9g22041 Beta vulgaris HOM05D002526 ORTHO05D010157 3.1e-50 203.0 259 47.5
PSO161G0040 Papaver somniferum HOM05D002526 ORTHO05D010157 2.6e-49 199.9 246 50.0
PGR102G2637 Punica granatum HOM05D002526 ORTHO05D010157 5.0e-48 195.7 276 42.4
DCAR_025516 Daucus carota HOM05D002526 ORTHO05D004039 1.5e-44 184.1 239 45.6
C05p13450 Brassica napus HOM05D002526 ORTHO05D010157 3.1e-42 176.4 183 52.5
Gohir.D05G123550 Gossypium hirsutum HOM05D002526 ORTHO05D010157 7.0e-42 175.3 183 53.6
Ah.01g021710 Amaranthus hybridus HOM05D002526 ORTHO05D010157 1.4e-37 161.0 225 44.9
FAN02G0105 Fragaria x ananassa HOM05D002526 ORTHO05D010157 1.7e-32 144.1 105 71.4
unitig_0.g1112 Utricularia gibba HOM05D002081 ORTHO05D002088 2.2e-32 143.7 222 40.1
Cpa.g.sc938.3 Carica papaya HOM05D002526 ORTHO05D010157 8.8e-29 131.7 230 40.9
BcaC03g16017 Brassica carinata HOM05D002526 ORTHO05D010157 6.6e-24 115.5 83 63.9
BcaC01g00573 Brassica carinata HOM05D002526 ORTHO05D010157 4.2e-23 112.8 99 56.6
SEGI_27567 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 3.9e-16 89.7 225 26.7
BcaC02g09864 Brassica carinata HOM05D002526 ORTHO05D010157 1.9e-15 87.4 69 59.4
C04p35770 Brassica napus HOM05D002526 ORTHO05D010157 1.9e-15 87.4 69 59.4
C09p66980 Brassica napus HOM05D002526 ORTHO05D010157 1.9e-15 87.4 69 59.4
BolC2t09789H Brassica oleracea HOM05D002526 ORTHO05D010157 1.9e-15 87.4 69 59.4
BolC4t25223H Brassica oleracea HOM05D002526 ORTHO05D010157 1.9e-15 87.4 69 59.4
SEGI_30845 Sequoiadendron giganteum HOM05D002526 ORTHO05D010157 2.5e-15 87.0 223 26.5
C02p37700 Brassica napus HOM05D002526 ORTHO05D010157 5.6e-15 85.9 69 58.0
C03p81490 Brassica napus HOM05D002526 ORTHO05D010157 1.0e-13 81.6 85 49.4
BolC3t20420H Brassica oleracea HOM05D002526 ORTHO05D010157 1.0e-13 81.6 85 49.4
COL.COLO4_12110 Corchorus olitorius HOM05D001914 ORTHO05D000623 3.3e-07 60.1 242 26.4
BolC3t19789H Brassica oleracea HOM05D002526 ORTHO05D010157 7.3e-07 58.9 45 62.2
C03p75300 Brassica napus HOM05D002526 ORTHO05D010157 1.2e-06 58.2 71 47.9
FAN28G2246 Fragaria x ananassa HOM05D000828 ORTHO05D000623 2.1e-06 57.4 215 26.0
HanXRQChr11g0330981 Helianthus annuus HOM05D000828 ORTHO05D000623 2.1e-06 57.4 191 27.2
Peaxi162Scf00111g00149 Petunia axillaris HOM05D000828 ORTHO05D000623 2.8e-06 57.0 205 25.4
Duzib213G0788 Durio zibethinus HOM05D000828 ORTHO05D000623 4.7e-06 56.2 201 26.9
Lsat_1_v5_gn_7_102580 Lactuca sativa HOM05D000828 ORTHO05D000623 6.2e-06 55.8 209 24.4
Medtr2g076140 Medicago truncatula HOM05D000828 ORTHO05D000623 8.0e-06 55.5 226 26.5


User provided reference genes

Program Settings