Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1926 Cannabis sativa HOM05D007333 ORTHO05D008874 4.7e-73 277.7 136 100.0
Prupe.2G091100 Prunus persica HOM05D007333 ORTHO05D008874 8.2e-33 144.1 134 56.0
CiPaw.14G027900 Carya illinoinensis HOM05D007333 ORTHO05D008874 2.3e-27 125.9 134 47.8
RcHm_v2.0_Chr1g0334731 Rosa chinensis HOM05D007333 ORTHO05D008874 1.1e-26 123.6 134 48.5
FAN03G1611 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.3e-25 117.9 138 45.7
FAN06G2923 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.3e-25 117.9 138 45.7
FAN10G2394 Fragaria x ananassa HOM05D007333 ORTHO05D008874 6.3e-25 117.9 138 45.7
FAN01G0324 Fragaria x ananassa HOM05D007333 ORTHO05D008874 1.4e-24 116.7 138 45.7
TWI38G1382 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 1.5e-23 113.2 124 50.8
TWI63G0473 Tripterygium wilfordii HOM05D007333 ORTHO05D008874 5.9e-23 111.3 130 48.5
Manes.10G054600 Manihot esculenta HOM05D007333 ORTHO05D008874 4.2e-21 105.1 128 46.1
PGR044G2090 Punica granatum HOM05D007333 ORTHO05D008874 5.5e-21 104.8 140 45.7
Manes.07G092300 Manihot esculenta HOM05D007333 ORTHO05D008874 1.6e-20 103.2 138 44.2
Potri.010G233400 Populus trichocarpa HOM05D007333 ORTHO05D008874 2.7e-20 102.4 136 45.6
Duzib114G0443 Durio zibethinus HOM05D007333 ORTHO05D008874 1.8e-19 99.8 138 42.8
Sed0000251 Sechium edule HOM05D007333 ORTHO05D008874 2.3e-19 99.4 110 49.1
Dinv31280 Davidia involucrata HOM05D007333 ORTHO05D008874 3.9e-19 98.6 132 41.7
Thecc.10G097500 Theobroma cacao HOM05D007333 ORTHO05D008874 3.9e-19 98.6 136 42.6
Cpa.g.sc128.62 Carica papaya HOM05D007333 ORTHO05D008874 6.7e-19 97.8 141 41.1
Gohir.D05G290801 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.9e-18 96.3 137 40.9
Gorai.009G305900 Gossypium raimondii HOM05D007333 ORTHO05D008874 1.9e-18 96.3 137 40.9
Ciclev10032982m.g Citrus clementina HOM05D007333 ORTHO05D008874 2.5e-18 95.9 144 42.4
Lsat_1_v5_gn_8_23060 Lactuca sativa HOM05D007333 ORTHO05D008874 2.5e-18 95.9 116 43.1
ClCG08G008020 Citrullus lanatus HOM05D007333 ORTHO05D008874 9.7e-18 94.0 134 44.0
Lalb_Chr06g0170141 Lupinus albus HOM05D007333 ORTHO05D008874 2.8e-17 92.4 126 40.5
Duzib128G0626 Durio zibethinus HOM05D007333 ORTHO05D008874 6.3e-17 91.3 136 39.7
MELO3C019874.2 Cucumis melo HOM05D007333 ORTHO05D008874 1.4e-16 90.1 123 42.3
CsaV3_2G032900 Cucumis sativus L. HOM05D007333 ORTHO05D008874 1.4e-16 90.1 126 42.9
Dinv20855 Davidia involucrata HOM05D007333 ORTHO05D008874 1.4e-16 90.1 130 37.7
Gohir.A05G289401 Gossypium hirsutum HOM05D007333 ORTHO05D008874 1.4e-16 90.1 137 39.4
Lj5g0012880 Lotus japonicus HOM05D007333 ORTHO05D008874 1.8e-16 89.7 124 41.9
Eucgr.J01027 Eucalyptus grandis HOM05D007333 ORTHO05D008874 2.4e-16 89.4 70 60.0
Aa31LG10G7320 Aethionema arabicum HOM05D007333 ORTHO05D008874 3.1e-16 89.0 111 45.9
GSVIVG01034686001 Vitis vinifera HOM05D007333 ORTHO05D008874 4.1e-16 88.6 117 37.6
Lalb_Chr21g0313181 Lupinus albus HOM05D007333 ORTHO05D008874 5.3e-16 88.2 121 43.0
Nitab4.5_0000593g0040 Nicotiana tabacum HOM05D007333 ORTHO05D008874 5.3e-16 88.2 146 37.0
Haze_02631 Corylus avellana HOM05D007333 ORTHO05D008874 6.9e-16 87.8 129 41.9
Atru.chr12.950 Acer truncatum HOM05D007333 ORTHO05D008874 9.1e-16 87.4 129 44.2
Ah.06g184540 Amaranthus hybridus HOM05D007333 ORTHO05D008874 2.0e-15 86.3 130 40.8
vmacro10268 Vaccinium macrocarpon HOM05D007333 ORTHO05D008874 2.0e-15 86.3 107 39.3
Actinidia38900 Actinidia chinensis HOM05D007333 ORTHO05D008874 2.6e-15 85.9 120 41.7
Sc20g0001370 Simmondsia chinensis HOM05D007333 ORTHO05D008874 3.4e-15 85.5 136 38.2
Carub.0005s1859 Capsella rubella HOM05D007333 ORTHO05D008874 5.9e-15 84.7 108 47.2
Migut.F01662 Erythranthe guttata HOM05D007333 ORTHO05D008874 5.9e-15 84.7 134 38.1
HanXRQChr08g0218141 Helianthus annuus HOM05D007333 ORTHO05D008874 1.0e-14 84.0 115 44.3
Actinidia34782 Actinidia chinensis HOM05D007333 ORTHO05D008874 1.7e-14 83.2 126 42.9
Nitab4.5_0003408g0030 Nicotiana tabacum HOM05D007333 ORTHO05D008874 1.7e-14 83.2 147 36.7
Cfa011213 Carpinus fangiana HOM05D018442 ORTHO05D020347 2.2e-14 82.8 102 44.1
Cc02_g10320 Coffea canephora HOM05D007333 ORTHO05D008874 2.2e-14 82.8 139 36.7
COL.COLO4_34172 Corchorus olitorius HOM05D007333 ORTHO05D008874 2.2e-14 82.8 133 39.8
Glyma.10G201500 Glycine max HOM05D007333 ORTHO05D008874 2.2e-14 82.8 117 41.9
arahy.Tifrunner.gnm1.ann1.YB4FNL Arachis hypogaea HOM05D007333 ORTHO05D008874 2.9e-14 82.4 132 37.9
Peaxi162Scf00398g00057 Petunia axillaris HOM05D007333 ORTHO05D008874 2.9e-14 82.4 142 35.2
arahy.Tifrunner.gnm1.ann1.N9I1MN Arachis hypogaea HOM05D007333 ORTHO05D008874 3.8e-14 82.0 132 37.1
Ca_10485_v3 Cicer arietinum L. HOM05D007333 ORTHO05D008874 3.8e-14 82.0 124 37.1
Hma1.2p1_0567F.1_g180010 Hydrangea macrophylla HOM05D007333 ORTHO05D008874 5.0e-14 81.6 103 40.8
Phvul.007G105600 Phaseolus vulgaris HOM05D007333 ORTHO05D008874 5.0e-14 81.6 134 38.1
THA.LOC104823559 Tarenaya hassleriana HOM05D007333 ORTHO05D008874 8.5e-14 80.9 130 39.2
ECA233G0976 Erigeron canadensis HOM05D007333 ORTHO05D008874 1.4e-13 80.1 117 41.9
Sabra10G0181000 Salix brachista HOM05D007333 ORTHO05D008874 1.4e-13 80.1 156 35.9
Solyc11g007680.2 Solanum lycopersicum HOM05D007333 ORTHO05D008874 1.4e-13 80.1 147 34.0
DCAR_019045 Daucus carota HOM05D007333 ORTHO05D008874 3.2e-13 79.0 123 38.2
AL5G32820 Arabidopsis lyrata HOM05D007333 ORTHO05D008874 4.2e-13 78.6 139 36.0
Glyma.20G188900 Glycine max HOM05D007333 ORTHO05D008874 4.2e-13 78.6 130 36.2
Oeu015044.1 Olea europaea HOM05D007333 ORTHO05D008874 4.2e-13 78.6 137 36.5
Sp5g10030 Schrenkiella parvula HOM05D007333 ORTHO05D008874 5.5e-13 78.2 104 43.3
Sopen11g003540 Solanum pennellii HOM05D007333 ORTHO05D008874 5.5e-13 78.2 146 34.2
MSTRG.408 Avicennia marina HOM05D007333 ORTHO05D008874 7.2e-13 77.8 137 38.0
Lsat_1_v5_gn_2_102881 Lactuca sativa HOM05D007333 ORTHO05D008874 7.2e-13 77.8 129 36.4
TPR.G2540 Trifolium pratense HOM05D007333 ORTHO05D008874 1.2e-12 77.0 141 36.9
SGA_v2.0_scaffold62G21322 Striga asiatica HOM05D007333 ORTHO05D008874 1.6e-12 76.6 112 39.3
Oeu030485.1 Olea europaea HOM05D007333 ORTHO05D008874 2.1e-12 76.3 119 39.5
PGSC0003DMG402027350 Solanum tuberosum HOM05D007333 ORTHO05D008874 3.6e-12 75.5 121 33.1
BolC8t50364H Brassica oleracea HOM05D007333 ORTHO05D008874 4.7e-12 75.1 131 36.6
TAR633G0429 Trochodendron aralioides HOM05D007333 ORTHO05D008874 7.9e-12 74.3 110 39.1
QL04p040607 Quercus lobata HOM05D007333 ORTHO05D008874 1.4e-11 73.6 104 43.3
BcaC07g39593 Brassica carinata HOM05D007333 ORTHO05D008874 2.3e-11 72.8 104 39.4
SalBow6G6510 Salvia bowleyana HOM05D007333 ORTHO05D008874 2.3e-11 72.8 101 43.6
C08p27470 Brassica napus HOM05D007333 ORTHO05D008874 5.1e-11 71.6 104 39.4
FvH4_7g06450 Fragaria vesca HOM05D007333 ORTHO05D008874 5.1e-11 71.6 104 39.4
BraA09t39992Z Brassica rapa HOM05D007333 ORTHO05D008874 1.1e-10 70.5 126 38.1
Medtr1g492600 Medicago truncatula HOM05D007333 ORTHO05D008874 1.1e-10 70.5 87 46.0
A09p45290 Brassica napus HOM05D007333 ORTHO05D008874 1.5e-10 70.1 125 36.8
MBI17_g20230_MAGBIO Magnolia biondii HOM05D007333 ORTHO05D008874 1.5e-10 70.1 72 48.6
unitig_746.g26629 Utricularia gibba HOM05D007333 ORTHO05D008874 2.0e-10 69.7 129 33.3
HanXRQChr14g0456271 Helianthus annuus HOM05D007333 ORTHO05D008874 3.3e-10 68.9 127 35.4
Medtr1g492630 Medicago truncatula HOM05D007333 ORTHO05D008874 4.4e-10 68.6 86 45.3
VMungo0720G1448 Vigna mungo HOM05D007333 ORTHO05D008874 1.3e-09 67.0 128 32.8
AT3G52230 Arabidopsis thaliana HOM05D007333 ORTHO05D008874 2.2e-09 66.2 95 40.0
CARHR162000 Cardamine hirsuta HOM05D007333 ORTHO05D008874 3.7e-09 65.5 121 33.9
Ah.04g164690 Amaranthus hybridus HOM05D034697 ORTHO05D008874 4.8e-09 65.1 131 35.1
Thecc.10G097400 Theobroma cacao HOM05D018442 ORTHO05D020347 6.3e-09 64.7 103 35.9
Thhalv10010807m.g Eutrema salsugineum HOM05D007333 ORTHO05D008874 8.2e-09 64.3 89 40.4
Aqoxy2G01500 Aquilegia oxysepala HOM05D007333 ORTHO05D008874 1.1e-08 63.9 140 31.4
ECA238G3189 Erigeron canadensis HOM05D007333 ORTHO05D008874 5.3e-08 61.6 138 29.7
A04p07130 Brassica napus HOM05D007333 ORTHO05D008874 1.5e-07 60.1 33 72.7
Nn2g13958 Nelumbo nucifera HOM05D007333 ORTHO05D008874 1.5e-07 60.1 46 58.7
Sed0004459 Sechium edule HOM05D027254 ORTHO05D028888 1.5e-07 60.1 60 40.0
Psat6g175280 Pisum sativum HOM05D007333 ORTHO05D008874 3.4e-07 58.9 79 39.2
MELO3C012374.2 Cucumis melo HOM05D027254 ORTHO05D028888 4.5e-07 58.5 54 42.6
PSO339G5821 Papaver somniferum HOM05D007333 ORTHO05D008874 1.0e-06 57.4 77 41.6
SEGI_06473 Sequoiadendron giganteum HOM05D007333 ORTHO05D008874 1.0e-06 57.4 68 39.7
Nn6g35090 Nelumbo nucifera HOM05D007333 ORTHO05D008874 1.3e-06 57.0 47 53.2
CSS0002382 Camellia sinensis var. sinensis HOM05D007333 ORTHO05D008874 2.2e-06 56.2 102 30.4
CsaV3_5G035720 Cucumis sativus L. HOM05D027254 ORTHO05D028888 2.2e-06 56.2 65 36.9
EL10Ac4g08229 Beta vulgaris HOM05D034697 ORTHO05D008874 2.9e-06 55.8 128 32.0
QL08p037183 Quercus lobata HOM05D018442 ORTHO05D020347 2.9e-06 55.8 94 39.4
HPP92_009761 Vanilla planifolia HOM05D065211 ORTHO05D008874 5.0e-06 55.1 74 40.5


User provided reference genes

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