Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 1.8e-78 295.8 148 100.0
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 7.2e-51 204.1 148 73.0
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 7.2e-51 204.1 148 71.6
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 7.2e-51 204.1 149 71.1
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 9.4e-51 203.8 149 71.8
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 4.7e-50 201.4 148 69.6
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 6.1e-50 201.1 148 68.9
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 6.1e-50 201.1 148 68.9
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 8.0e-50 200.7 148 68.9
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 2.3e-49 199.1 148 69.6
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 5.7e-48 194.5 149 69.1
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 9.8e-48 193.7 171 63.7
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.8e-46 189.5 150 66.0
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 3.1e-46 188.7 149 69.1
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 5.4e-46 188.0 150 66.7
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 1.6e-45 186.4 150 66.7
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 2.0e-45 186.0 149 66.4
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 1.0e-44 183.7 147 68.7
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 8.6e-44 180.6 149 64.4
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 2.8e-42 175.6 148 60.8
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 3.6e-42 175.3 155 61.3
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 1.0e-41 173.7 148 62.8
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 5.2e-41 171.4 155 60.0
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 8.9e-41 170.6 148 62.8
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 8.9e-41 170.6 148 61.5
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 1.2e-40 170.2 149 65.8
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 1.2e-40 170.2 150 62.7
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 2.0e-40 169.5 150 60.7
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 2.0e-40 169.5 149 63.1
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 2.0e-40 169.5 148 62.2
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 2.6e-40 169.1 147 66.0
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 4.4e-40 168.3 150 62.0
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 4.4e-40 168.3 149 62.4
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 4.4e-40 168.3 149 62.4
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 5.7e-40 167.9 148 63.5
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 7.5e-40 167.5 149 61.1
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 1.7e-39 166.4 148 60.8
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.7e-39 166.4 126 65.1
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 4.9e-39 164.9 146 58.2
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 6.3e-39 164.5 153 60.8
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 8.3e-39 164.1 141 61.0
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 1.4e-38 163.3 149 59.7
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 2.4e-38 162.5 160 57.5
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 3.1e-38 162.2 155 57.4
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 7.0e-38 161.0 149 59.1
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 7.0e-38 161.0 149 59.1
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 7.0e-38 161.0 149 61.7
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 1.6e-37 159.8 148 57.4
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 3.5e-37 158.7 146 58.9
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 5.9e-37 157.9 150 58.7
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 7.8e-37 157.5 150 58.7
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 7.8e-37 157.5 148 60.8
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 7.8e-37 157.5 148 62.8
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 1.3e-36 156.8 150 58.7
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 1.3e-36 156.8 153 58.2
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 1.7e-36 156.4 154 58.4
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 2.3e-36 156.0 150 57.3
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 2.3e-36 156.0 149 60.4
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 2.9e-36 155.6 150 58.0
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 3.8e-36 155.2 153 58.8
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 3.8e-36 155.2 148 60.8
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 6.6e-36 154.5 150 58.7
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 6.6e-36 154.5 154 58.4
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 1.1e-35 153.7 149 59.1
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 1.9e-35 152.9 151 52.3
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 2.5e-35 152.5 153 56.2
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 2.5e-35 152.5 148 59.5
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 5.6e-35 151.4 149 57.7
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 5.6e-35 151.4 152 57.2
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 9.5e-35 150.6 151 57.6
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 9.5e-35 150.6 149 58.4
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 9.5e-35 150.6 150 59.3
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 1.2e-34 150.2 150 59.3
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 2.8e-34 149.1 153 53.6
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 3.6e-34 148.7 151 58.3
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 6.1e-34 147.9 151 60.9
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 8.0e-34 147.5 147 57.1
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 1.0e-33 147.1 163 55.2
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.4e-33 146.7 149 55.0
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 1.4e-33 146.7 160 55.6
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 4.0e-33 145.2 149 57.7
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 1.5e-32 143.3 141 58.9
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 2.0e-32 142.9 145 51.0
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 4.4e-32 141.7 160 55.6
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 5.8e-32 141.4 149 54.4
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 9.8e-32 140.6 152 55.3
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 1.7e-31 139.8 144 53.5
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 2.2e-31 139.4 158 54.4
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 2.9e-31 139.0 170 50.0
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 6.4e-31 137.9 171 49.1
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 2.4e-30 136.0 124 56.5
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 1.2e-29 133.7 90 73.3
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 3.5e-29 132.1 124 55.6
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 6.0e-29 131.3 164 53.7
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 1.3e-28 130.2 103 68.0
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 1.3e-28 130.2 130 50.8
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 5.0e-28 128.3 103 67.0
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 1.6e-26 123.2 155 47.1
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 2.1e-26 122.9 148 52.7
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 6.2e-26 121.3 122 55.7
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 2.9e-23 112.5 93 60.2
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 6.4e-23 111.3 136 48.5
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 6.4e-23 111.3 150 46.7
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 1.1e-22 110.5 152 44.1
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 1.9e-22 109.8 124 49.2
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 2.4e-22 109.4 92 58.7
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 7.0e-22 107.8 126 50.8
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 2.5e-19 99.4 180 40.6
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 5.6e-19 98.2 75 66.7
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 1.6e-18 96.7 125 46.4
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 2.8e-18 95.9 91 52.7
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 1.4e-17 93.6 118 46.6
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 4.0e-17 92.0 149 46.3
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 5.2e-17 91.7 91 51.6
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 2.2e-15 86.3 126 39.7
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 1.1e-14 84.0 97 46.4
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 3.5e-13 79.0 131 38.9
Sed0004594 Sechium edule HOM05D006233 ORTHO05D007247 1.3e-12 77.0 90 45.6
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 1.1e-11 73.9 77 54.5
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 1.9e-11 73.2 92 40.2
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 4.3e-11 72.0 61 59.0
SalBow7G1471 Salvia bowleyana HOM05D006233 ORTHO05D007247 4.0e-09 65.5 106 41.5
FAN25G2302 Fragaria x ananassa HOM05D000283 ORTHO05D000358 2.0e-08 63.2 68 50.0
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 2.0e-08 63.2 50 66.0
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 4.4e-08 62.0 48 64.6
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 5.8e-08 61.6 53 58.5
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 1.7e-07 60.1 58 53.4
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 8.4e-07 57.8 42 66.7


User provided reference genes

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