Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 2.9e-63 245.0 116 100.0
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 9.7e-27 123.6 93 60.2
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 5.9e-24 114.4 72 69.4
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 2.9e-23 112.1 94 59.6
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 1.1e-22 110.2 92 57.6
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 1.5e-22 109.8 56 75.0
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 9.4e-22 107.1 78 62.8
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 2.7e-21 105.5 45 97.8
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 2.7e-21 105.5 84 58.3
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 1.0e-20 103.6 53 77.4
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 1.4e-20 103.2 53 73.6
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 1.8e-20 102.8 75 62.7
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 1.8e-20 102.8 79 63.3
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 1.8e-20 102.8 58 72.4
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 2.3e-20 102.4 91 56.0
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 3.0e-20 102.1 72 61.1
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 3.0e-20 102.1 91 53.8
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 4.0e-20 101.7 96 49.0
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 5.2e-20 101.3 100 53.0
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 5.2e-20 101.3 53 75.5
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 6.8e-20 100.9 61 65.6
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 6.8e-20 100.9 60 71.7
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 8.8e-20 100.5 75 62.7
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 8.8e-20 100.5 92 48.9
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 1.2e-19 100.1 72 61.1
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 1.2e-19 100.1 64 62.5
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 1.5e-19 99.8 71 62.0
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 2.0e-19 99.4 102 49.0
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 2.0e-19 99.4 68 61.8
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 2.0e-19 99.4 103 51.5
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 2.0e-19 99.4 92 53.3
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 2.6e-19 99.0 66 63.6
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 3.4e-19 98.6 75 56.0
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 4.4e-19 98.2 106 52.8
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 4.4e-19 98.2 84 56.0
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 4.4e-19 98.2 100 51.0
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 4.4e-19 98.2 81 56.8
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 5.7e-19 97.8 91 57.1
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 5.7e-19 97.8 93 50.5
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 1.3e-18 96.7 51 76.5
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 1.3e-18 96.7 64 62.5
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 1.3e-18 96.7 55 72.7
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 2.2e-18 95.9 51 76.5
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 2.8e-18 95.5 68 60.3
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 2.8e-18 95.5 82 53.7
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 2.8e-18 95.5 54 74.1
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 3.7e-18 95.1 54 75.9
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 4.8e-18 94.7 86 53.5
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 4.8e-18 94.7 96 47.9
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 4.8e-18 94.7 63 66.7
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 6.3e-18 94.4 60 66.7
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 6.3e-18 94.4 60 66.7
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 6.3e-18 94.4 119 42.9
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 1.4e-17 93.2 45 84.4
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 1.8e-17 92.8 65 63.1
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 1.8e-17 92.8 55 70.9
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 2.4e-17 92.4 55 69.1
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 7.0e-17 90.9 66 62.1
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 9.1e-17 90.5 67 62.7
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 9.1e-17 90.5 92 45.7
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 2.0e-16 89.4 65 61.5
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 2.7e-16 89.0 95 48.4
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 2.7e-16 89.0 82 48.8
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 1.7e-15 86.3 89 50.6
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 2.2e-15 85.9 44 79.5
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 2.2e-15 85.9 52 67.3
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 2.9e-15 85.5 76 57.9
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 3.8e-15 85.1 39 79.5
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 5.0e-15 84.7 66 54.5
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.5e-14 82.4 75 53.3
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 2.5e-14 82.4 63 55.6
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 2.1e-13 79.3 49 65.3
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 2.1e-13 79.3 43 69.8
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 2.7e-13 79.0 50 62.0
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 6.1e-13 77.8 84 46.4
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 4.0e-12 75.1 53 67.9
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 4.0e-12 75.1 92 44.6
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 1.5e-11 73.2 43 62.8
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 2.0e-11 72.8 40 65.0
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 9.8e-11 70.5 102 39.2
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 3.7e-10 68.6 59 50.8
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 1.4e-09 66.6 71 45.1
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 3.1e-09 65.5 41 61.0
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 2.0e-08 62.8 36 69.4
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 2.0e-08 62.8 62 45.2
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 4.5e-08 61.6 50 52.0
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 2.3e-07 59.3 55 47.3


User provided reference genes

Program Settings