Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1799 Cannabis sativa HOM05D008345 ORTHO05D010179 3.9e-46 188.7 184 100.0
Potri.003G064900 Populus trichocarpa HOM05D008345 ORTHO05D010179 1.1e-13 80.9 46 80.4
FvH4_6g34720 Fragaria vesca HOM05D008345 ORTHO05D010179 1.5e-13 80.5 60 68.3
Prupe.3G041900 Prunus persica HOM05D008345 ORTHO05D010179 2.6e-13 79.7 47 87.2
Ciclev10026572m.g Citrus clementina HOM05D008345 ORTHO05D010179 4.4e-13 79.0 65 61.5
Thecc.06G120000 Theobroma cacao HOM05D008345 ORTHO05D010179 7.4e-13 78.2 62 71.0
Ca_23374_v3 Cicer arietinum L. HOM05D008345 ORTHO05D010179 9.7e-13 77.8 47 74.5
Glyma.07G038300 Glycine max HOM05D008345 ORTHO05D010179 9.7e-13 77.8 47 76.6
Sabra03G0038200 Salix brachista HOM05D008345 ORTHO05D010179 1.7e-12 77.0 46 76.1
RcHm_v2.0_Chr2g0145371 Rosa chinensis HOM05D008345 ORTHO05D010179 2.8e-12 76.3 44 84.1
Glyma.16G007500 Glycine max HOM05D008345 ORTHO05D010179 4.8e-12 75.5 47 74.5
COL.COLO4_30757 Corchorus olitorius HOM05D008345 ORTHO05D010179 1.1e-11 74.3 46 78.3
TWI79G1189 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 1.4e-11 73.9 47 72.3
Lj3g0003445 Lotus japonicus HOM05D008345 ORTHO05D010179 2.4e-11 73.2 47 72.3
Lj4g0027375 Lotus japonicus HOM05D008345 ORTHO05D010179 2.4e-11 73.2 47 72.3
Phvul.010G130100 Phaseolus vulgaris HOM05D008345 ORTHO05D010179 2.4e-11 73.2 68 66.2
Medtr8g020530 Medicago truncatula HOM05D008345 ORTHO05D010179 4.1e-11 72.4 62 59.7
FAN02G4084 Fragaria x ananassa HOM05D008345 ORTHO05D010179 5.3e-11 72.0 56 73.2
FAN05G3870 Fragaria x ananassa HOM05D008345 ORTHO05D010179 5.3e-11 72.0 56 73.2
FAN14G1116 Fragaria x ananassa HOM05D008345 ORTHO05D010179 5.3e-11 72.0 56 66.1
FAN09G3851 Fragaria x ananassa HOM05D008345 ORTHO05D010179 7.0e-11 71.6 56 64.3
Gohir.D05G142400 Gossypium hirsutum HOM05D008345 ORTHO05D010179 1.6e-10 70.5 46 73.9
Duzib192G0347 Durio zibethinus HOM05D008345 ORTHO05D010179 2.0e-10 70.1 48 66.7
Manes.04G144600 Manihot esculenta HOM05D008345 ORTHO05D010179 2.0e-10 70.1 48 66.7
Atru.chr1.3940 Acer truncatum HOM05D008345 ORTHO05D010179 3.5e-10 69.3 74 51.4
Gohir.A05G140100 Gossypium hirsutum HOM05D008345 ORTHO05D010179 4.5e-10 68.9 46 71.7
Gorai.009G146400 Gossypium raimondii HOM05D008345 ORTHO05D010179 4.5e-10 68.9 46 71.7
Duzib235G0194 Durio zibethinus HOM05D008345 ORTHO05D010179 5.9e-10 68.6 48 66.7
Lalb_Chr04g0263511 Lupinus albus HOM05D008345 ORTHO05D010179 5.9e-10 68.6 43 74.4
Cpa.g.sc25.117 Carica papaya HOM05D008345 ORTHO05D010179 1.0e-09 67.8 42 78.6
Cfa003533 Carpinus fangiana HOM05D008345 ORTHO05D010179 1.3e-09 67.4 40 80.0
Sabra01G0141900 Salix brachista HOM05D008345 ORTHO05D010179 2.2e-09 66.6 45 68.9
TPR.G32503 Trifolium pratense HOM05D008345 ORTHO05D010179 2.2e-09 66.6 49 67.3
MELO3C025805.2 Cucumis melo HOM05D008345 ORTHO05D010179 2.9e-09 66.2 48 66.7
CsaV3_3G031340 Cucumis sativus L. HOM05D008345 ORTHO05D010179 2.9e-09 66.2 48 66.7
CiPaw.01G218600 Carya illinoinensis HOM05D008345 ORTHO05D010179 3.8e-09 65.9 45 75.6
ClCG07G014060 Citrullus lanatus HOM05D008345 ORTHO05D010179 3.8e-09 65.9 48 66.7
VMungo0331G1836 Vigna mungo HOM05D008345 ORTHO05D010179 3.8e-09 65.9 47 68.1
PGR119G1016 Punica granatum HOM05D008345 ORTHO05D010179 6.5e-09 65.1 48 60.4
TWI31G0115 Tripterygium wilfordii HOM05D008345 ORTHO05D010179 1.1e-08 64.3 41 73.2
Duzib160G0403 Durio zibethinus HOM05D008345 ORTHO05D010179 1.5e-08 63.9 48 64.6
Nn6g35611 Nelumbo nucifera HOM05D008345 ORTHO05D010179 5.5e-08 62.0 46 63.0
Lalb_Chr01g0013621 Lupinus albus HOM05D008345 ORTHO05D010179 7.2e-08 61.6 43 69.8
DCAR_022695 Daucus carota HOM05D011544 ORTHO05D010179 2.1e-07 60.1 53 54.7
CiPaw.02G135800 Carya illinoinensis HOM05D008345 ORTHO05D010179 2.7e-07 59.7 39 79.5
QL05p007306 Quercus lobata HOM05D008345 ORTHO05D010179 2.7e-07 59.7 62 51.6
EL10Ac7g16409 Beta vulgaris HOM05D008345 ORTHO05D010179 4.7e-07 58.9 36 80.6
Hma1.2p1_0291F.1_g115100 Hydrangea macrophylla HOM05D008345 ORTHO05D010179 4.7e-07 58.9 39 69.2
ATR0598G240 Amborella trichopoda HOM05D008345 ORTHO05D010179 6.1e-07 58.5 49 51.0
Sed0012336 Sechium edule HOM05D008345 ORTHO05D010179 6.1e-07 58.5 45 62.2
Aa31LG4G2900 Aethionema arabicum HOM05D013126 ORTHO05D015256 1.0e-06 57.8 42 61.9
Nn8g38674 Nelumbo nucifera HOM05D042106 ORTHO05D010179 1.0e-06 57.8 44 54.5
Actinidia21788 Actinidia chinensis HOM05D008345 ORTHO05D010179 2.3e-06 56.6 42 59.5
AT1G72600 Arabidopsis thaliana HOM05D013126 ORTHO05D015256 2.3e-06 56.6 42 61.9
THA.LOC104810363 Tarenaya hassleriana HOM05D009071 ORTHO05D011247 2.3e-06 56.6 41 58.5
AL3G48140 Arabidopsis lyrata HOM05D013126 ORTHO05D015256 4.0e-06 55.8 42 61.9
Sopen03g041200 Solanum pennellii HOM05D011544 ORTHO05D010179 5.2e-06 55.5 55 49.1


User provided reference genes

Program Settings