Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 7.1e-71 270.4 128 100.0
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 6.0e-54 214.2 106 96.2
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 1.8e-53 212.6 106 95.3
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 1.5e-52 209.5 106 95.3
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.5e-49 199.5 110 82.7
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.3e-48 196.4 115 78.3
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 2.9e-48 195.3 106 82.1
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 2.5e-47 192.2 105 82.9
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 7.1e-47 190.7 123 74.0
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 2.7e-46 188.7 105 81.9
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 3.5e-46 188.3 106 81.1
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 7.9e-46 187.2 106 80.2
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.0e-45 186.8 101 83.2
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.0e-45 186.8 101 83.2
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 1.0e-45 186.8 106 80.2
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 1.3e-45 186.4 104 79.8
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 2.3e-45 185.7 105 80.0
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 2.3e-45 185.7 105 81.0
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 3.0e-45 185.3 116 72.4
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 3.9e-45 184.9 105 81.0
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 5.1e-45 184.5 103 83.5
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 5.1e-45 184.5 106 79.2
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 8.7e-45 183.7 105 78.1
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 1.1e-44 183.3 105 79.0
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 1.5e-44 183.0 105 81.0
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 1.5e-44 183.0 101 84.2
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 1.9e-44 182.6 106 78.3
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 1.9e-44 182.6 105 79.0
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 3.3e-44 181.8 105 80.0
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 3.3e-44 181.8 105 79.0
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 3.3e-44 181.8 113 72.6
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 4.3e-44 181.4 105 79.0
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 7.4e-44 180.6 106 77.4
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 7.4e-44 180.6 105 78.1
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 7.4e-44 180.6 105 78.1
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 7.4e-44 180.6 106 77.4
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 7.4e-44 180.6 105 80.0
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 7.4e-44 180.6 105 80.0
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 9.7e-44 180.3 105 79.0
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 9.7e-44 180.3 105 79.0
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 1.3e-43 179.9 105 77.1
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 1.3e-43 179.9 107 77.6
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 1.3e-43 179.9 105 79.0
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 2.2e-43 179.1 106 77.4
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.2e-43 179.1 101 82.2
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 2.2e-43 179.1 105 79.0
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 2.8e-43 178.7 101 82.2
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 3.7e-43 178.3 107 78.5
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 4.8e-43 177.9 105 77.1
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 4.8e-43 177.9 106 76.4
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 1.1e-42 176.8 111 75.7
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 1.1e-42 176.8 105 76.2
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 1.1e-42 176.8 105 77.1
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 1.4e-42 176.4 95 83.2
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 1.8e-42 176.0 106 74.5
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 2.4e-42 175.6 101 81.2
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 3.1e-42 175.3 106 76.4
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 3.1e-42 175.3 106 76.4
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 4.1e-42 174.9 106 75.5
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 6.9e-42 174.1 95 83.2
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 6.9e-42 174.1 105 77.1
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 9.0e-42 173.7 101 80.2
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 1.2e-41 173.3 106 74.5
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 1.5e-41 172.9 105 74.3
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 2.6e-41 172.2 106 74.5
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 3.4e-41 171.8 106 73.6
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 3.4e-41 171.8 106 77.4
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 4.5e-41 171.4 112 73.2
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 5.9e-41 171.0 105 74.3
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 1.0e-40 170.2 108 69.4
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 1.3e-40 169.9 106 73.6
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 2.9e-40 168.7 105 75.2
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 2.9e-40 168.7 123 65.0
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 3.8e-40 168.3 123 66.7
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 3.8e-40 168.3 105 73.3
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 8.5e-40 167.2 105 72.4
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 1.1e-39 166.8 106 72.6
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 1.9e-39 166.0 105 71.4
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 2.5e-39 165.6 102 73.5
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 2.5e-39 165.6 105 75.2
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 3.2e-39 165.2 110 67.3
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 4.2e-39 164.9 110 66.4
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 1.6e-38 162.9 105 69.5
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 2.1e-38 162.5 110 66.4
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 2.1e-38 162.5 101 75.2
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 2.7e-38 162.2 105 69.5
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 2.7e-38 162.2 105 69.5
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 2.7e-38 162.2 123 63.4
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 2.7e-38 162.2 101 74.3
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 2.7e-38 162.2 101 74.3
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 2.7e-38 162.2 116 66.4
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 6.1e-38 161.0 105 67.6
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 6.1e-38 161.0 110 65.5
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 3.9e-37 158.3 105 67.6
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 3.9e-37 158.3 105 65.7
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 5.7e-36 154.5 106 67.9
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 5.7e-36 154.5 105 63.8
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 7.4e-36 154.1 80 87.5
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 7.4e-36 154.1 80 87.5
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 9.7e-36 153.7 87 81.6
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 1.3e-35 153.3 101 71.3
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 2.2e-35 152.5 80 85.0
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 3.7e-35 151.8 105 61.9
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 6.3e-35 151.0 80 83.8
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 1.4e-34 149.8 101 63.4
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 1.4e-34 149.8 101 63.4
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 2.4e-34 149.1 101 64.4
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 2.4e-34 149.1 101 64.4
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 4.1e-34 148.3 108 68.5
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 2.9e-32 142.1 74 86.5
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 8.5e-32 140.6 80 81.2
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 2.5e-31 139.0 112 62.5
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 9.4e-31 137.1 105 61.9
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 2.7e-30 135.6 71 84.5
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 3.7e-27 125.2 123 47.2
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 3.7e-27 125.2 108 56.5
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 1.4e-26 123.2 105 53.3
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 1.5e-25 119.8 84 67.9
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 4.5e-25 118.2 105 48.6
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 7.7e-25 117.5 80 67.5
BraA02t06308Z Brassica rapa HOM05D005379 ORTHO05D006661 6.5e-24 114.4 80 65.0
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 1.1e-23 113.6 105 47.6
BcaC03g14620 Brassica carinata HOM05D005379 ORTHO05D006661 3.6e-22 108.6 81 58.0
BolC2t08192H Brassica oleracea HOM05D005379 ORTHO05D006661 1.4e-18 96.7 70 61.4
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 1.0e-16 90.5 91 41.8
Lalb_Chr16g0382801 Lupinus albus HOM05D005379 ORTHO05D006661 5.0e-16 88.2 54 70.4
SEGI_00850 Sequoiadendron giganteum HOM05D005379 ORTHO05D006661 9.8e-12 73.9 47 72.3
MCO01G548 Micromonas commoda HOM05D005379 ORTHO05D006661 4.8e-11 71.6 89 36.0
HPP92_009967 Vanilla planifolia HOM05D005379 ORTHO05D006661 8.3e-11 70.9 51 60.8
Ah.13g066320 Amaranthus hybridus HOM05D005379 ORTHO05D006661 5.4e-10 68.2 104 39.4
HPP92_009968 Vanilla planifolia HOM05D005379 ORTHO05D006661 9.1e-10 67.4 40 75.0
Cre01.g052050 Chlamydomonas reinhardtii HOM05D005379 ORTHO05D006661 2.5e-07 59.3 94 35.1
C02p20560 Brassica napus HOM05D005379 ORTHO05D006661 4.2e-07 58.5 52 50.0


User provided reference genes

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