Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 1.1e-70 270.4 161 100.0
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 2.7e-24 116.3 82 67.1
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 3.5e-24 115.9 81 69.1
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 4.5e-24 115.5 86 62.8
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 7.8e-24 114.8 90 61.1
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 1.0e-23 114.4 86 62.8
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.0e-23 114.4 86 62.8
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 1.0e-23 114.4 91 59.3
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 1.7e-23 113.6 80 68.8
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 3.8e-23 112.5 90 58.9
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 5.0e-23 112.1 64 75.0
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 5.0e-23 112.1 83 66.3
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 6.6e-23 111.7 155 45.8
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 6.6e-23 111.7 86 61.6
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 8.6e-23 111.3 86 61.6
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 3.3e-22 109.4 90 55.6
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 4.3e-22 109.0 85 63.5
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 4.3e-22 109.0 90 56.7
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 5.6e-22 108.6 88 56.8
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 5.6e-22 108.6 88 56.8
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 7.3e-22 108.2 82 64.6
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 9.5e-22 107.8 88 55.7
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 9.5e-22 107.8 85 62.4
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 9.5e-22 107.8 83 65.1
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 9.5e-22 107.8 153 45.8
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.2e-21 107.5 88 55.7
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 1.6e-21 107.1 90 56.7
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 1.6e-21 107.1 88 54.5
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 2.1e-21 106.7 90 56.7
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 2.1e-21 106.7 88 56.8
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 2.8e-21 106.3 88 56.8
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 2.8e-21 106.3 64 75.0
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 3.6e-21 105.9 82 59.8
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 4.7e-21 105.5 90 57.8
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 4.7e-21 105.5 61 73.8
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 4.7e-21 105.5 83 62.7
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 6.1e-21 105.1 83 62.7
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 8.0e-21 104.8 86 60.5
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 8.0e-21 104.8 83 60.2
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 1.0e-20 104.4 88 55.7
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 1.0e-20 104.4 88 55.7
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 1.0e-20 104.4 88 55.7
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 1.4e-20 104.0 67 70.1
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 1.8e-20 103.6 85 60.0
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 2.3e-20 103.2 82 59.8
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.3e-20 103.2 83 63.9
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 3.0e-20 102.8 86 60.5
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 5.2e-20 102.1 152 43.4
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 5.2e-20 102.1 86 57.0
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 6.8e-20 101.7 67 70.1
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 8.9e-20 101.3 91 56.0
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.6e-19 99.8 91 54.9
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 2.6e-19 99.8 85 57.6
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 2.6e-19 99.8 90 54.4
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 2.6e-19 99.8 150 43.3
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.4e-19 99.4 91 54.9
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.4e-19 99.4 91 54.9
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.4e-19 99.4 91 53.8
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.4e-19 99.4 91 54.9
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.4e-19 99.4 91 54.9
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 3.4e-19 99.4 83 55.4
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 4.4e-19 99.0 91 56.0
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 4.4e-19 99.0 86 58.1
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.8e-19 97.8 91 53.8
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.8e-19 97.8 91 53.8
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.8e-19 97.8 90 53.3
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 9.8e-19 97.8 91 53.8
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 1.7e-18 97.1 64 64.1
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 2.2e-18 96.7 157 41.4
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 2.9e-18 96.3 86 55.8
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 3.7e-18 95.9 92 55.4
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 4.9e-18 95.5 90 52.2
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 4.9e-18 95.5 82 58.5
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 4.9e-18 95.5 78 61.5
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 8.3e-18 94.7 83 59.0
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 1.8e-17 93.6 85 51.8
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 3.2e-17 92.8 86 52.3
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 4.1e-17 92.4 84 54.8
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 5.4e-17 92.0 157 39.5
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.2e-16 90.9 89 50.6
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 2.0e-16 90.1 76 56.6
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 4.6e-16 89.0 67 59.7
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 4.6e-16 89.0 79 55.7
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 5.9e-16 88.6 67 61.2
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 7.8e-16 88.2 83 55.4
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.0e-15 87.8 60 65.0
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 1.0e-15 87.8 93 49.5
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.3e-15 87.4 60 65.0
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 1.3e-15 87.4 63 61.9
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 1.7e-15 87.0 86 48.8
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 1.7e-15 87.0 56 60.7
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 1.7e-15 87.0 68 58.8
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 3.0e-15 86.3 83 48.2
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 5.0e-15 85.5 57 63.2
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 1.9e-14 83.6 67 56.7
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 4.7e-13 79.0 64 59.4
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.1e-12 77.8 72 52.8
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 1.4e-12 77.4 62 61.3
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 1.1e-09 67.8 53 54.7
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 1.1e-09 67.8 53 54.7
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 1.2e-08 64.3 52 48.1
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 4.6e-08 62.4 74 43.2
HPP92_020058 Vanilla planifolia HOM05D003240 ORTHO05D009426 1.3e-07 60.8 70 44.3
Aqoxy4G01492 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 1.5e-06 57.4 65 47.7
Aqoxy3G01943 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 3.3e-06 56.2 65 47.7
SalBow8G4319 Salvia bowleyana HOM05D002014 ORTHO05D001958 3.3e-06 56.2 67 49.3
Aqoxy1G03430 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 4.3e-06 55.8 65 47.7
Aqoxy3G01944 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 4.3e-06 55.8 65 47.7
Aqoxy4G01347 Aquilegia oxysepala HOM05D002014 ORTHO05D001958 4.3e-06 55.8 65 46.2
Gohir.A13G209200 Gossypium hirsutum HOM05D002014 ORTHO05D001958 5.6e-06 55.5 80 37.5
QL05p072432 Quercus lobata HOM05D002014 ORTHO05D001958 5.6e-06 55.5 69 42.0
QL05p072457 Quercus lobata HOM05D002014 ORTHO05D001958 5.6e-06 55.5 69 42.0
QL12p029974 Quercus lobata HOM05D002014 ORTHO05D001958 5.6e-06 55.5 69 42.0
Gorai.013G243900 Gossypium raimondii HOM05D002014 ORTHO05D001958 7.3e-06 55.1 80 36.2
CAN.G1014.30 Capsicum annuum HOM05D002014 ORTHO05D001958 9.5e-06 54.7 81 38.3
Solyc02g036240.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 9.5e-06 54.7 65 44.6


User provided reference genes

Program Settings