Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1720 Cannabis sativa HOM05D008230 ORTHO05D010279 3.7e-79 298.1 149 100.0
CANSAT56G2525 Cannabis sativa HOM05D008230 ORTHO05D010279 1.7e-63 246.1 150 86.0
Potri.002G144400 Populus trichocarpa HOM05D008230 ORTHO05D010279 2.8e-18 95.9 148 45.9
Thecc.01G382000 Theobroma cacao HOM05D008230 ORTHO05D010279 5.3e-17 91.7 149 47.7
Potri.014G060400 Populus trichocarpa HOM05D008230 ORTHO05D010279 2.6e-16 89.4 149 43.6
Sabra14G0044300 Salix brachista HOM05D008230 ORTHO05D010279 9.9e-16 87.4 149 40.9
Prupe.2G138500 Prunus persica HOM05D008230 ORTHO05D010279 3.8e-15 85.5 164 42.7
MD07G1116200 Malus domestica HOM05D008230 ORTHO05D010279 4.9e-15 85.1 166 42.8
Gohir.A08G136500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 6.4e-15 84.7 152 42.1
Sabra02G0112300 Salix brachista HOM05D008230 ORTHO05D010279 8.4e-15 84.3 148 41.9
arahy.Tifrunner.gnm1.ann1.MFP8ME Arachis hypogaea HOM05D008230 ORTHO05D010279 4.2e-14 82.0 154 40.3
COL.COLO4_12495 Corchorus olitorius HOM05D008230 ORTHO05D010279 4.2e-14 82.0 95 53.7
Manes.05G048600 Manihot esculenta HOM05D008230 ORTHO05D010279 4.2e-14 82.0 146 41.8
QL04p038908 Quercus lobata HOM05D008230 ORTHO05D010279 4.2e-14 82.0 150 44.7
Gohir.D08G157300 Gossypium hirsutum HOM05D008230 ORTHO05D010279 5.4e-14 81.6 152 40.8
Cpa.g.sc49.161 Carica papaya HOM05D008230 ORTHO05D010279 9.3e-14 80.9 156 42.3
Cfa011173 Carpinus fangiana HOM05D008230 ORTHO05D010279 3.5e-13 79.0 150 42.0
Gorai.004G163600 Gossypium raimondii HOM05D008230 ORTHO05D010279 3.5e-13 79.0 152 40.1
CiPaw.14G026100 Carya illinoinensis HOM05D008230 ORTHO05D010279 1.0e-12 77.4 151 43.0
Hma1.2p1_0041F.1_g025330 Hydrangea macrophylla HOM05D008230 ORTHO05D010279 1.0e-12 77.4 161 36.0
CiPaw.13G032900 Carya illinoinensis HOM05D008230 ORTHO05D010279 3.0e-12 75.9 146 40.4
FvH4_7g11140 Fragaria vesca HOM05D008230 ORTHO05D010279 1.1e-11 73.9 164 40.2
Dinv44123 Davidia involucrata HOM05D008230 ORTHO05D010279 1.5e-11 73.6 153 38.6
Haze_02676 Corylus avellana HOM05D008230 ORTHO05D010279 4.3e-11 72.0 150 41.3
Psat7g237760 Pisum sativum HOM05D008230 ORTHO05D010279 5.6e-11 71.6 140 39.3
Phvul.010G077800 Phaseolus vulgaris HOM05D008230 ORTHO05D010279 1.6e-10 70.1 151 36.4
FAN06G0210 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.8e-10 69.3 164 38.4
FAN03G0682 Fragaria x ananassa HOM05D008230 ORTHO05D010279 3.7e-10 68.9 166 37.3
Lalb_Chr03g0039781 Lupinus albus HOM05D008230 ORTHO05D010279 4.8e-10 68.6 149 36.9
Dinv43677 Davidia involucrata HOM05D008230 ORTHO05D010279 6.2e-10 68.2 142 38.0
Migut.B01599 Erythranthe guttata HOM05D008230 ORTHO05D010279 6.2e-10 68.2 34 85.3
FAN01G0499 Fragaria x ananassa HOM05D008230 ORTHO05D010279 6.2e-10 68.2 162 37.7
Gohir.D12G097250 Gossypium hirsutum HOM05D008230 ORTHO05D010279 6.2e-10 68.2 150 41.3
Dinv44126 Davidia involucrata HOM05D008230 ORTHO05D010279 8.1e-10 67.8 141 37.6
FAN03G1067 Fragaria x ananassa HOM05D008230 ORTHO05D010279 8.1e-10 67.8 166 37.3
Gorai.008G105900 Gossypium raimondii HOM05D008230 ORTHO05D010279 8.1e-10 67.8 150 38.7
Medtr4g026350 Medicago truncatula HOM05D008230 ORTHO05D010279 8.1e-10 67.8 147 37.4
FAN06G3296 Fragaria x ananassa HOM05D008230 ORTHO05D010279 1.1e-09 67.4 161 38.5
FAN10G0483 Fragaria x ananassa HOM05D008230 ORTHO05D010279 1.1e-09 67.4 161 38.5
FAN10G2770 Fragaria x ananassa HOM05D008230 ORTHO05D010279 1.1e-09 67.4 161 38.5
PGR004G0323 Punica granatum HOM05D008230 ORTHO05D010279 2.4e-09 66.2 35 82.9
Gohir.A12G094500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 3.1e-09 65.9 150 38.0
Oeu045805.1 Olea europaea HOM05D043472 ORTHO05D010279 3.1e-09 65.9 152 37.5
Oeu045807.1 Olea europaea HOM05D043472 ORTHO05D010279 3.1e-09 65.9 152 37.5
VMungo0331G0239 Vigna mungo HOM05D008230 ORTHO05D010279 5.3e-09 65.1 143 37.1
SGA_v2.0_scaffold153G36972 Striga asiatica HOM05D008230 ORTHO05D010279 6.9e-09 64.7 99 42.4
Glyma.01G136600 Glycine max HOM05D008230 ORTHO05D010279 2.0e-08 63.2 144 36.8
SalBow5G3157 Salvia bowleyana HOM05D008230 ORTHO05D010279 2.0e-08 63.2 45 62.2
TPR.G4997 Trifolium pratense HOM05D008230 ORTHO05D010279 2.0e-08 63.2 145 39.3
Glyma.03G031600 Glycine max HOM05D008230 ORTHO05D010279 5.8e-08 61.6 149 34.9
Lsat_1_v5_gn_7_9081 Lactuca sativa HOM05D008230 ORTHO05D010279 6.4e-07 58.2 160 33.8
Lalb_Chr12g0208001 Lupinus albus HOM05D008230 ORTHO05D010279 8.4e-07 57.8 156 35.3
Nitab4.5_0011278g0020 Nicotiana tabacum HOM05D016400 ORTHO05D020901 8.4e-07 57.8 102 38.2
Lj3g0026436 Lotus japonicus HOM05D008230 ORTHO05D010279 1.1e-06 57.4 149 34.2
Eucgr.D02490 Eucalyptus grandis HOM05D008230 ORTHO05D010279 1.4e-06 57.0 35 74.3
Actinidia12189 Actinidia chinensis HOM05D008230 ORTHO05D010279 2.4e-06 56.2 150 36.0
ECA236G5072 Erigeron canadensis HOM05D008230 ORTHO05D010279 2.4e-06 56.2 34 79.4
Nn1g01052 Nelumbo nucifera HOM05D008230 ORTHO05D010279 5.5e-06 55.1 148 33.8
Nitab4.5_0000859g0270 Nicotiana tabacum HOM05D016400 ORTHO05D020901 5.5e-06 55.1 100 41.0
Hma1.2p1_0432F.1_g151700 Hydrangea macrophylla HOM05D016610 ORTHO05D017811 9.3e-06 54.3 77 48.1
Sc23g0003760 Simmondsia chinensis HOM05D008230 ORTHO05D010279 9.3e-06 54.3 85 43.5


User provided reference genes

Program Settings