Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1634 Cannabis sativa HOM05D003971 ORTHO05D004762 1.1e-301 1039.3 562 100.0
Cfa018707 Carpinus fangiana HOM05D003971 ORTHO05D004762 5.7e-205 718.0 549 69.4
Ciclev10031176m.g Citrus clementina HOM05D003971 ORTHO05D004762 9.6e-205 717.2 551 69.3
Glyma.06G163900 Glycine max HOM05D003971 ORTHO05D004762 9.0e-203 710.7 563 66.4
MD06G1130900 Malus domestica HOM05D003971 ORTHO05D004762 1.7e-201 706.4 555 68.5
Prupe.5G142100 Prunus persica HOM05D003971 ORTHO05D004762 1.7e-201 706.4 553 68.9
MD14G1147500 Malus domestica HOM05D003971 ORTHO05D004762 1.1e-200 703.7 555 68.1
Phvul.009G161300 Phaseolus vulgaris HOM05D003971 ORTHO05D004762 2.5e-200 702.6 568 64.4
Cpa.g.sc13.168 Carica papaya HOM05D003971 ORTHO05D004762 7.1e-200 701.0 549 67.2
Duzib084G0567 Durio zibethinus HOM05D003971 ORTHO05D004762 7.1e-200 701.0 557 66.4
arahy.Tifrunner.gnm1.ann1.9UH1TF Arachis hypogaea HOM05D003971 ORTHO05D004762 1.8e-198 696.4 573 64.2
Thecc.03G140300 Theobroma cacao HOM05D003971 ORTHO05D004762 8.7e-198 694.1 543 67.6
FvH4_5g09480 Fragaria vesca HOM05D003971 ORTHO05D004762 1.1e-197 693.7 555 66.8
Atru.chr6.1916 Acer truncatum HOM05D003971 ORTHO05D004762 2.5e-197 692.6 545 67.3
TAR622G0096 Trochodendron aralioides HOM05D003971 ORTHO05D004762 1.6e-196 689.9 553 65.6
FAN18G1571 Fragaria x ananassa HOM05D003971 ORTHO05D004762 2.2e-196 689.5 555 66.5
Lj1g0015188 Lotus japonicus HOM05D003971 ORTHO05D004762 8.2e-196 687.6 554 65.9
GSVIVG01008647001 Vitis vinifera HOM05D003971 ORTHO05D004762 1.8e-195 686.4 553 65.8
FAN13G1049 Fragaria x ananassa HOM05D003971 ORTHO05D004762 3.1e-195 685.6 555 66.1
arahy.Tifrunner.gnm1.ann1.86AC6C Arachis hypogaea HOM05D003971 ORTHO05D004762 1.2e-194 683.7 593 61.9
Lalb_Chr11g0069181 Lupinus albus HOM05D003971 ORTHO05D004762 5.9e-194 681.4 562 65.5
CiPaw.11G001000 Carya illinoinensis HOM05D003971 ORTHO05D004762 3.8e-193 678.7 521 68.9
FAN04G0277 Fragaria x ananassa HOM05D003971 ORTHO05D004762 8.5e-193 677.6 562 65.1
Psat5g055040 Pisum sativum HOM05D003971 ORTHO05D004762 1.1e-192 677.2 570 63.7
CSS0040569 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 2.5e-192 676.0 565 64.2
RcHm_v2.0_Chr7g0188721 Rosa chinensis HOM05D003971 ORTHO05D004762 6.1e-191 671.4 537 66.5
Gohir.A03G056200 Gossypium hirsutum HOM05D003971 ORTHO05D004762 1.0e-190 670.6 545 64.0
MELO3C002386.2 Cucumis melo HOM05D003971 ORTHO05D004762 3.9e-190 668.7 570 64.0
CsaV3_1G009920 Cucumis sativus L. HOM05D003971 ORTHO05D004762 5.1e-190 668.3 568 63.6
Gohir.D03G110400 Gossypium hirsutum HOM05D003971 ORTHO05D004762 1.5e-189 666.8 545 64.2
Medtr3g098600 Medicago truncatula HOM05D003971 ORTHO05D004762 4.3e-189 665.2 550 64.5
Sed0008211 Sechium edule HOM05D003971 ORTHO05D004762 4.3e-189 665.2 567 63.0
Potri.012G108100 Populus trichocarpa HOM05D003971 ORTHO05D004762 9.7e-189 664.1 572 62.4
QL10p000509 Quercus lobata HOM05D003971 ORTHO05D004762 6.3e-188 661.4 634 58.5
Gorai.003G116700 Gossypium raimondii HOM05D003971 ORTHO05D004762 5.3e-187 658.3 536 64.0
TWI39G0398 Tripterygium wilfordii HOM05D003971 ORTHO05D004762 3.4e-186 655.6 548 64.1
Aqoxy1G00170 Aquilegia oxysepala HOM05D003971 ORTHO05D004762 5.5e-184 648.3 563 61.8
Actinidia18301 Actinidia chinensis HOM05D003971 ORTHO05D004762 9.4e-184 647.5 567 62.1
ClCG03G004040 Citrullus lanatus HOM05D003971 ORTHO05D004762 2.1e-183 646.4 583 62.1
Lsat_1_v5_gn_5_10121 Lactuca sativa HOM05D003971 ORTHO05D004762 2.1e-183 646.4 578 61.2
Migut.I00618 Erythranthe guttata HOM05D003971 ORTHO05D004762 4.7e-183 645.2 554 61.4
Nn4g22021 Nelumbo nucifera HOM05D003971 ORTHO05D004762 1.4e-182 643.7 553 62.7
Lj9C486T6 Lonicera japonica HOM05D003971 ORTHO05D004762 2.3e-182 642.9 565 62.1
Glyma.04G201300 Glycine max HOM05D003971 ORTHO05D004762 3.0e-182 642.5 563 61.5
PSO384G2792 Papaver somniferum HOM05D003971 ORTHO05D004762 3.0e-182 642.5 564 61.2
Solyc12g042200.2 Solanum lycopersicum HOM05D003971 ORTHO05D004762 8.8e-182 641.0 572 60.5
TWI23G0486 Tripterygium wilfordii HOM05D003971 ORTHO05D004762 8.8e-182 641.0 549 61.7
HanXRQChr05g0155401 Helianthus annuus HOM05D003971 ORTHO05D004762 2.0e-181 639.8 563 61.8
Sabra12G0079300 Salix brachista HOM05D003971 ORTHO05D004762 2.0e-181 639.8 588 60.9
Peaxi162Scf01168g00013 Petunia axillaris HOM05D003971 ORTHO05D004762 7.4e-181 637.9 575 60.2
PSO339G4968 Papaver somniferum HOM05D003971 ORTHO05D004762 2.2e-180 636.3 551 61.9
Sopen12g021240 Solanum pennellii HOM05D003971 ORTHO05D004762 2.2e-180 636.3 562 60.7
FAN08G0744 Fragaria x ananassa HOM05D003971 ORTHO05D004762 2.8e-180 636.0 582 60.1
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 4.1e-179 632.1 565 61.8
Cc04_g05880 Coffea canephora HOM05D003971 ORTHO05D004762 5.3e-179 631.7 554 60.8
MSTRG.22849 Avicennia marina HOM05D003971 ORTHO05D004762 3.5e-178 629.0 554 61.0
Nitab4.5_0002584g0020 Nicotiana tabacum HOM05D003971 ORTHO05D004762 1.3e-177 627.1 557 62.7
Gohir.D07G051000 Gossypium hirsutum HOM05D003971 ORTHO05D004762 1.1e-176 624.0 548 60.9
Gorai.001G054100 Gossypium raimondii HOM05D003971 ORTHO05D004762 1.1e-176 624.0 548 60.8
Nitab4.5_0008403g0010 Nicotiana tabacum HOM05D003971 ORTHO05D004762 4.2e-176 622.1 559 62.1
Gohir.A07G046700 Gossypium hirsutum HOM05D003971 ORTHO05D004762 6.1e-175 618.2 548 60.2
Haze_07098 Corylus avellana HOM05D003971 ORTHO05D004762 1.8e-174 616.7 632 57.1
Sabra15G0126400 Salix brachista HOM05D003971 ORTHO05D004762 1.5e-173 613.6 568 59.2
Ca_10878_v3 Cicer arietinum L. HOM05D003971 ORTHO05D004762 2.8e-172 609.4 425 72.2
Lj5C87G6 Lonicera japonica HOM05D003971 ORTHO05D004762 3.1e-171 605.9 532 68.0
Rhsim08G0197300 Rhododendron simsii HOM05D003971 ORTHO05D004762 2.6e-170 602.8 598 56.9
PGR083G2644 Punica granatum HOM05D003971 ORTHO05D004762 3.5e-170 602.4 543 59.1
Hund10040 Selenicereus undatus HOM05D003971 ORTHO05D004762 8.5e-169 597.8 565 56.8
Hund02509 Selenicereus undatus HOM05D003971 ORTHO05D004762 1.6e-167 593.6 559 56.9
AT5G50970 Arabidopsis thaliana HOM05D003971 ORTHO05D004762 6.8e-166 588.2 553 58.0
MBI07_g41261_MAGBIO Magnolia biondii HOM05D003971 ORTHO05D004762 2.0e-165 586.6 551 58.8
Manes.06G126801 Manihot esculenta HOM05D003971 ORTHO05D004762 2.0e-165 586.6 502 62.0
Sp6g13140 Schrenkiella parvula HOM05D003971 ORTHO05D004762 2.2e-164 583.2 556 57.9
vmacro19182 Vaccinium macrocarpon HOM05D003971 ORTHO05D004762 2.2e-164 583.2 560 57.5
Thhalv10013209m.g Eutrema salsugineum HOM05D003971 ORTHO05D004762 3.7e-164 582.4 552 57.8
AL8G25160 Arabidopsis lyrata HOM05D003971 ORTHO05D004762 3.1e-163 579.3 550 57.3
THA.LOC104825039 Tarenaya hassleriana HOM05D003971 ORTHO05D004762 5.4e-163 578.6 552 57.4
Sc22g0003380 Simmondsia chinensis HOM05D003971 ORTHO05D004762 1.6e-162 577.0 551 57.9
ClCG06G018370 Citrullus lanatus HOM05D003971 ORTHO05D004762 2.7e-162 576.2 555 57.3
DCAR_021401 Daucus carota HOM05D003971 ORTHO05D004762 1.0e-161 574.3 569 55.0
Carub.0008s1099 Capsella rubella HOM05D003971 ORTHO05D004762 2.9e-161 572.8 549 57.6
Eucgr.K00065 Eucalyptus grandis HOM05D003971 ORTHO05D004762 2.9e-161 572.8 557 56.4
BraA03t10933Z Brassica rapa HOM05D003971 ORTHO05D004762 3.8e-161 572.4 563 56.5
CARHR257220 Cardamine hirsuta HOM05D003971 ORTHO05D004762 1.9e-160 570.1 555 57.1
CsaV3_1G000070 Cucumis sativus L. HOM05D003971 ORTHO05D004762 1.9e-160 570.1 551 55.7
A03p16430 Brassica napus HOM05D003971 ORTHO05D004762 2.5e-160 569.7 554 60.5
C03p19320 Brassica napus HOM05D003971 ORTHO05D004762 5.5e-160 568.5 550 56.7
Sed0022051 Sechium edule HOM05D003971 ORTHO05D004762 5.5e-160 568.5 547 55.8
BolC3t14318H Brassica oleracea HOM05D003971 ORTHO05D004762 2.1e-159 566.6 559 56.0
Oeu046606.1 Olea europaea HOM05D003971 ORTHO05D004762 4.4e-157 558.9 509 59.5
Lj4g0027413 Lotus japonicus HOM05D003971 ORTHO05D004762 3.7e-156 555.8 563 56.1
VMungo0251G1950 Vigna mungo HOM05D000512 ORTHO05D000861 1.6e-154 550.4 553 55.9
PGSC0003DMG400014242 Solanum tuberosum HOM05D003971 ORTHO05D004762 1.3e-153 547.4 561 53.5
EL10Ac5g11286 Beta vulgaris HOM05D003971 ORTHO05D004762 2.3e-153 546.6 570 53.5
AUR62041703 Chenopodium quinoa HOM05D003971 ORTHO05D004762 2.3e-153 546.6 472 59.3
AUR62041701 Chenopodium quinoa HOM05D003971 ORTHO05D004762 5.0e-153 545.4 357 71.4
Sopen03g037130 Solanum pennellii HOM05D003971 ORTHO05D004762 1.5e-152 543.9 559 53.3
AUR62009537 Chenopodium quinoa HOM05D003971 ORTHO05D004762 1.9e-152 543.5 587 52.1
Lsat_1_v5_gn_4_84501 Lactuca sativa HOM05D003971 ORTHO05D004762 7.2e-152 541.6 568 52.8
Phvul.002G281600 Phaseolus vulgaris HOM05D003971 ORTHO05D004762 2.0e-149 533.5 555 54.2
DCAR_016341 Daucus carota HOM05D003971 ORTHO05D004762 2.9e-148 529.6 532 54.1
MELO3C026159.2 Cucumis melo HOM05D003971 ORTHO05D004762 1.1e-147 527.7 393 65.6
BcaC01g06062 Brassica carinata HOM05D003971 ORTHO05D004762 2.4e-147 526.6 550 54.0
TPR.G25960 Trifolium pratense HOM05D003971 ORTHO05D004762 1.0e-145 521.2 572 54.4
Peaxi162Scf00314g00638 Petunia axillaris HOM05D003971 ORTHO05D004762 1.2e-143 514.2 558 51.4
Medtr8g100180 Medicago truncatula HOM05D003971 ORTHO05D004762 2.1e-143 513.5 556 51.6
MBI03_g13042_MAGBIO Magnolia biondii HOM05D003971 ORTHO05D004762 3.1e-142 509.6 362 68.5
VMungo1309G0830 Vigna mungo HOM05D003971 ORTHO05D004762 2.2e-140 503.4 298 78.5
ATR0582G269 Amborella trichopoda HOM05D003971 ORTHO05D004762 2.9e-140 503.1 526 53.4
Zm00001eb210690 Zea mays HOM05D003971 ORTHO05D004762 7.8e-138 495.0 545 53.0
TPR.G12938 Trifolium pratense HOM05D003971 ORTHO05D004762 5.6e-136 488.8 515 51.7
SHI34430 Sapria himalayana HOM05D003971 ORTHO05D004762 1.4e-134 484.2 457 54.0
unitig_21.g20335 Utricularia gibba HOM05D003971 ORTHO05D004762 5.2e-134 482.3 550 49.6
Potri.015G106300 Populus trichocarpa HOM05D003971 ORTHO05D004762 1.3e-132 477.6 469 57.1
Zm00001eb064630 Zea mays HOM05D003971 ORTHO05D004762 1.9e-131 473.8 546 51.6
HPP92_028338 Vanilla planifolia HOM05D003971 ORTHO05D004762 2.7e-130 469.9 556 48.6
COL.COLO4_37254 Corchorus olitorius HOM05D003971 ORTHO05D004762 2.8e-127 459.9 524 51.0
SEGI_34710 Sequoiadendron giganteum HOM05D003971 ORTHO05D004762 1.1e-126 458.0 339 65.2
Ah.11g046910 Amaranthus hybridus HOM05D001469 ORTHO05D001648 9.9e-125 451.4 322 66.5
Cc03_g15560 Coffea canephora HOM05D003971 ORTHO05D004762 9.2e-123 444.9 566 48.8
Nitab4.5_0000976g0020 Nicotiana tabacum HOM05D003971 ORTHO05D004762 1.6e-122 444.1 475 53.5
Aa31LG3G7450 Aethionema arabicum HOM05D003971 ORTHO05D004762 1.9e-120 437.2 269 75.8
RcHm_v2.0_Chr1g0373351 Rosa chinensis HOM05D003971 ORTHO05D004762 1.3e-116 424.5 314 69.7
Carub.0006s1829 Capsella rubella HOM05D003971 ORTHO05D004762 3.8e-116 422.9 355 56.9
Sc04g0000200 Simmondsia chinensis HOM05D003971 ORTHO05D004762 4.9e-116 422.5 458 52.4
AL6G31450 Arabidopsis lyrata HOM05D003971 ORTHO05D004762 4.6e-114 416.0 359 55.4
Aa31LG10G8100 Aethionema arabicum HOM05D003971 ORTHO05D004762 1.1e-112 411.4 377 53.6
BcaC04g19398 Brassica carinata HOM05D003971 ORTHO05D004762 4.3e-112 409.5 556 43.2
AT5G19920 Arabidopsis thaliana HOM05D003971 ORTHO05D004762 5.6e-112 409.1 389 51.7
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 6.2e-111 405.6 557 43.1
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 6.2e-111 405.6 557 43.1
BraA10t44057Z Brassica rapa HOM05D003971 ORTHO05D004762 6.2e-111 405.6 582 40.9
HanXRQChr17g0565911 Helianthus annuus HOM05D003971 ORTHO05D004762 1.1e-110 404.8 508 45.9
Sp6g24460 Schrenkiella parvula HOM05D003971 ORTHO05D004762 1.8e-110 404.1 569 41.5
A10p19810 Brassica napus HOM05D003971 ORTHO05D004762 2.4e-110 403.7 582 40.7
Mapoly0008s0248 Marchantia polymorpha HOM05D003971 ORTHO05D004762 2.0e-109 400.6 348 54.3
BcaB08g36556 Brassica carinata HOM05D003971 ORTHO05D004762 3.4e-109 399.8 572 41.3
Thhalv10013007m.g Eutrema salsugineum HOM05D003971 ORTHO05D004762 1.9e-107 394.0 601 39.3
SEGI_10226 Sequoiadendron giganteum HOM05D003971 ORTHO05D004762 7.9e-106 388.7 279 64.5
Pp3c11_18210 Physcomitrium patens HOM05D003971 ORTHO05D004762 1.3e-105 387.9 410 50.7
A02p05920 Brassica napus HOM05D003971 ORTHO05D004762 1.3e-103 381.3 553 40.5
BraA02t05544Z Brassica rapa HOM05D003971 ORTHO05D004762 1.3e-103 381.3 553 40.5
CARHR192940 Cardamine hirsuta HOM05D003971 ORTHO05D004762 1.3e-103 381.3 299 58.2
Solyc03g118220.3 Solanum lycopersicum HOM05D003971 ORTHO05D004762 1.1e-102 378.3 452 48.5
BNapus_Darmor_BZH_scaffold_38p01950 Brassica napus HOM05D003971 ORTHO05D004762 1.8e-102 377.5 563 38.9
BolC2t06996H Brassica oleracea HOM05D003971 ORTHO05D004762 1.8e-102 377.5 563 38.9
HPP92_011657 Vanilla planifolia HOM05D003971 ORTHO05D004762 1.2e-98 364.8 227 72.7
Actinidia25522 Actinidia chinensis HOM05D000512 ORTHO05D004762 1.8e-97 360.9 388 55.4
AagrBONN_evm.TU.Sc2ySwM_117.1595 Anthoceros agrestis HOM05D003971 ORTHO05D004762 2.5e-96 357.1 551 38.3
Eucgr.L01129 Eucalyptus grandis HOM05D003971 ORTHO05D004762 8.4e-92 342.0 209 77.0
Eucgr.L01124 Eucalyptus grandis HOM05D003971 ORTHO05D004762 7.1e-91 339.0 209 76.1
CBR_g3752 Chara braunii HOM05D003971 ORTHO05D004762 4.3e-80 303.1 298 49.7
SGA_v2.0_scaffold74G24722 Striga asiatica HOM05D003971 ORTHO05D004762 6.5e-76 289.3 551 38.3
Dinv13723 Davidia involucrata HOM05D003971 ORTHO05D004762 3.0e-73 280.4 326 52.5
Oeu061253.1 Olea europaea HOM05D003971 ORTHO05D004762 1.2e-66 258.5 338 49.4
SalBow7G2108 Salvia bowleyana HOM05D003971 ORTHO05D004762 8.5e-60 235.7 573 33.3
CDE02G0369 Ceratophyllum demersum HOM05D003971 ORTHO05D004762 9.7e-56 222.2 548 33.6
Lalb_Chr12g0202501 Lupinus albus HOM05D003971 ORTHO05D004762 8.2e-55 219.2 163 64.4
Dinv23223 Davidia involucrata HOM05D003971 ORTHO05D004762 2.0e-53 214.5 283 50.2
HPP92_011707 Vanilla planifolia HOM05D003971 ORTHO05D004762 2.6e-48 197.6 335 41.8
Hma1.2p1_0664F.1_g199006 Hydrangea macrophylla HOM05D003971 ORTHO05D004762 8.3e-47 192.6 124 71.8
SMO334G0050 Selaginella moellendorffii HOM05D003971 ORTHO05D004762 8.8e-41 172.6 259 37.1
Solyc03g118210.3 Solanum lycopersicum HOM05D003971 ORTHO05D004762 9.8e-40 169.1 104 75.0
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 2.4e-38 164.5 157 54.8
CSS0006697 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 1.2e-34 152.1 83 86.7
CSS0040784 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 7.3e-27 126.3 82 73.2
Dinv13722 Davidia involucrata HOM05D000475 ORTHO05D000343 1.6e-26 125.2 67 88.1
Dinv23224 Davidia involucrata HOM05D000475 ORTHO05D000343 8.0e-26 122.9 65 89.2
Lalb_Chr12g0202511 Lupinus albus HOM05D003971 ORTHO05D004762 2.0e-24 118.2 103 50.5
CDE02G2184 Ceratophyllum demersum HOM05D003971 ORTHO05D004762 8.3e-23 112.8 250 33.2
Os08g0511500 Oryza sativa ssp. japonica HOM05D003971 ORTHO05D004762 7.0e-22 109.8 94 57.4
Os03g0851600 Oryza sativa ssp. japonica HOM05D003971 ORTHO05D004762 8.3e-15 86.3 261 34.9
SEGI_28594 Sequoiadendron giganteum HOM05D003971 ORTHO05D004762 1.0e-12 79.3 259 32.8
Ah.11g046900 Amaranthus hybridus HOM05D003971 ORTHO05D004762 1.5e-11 75.5 194 33.5


User provided reference genes

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