Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 9.8e-138 493.4 244 100.0
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 8.7e-110 400.6 242 77.7
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 2.5e-109 399.1 236 80.1
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 3.3e-109 398.7 242 77.3
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 9.6e-109 397.1 237 80.2
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.6e-108 396.4 237 78.1
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 6.2e-108 394.4 237 77.6
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 6.2e-108 394.4 242 77.7
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 1.8e-107 392.9 236 78.4
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 1.5e-106 389.8 238 77.7
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 2.0e-106 389.4 238 77.7
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 7.6e-106 387.5 238 76.9
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 9.9e-106 387.1 238 76.9
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 9.9e-106 387.1 236 76.7
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 1.1e-104 383.6 241 76.3
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 5.4e-104 381.3 243 73.7
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.2e-103 380.2 242 75.6
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 1.2e-103 380.2 243 74.1
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 1.2e-103 380.2 236 77.5
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 3.5e-103 378.6 237 76.8
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 1.8e-102 376.3 243 72.4
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 2.3e-102 375.9 243 72.4
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 3.0e-102 375.6 288 64.2
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.9e-102 375.2 237 73.8
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 6.7e-102 374.4 236 76.3
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 1.1e-101 373.6 243 72.8
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.5e-101 373.2 236 76.7
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.9e-101 372.9 241 72.2
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 1.9e-101 372.9 236 73.7
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 1.9e-101 372.9 242 73.1
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 2.5e-101 372.5 241 72.6
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 2.5e-101 372.5 241 72.6
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 5.6e-101 371.3 243 72.0
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 9.6e-101 370.5 236 75.0
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 1.6e-100 369.8 238 73.5
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 2.8e-100 369.0 237 75.1
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 2.8e-100 369.0 240 72.1
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 3.7e-100 368.6 242 71.5
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 1.8e-99 366.3 237 74.7
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 4.0e-99 365.2 241 72.2
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 6.9e-99 364.4 242 69.0
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 9.0e-99 364.0 237 72.6
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.5e-98 363.2 237 71.7
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 2.0e-98 362.8 238 73.5
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 2.6e-98 362.5 237 73.4
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 4.5e-98 361.7 238 71.4
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 7.6e-98 360.9 250 72.0
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 7.6e-98 360.9 240 70.8
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 7.6e-98 360.9 243 69.1
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 9.9e-98 360.5 237 73.4
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 1.3e-97 360.1 237 71.3
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 2.2e-97 359.4 233 72.1
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 2.9e-97 359.0 243 70.4
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 3.8e-97 358.6 238 69.7
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 1.9e-96 356.3 236 72.0
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 2.4e-96 355.9 234 70.5
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 2.7e-95 352.4 242 68.6
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 3.0e-94 349.0 241 70.5
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 8.7e-94 347.4 242 67.4
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 1.1e-93 347.1 243 67.1
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.5e-93 346.7 237 68.4
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 3.3e-93 345.5 243 72.0
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 5.6e-93 344.7 237 69.6
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 7.4e-93 344.4 243 69.5
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 4.8e-92 341.7 242 65.7
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 4.8e-92 341.7 242 65.7
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 6.2e-92 341.3 269 62.1
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 6.2e-92 341.3 241 68.0
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.1e-91 340.5 242 65.7
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.4e-91 340.1 242 65.7
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.8e-91 339.7 242 65.7
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 1.8e-91 339.7 238 67.6
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 3.1e-91 339.0 238 67.6
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 4.0e-91 338.6 243 67.1
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 5.3e-91 338.2 242 65.7
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 3.4e-90 335.5 223 68.6
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 3.2e-88 328.9 234 65.0
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 3.5e-87 325.5 234 66.2
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 2.5e-85 319.3 238 65.1
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 2.5e-85 319.3 243 62.6
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 7.4e-85 317.8 243 62.6
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 6.9e-83 311.2 243 61.3
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 3.4e-82 308.9 242 65.3
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 2.5e-80 302.8 181 74.0
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.8e-76 289.3 232 58.6
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 8.2e-76 287.7 189 71.4
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 8.2e-76 287.7 182 74.7
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.1e-75 287.3 232 58.2
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 4.1e-75 285.4 183 72.7
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 4.5e-74 282.0 239 61.9
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 1.1e-72 277.3 182 72.5
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 1.0e-70 270.8 180 67.8
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 1.4e-70 270.4 182 68.7
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 3.9e-70 268.9 182 68.1
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 1.7e-68 263.5 234 53.0
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 3.1e-67 259.2 181 67.4
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 9.1e-67 257.7 232 51.3
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.2e-63 247.3 209 57.4
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 8.0e-63 244.6 235 48.9
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.8e-60 236.1 229 51.1
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 2.4e-59 233.0 178 62.9
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.9e-56 223.4 232 44.8
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 9.4e-56 221.1 230 47.4
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.2e-55 220.7 215 49.8
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 1.5e-53 213.8 199 50.3
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 1.9e-48 196.8 109 78.9
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 6.1e-47 191.8 147 54.4
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 8.3e-44 181.4 179 45.3
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.3e-36 157.5 181 43.6
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 3.1e-35 152.9 242 41.7
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 2.1e-31 140.2 212 35.4
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.2e-29 134.4 106 63.2
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 5.2e-22 109.0 269 26.0


User provided reference genes

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