Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.2e-197 693.0 346 100.0
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 1.2e-128 463.8 346 69.1
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 4.5e-128 461.8 343 69.1
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 8.5e-127 457.6 309 74.4
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 1.1e-126 457.2 345 68.1
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.9e-126 456.4 329 71.1
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 2.5e-126 456.1 293 78.8
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 4.2e-126 455.3 315 72.4
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 4.2e-126 455.3 326 72.1
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 5.5e-126 454.9 343 67.9
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 5.5e-126 454.9 342 67.8
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 9.4e-126 454.1 310 75.2
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 9.4e-126 454.1 348 68.7
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 3.6e-125 452.2 350 68.3
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 3.6e-125 452.2 314 73.6
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 1.4e-124 450.3 327 71.6
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 1.8e-124 449.9 350 68.0
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 2.3e-124 449.5 338 68.0
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.8e-124 447.6 356 65.7
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.5e-123 446.8 318 70.4
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 3.3e-123 445.7 313 71.2
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 4.4e-123 445.3 318 72.0
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 5.7e-123 444.9 320 70.9
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 3.7e-122 442.2 357 65.0
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 6.3e-122 441.4 305 72.5
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 1.4e-121 440.3 309 70.6
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.8e-121 439.9 329 67.2
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 4.1e-121 438.7 347 66.6
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 3.4e-120 435.6 303 71.0
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 1.0e-119 434.1 354 64.7
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.7e-119 433.3 328 67.1
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.5e-119 431.0 408 57.8
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.9e-118 429.9 291 74.9
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 4.2e-118 428.7 316 67.4
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 7.2e-118 427.9 340 65.3
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 9.4e-118 427.6 305 69.2
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 1.2e-117 427.2 316 69.3
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 2.1e-117 426.4 320 69.7
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.7e-117 426.0 326 66.3
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 2.7e-117 426.0 305 69.2
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 2.7e-117 426.0 344 65.4
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.6e-117 425.6 306 69.9
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 6.1e-117 424.9 345 64.1
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.0e-116 424.1 321 67.3
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 2.3e-116 422.9 312 68.9
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 3.0e-116 422.5 281 73.7
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 3.9e-116 422.2 311 68.8
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 6.7e-116 421.4 303 69.0
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 8.8e-116 421.0 293 71.7
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.1e-115 420.6 318 67.6
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 7.4e-115 417.9 307 67.8
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.3e-114 417.2 392 58.7
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.7e-114 416.8 297 70.4
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 4.8e-114 415.2 309 68.0
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 6.3e-114 414.8 349 62.2
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 1.8e-113 413.3 306 67.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 7.0e-113 411.4 310 67.7
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 7.0e-113 411.4 312 67.6
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 9.1e-113 411.0 354 61.0
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 2.6e-112 409.5 306 67.6
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 3.5e-112 409.1 293 69.6
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 7.7e-112 407.9 279 72.4
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.0e-111 407.5 344 61.3
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.3e-111 407.1 306 66.7
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 2.2e-111 406.4 295 68.5
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 3.8e-111 405.6 308 66.9
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.8e-111 405.6 334 62.3
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 1.5e-110 403.7 311 66.6
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 1.5e-110 403.7 305 67.2
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 1.9e-110 403.3 298 68.5
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 7.2e-110 401.4 294 67.7
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 9.4e-110 401.0 297 67.7
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 1.6e-109 400.2 309 66.3
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 6.1e-109 398.3 311 65.9
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 4.4e-107 392.1 333 61.3
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 4.4e-107 392.1 328 62.2
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 1.8e-105 386.7 279 70.6
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.8e-105 386.7 307 68.4
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 4.1e-105 385.6 292 67.5
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.0e-103 380.9 334 61.7
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.9e-102 376.7 322 64.0
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.0e-100 369.0 300 66.7
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.5e-99 367.1 335 58.5
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 7.5e-99 364.8 278 67.3
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 9.8e-99 364.4 317 61.5
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.7e-98 363.6 315 60.0
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 4.8e-98 362.1 297 60.3
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 4.1e-97 359.0 217 81.6
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 1.5e-94 350.5 273 65.6
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.5e-91 340.5 278 65.8
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 2.6e-91 339.7 295 56.6
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 5.9e-88 328.6 295 59.0
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 5.9e-88 328.6 271 59.8
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.1e-78 297.7 201 72.1
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 4.7e-77 292.4 292 58.9
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.4e-73 280.0 404 40.3
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 2.3e-68 263.5 221 62.0
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.0e-63 248.1 156 76.9
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.9e-57 227.3 311 45.0
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 9.6e-54 214.9 148 73.6
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 1.2e-53 214.5 168 64.3
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 9.0e-52 208.4 157 68.2
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 4.3e-46 189.5 292 43.5
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 4.8e-45 186.0 151 63.6
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 3.0e-39 166.8 105 76.2
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.3e-38 163.3 222 49.1
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.4e-38 162.2 190 53.2
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 3.7e-37 159.8 114 66.7
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 5.8e-35 152.5 105 70.5
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 1.8e-31 141.0 108 66.7
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 6.2e-29 132.5 82 75.6
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 6.3e-21 105.9 73 65.8
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 6.9e-20 102.4 144 43.1
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 8.5e-18 95.5 60 75.0
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 8.5e-18 95.5 76 65.8
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-14 85.1 98 52.0
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.5e-14 84.7 60 68.3
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.7e-10 71.2 99 43.4
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 3.2e-09 67.0 50 66.0
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 2.1e-08 64.3 81 44.4
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 7.9e-08 62.4 41 70.7
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 4.4e-06 56.6 42 64.3
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 7.4e-06 55.8 34 67.6


User provided reference genes

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