Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 1.8e-218 762.3 385 100.0
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 1.9e-127 459.9 390 64.1
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 2.5e-127 459.5 359 65.5
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 1.6e-126 456.8 385 63.4
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 4.4e-124 448.7 349 64.2
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 1.4e-122 443.7 385 62.6
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.6e-121 440.3 349 63.6
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 3.5e-121 439.1 314 71.0
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 1.5e-119 433.7 382 62.3
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 1.6e-118 430.3 382 60.7
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 5.2e-117 425.2 363 62.0
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 4.4e-116 422.2 354 63.0
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 2.8e-115 419.5 385 57.9
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 8.3e-115 417.9 404 55.9
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 8.3e-115 417.9 384 59.4
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.1e-114 417.5 404 55.9
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 1.1e-114 417.5 298 71.1
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 2.4e-114 416.4 412 56.3
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 3.1e-114 416.0 348 61.8
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 1.6e-113 413.7 379 59.1
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 1.0e-112 411.0 383 59.3
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 1.7e-112 410.2 353 59.8
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 3.8e-112 409.1 366 58.7
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 8.6e-112 407.9 381 56.2
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 5.6e-111 405.2 315 66.3
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 1.2e-110 404.1 380 59.7
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 4.7e-110 402.1 395 55.2
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 8.0e-110 401.4 344 59.3
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 3.0e-109 399.4 310 65.2
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 4.0e-109 399.1 340 61.5
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 1.2e-108 397.5 398 54.3
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 2.0e-108 396.7 327 62.4
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 3.4e-108 396.0 328 61.3
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 3.4e-108 396.0 294 66.7
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 5.7e-108 395.2 386 53.9
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 7.5e-108 394.8 316 63.6
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 7.5e-108 394.8 374 56.4
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.2e-107 393.3 320 62.2
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 3.7e-107 392.5 349 59.0
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 3.7e-107 392.5 375 56.3
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 6.4e-107 391.7 377 56.8
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 8.3e-107 391.3 351 58.4
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 1.4e-106 390.6 395 53.9
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 1.8e-106 390.2 311 61.7
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 1.8e-106 390.2 311 61.7
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 4.1e-106 389.0 318 61.3
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 7.0e-106 388.3 351 59.3
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 7.0e-106 388.3 338 59.8
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 9.2e-106 387.9 353 59.2
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 3.5e-105 386.0 379 55.9
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 3.5e-105 386.0 339 59.0
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 4.6e-105 385.6 319 63.0
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 7.8e-105 384.8 417 50.8
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 3.0e-104 382.9 345 56.8
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 1.5e-103 380.6 390 53.3
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 1.9e-103 380.2 368 56.0
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.5e-103 379.8 304 64.5
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.3e-103 379.0 410 50.2
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 5.6e-103 378.6 366 56.0
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 9.5e-103 377.9 376 55.1
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 1.2e-102 377.5 388 53.1
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 1.8e-101 373.6 329 58.1
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 2.3e-101 373.2 388 53.4
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 2.6e-100 369.8 394 53.3
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 1.7e-99 367.1 389 53.2
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 1.2e-97 360.9 334 56.3
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 2.7e-97 359.8 338 57.7
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 3.5e-97 359.4 414 50.7
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 1.7e-96 357.1 327 56.0
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 3.0e-96 356.3 332 55.7
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 5.0e-96 355.5 282 63.5
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 1.9e-95 353.6 333 54.7
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 3.3e-95 352.8 328 56.1
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 9.5e-95 351.3 370 53.2
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 9.5e-95 351.3 373 52.0
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 9.5e-95 351.3 294 60.5
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 4.7e-94 349.0 356 56.7
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 1.1e-93 347.8 333 54.7
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 5.2e-93 345.5 333 53.8
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 6.8e-93 345.1 334 53.9
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 1.2e-92 344.4 306 62.1
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 3.4e-92 342.8 233 70.8
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 3.4e-92 342.8 391 50.6
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 4.4e-92 342.4 374 51.9
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 1.7e-91 340.5 331 53.5
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 3.2e-90 336.3 236 68.6
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 4.1e-90 335.9 378 49.5
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 7.1e-90 335.1 342 52.3
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 1.6e-89 334.0 344 52.0
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 2.7e-89 333.2 346 51.7
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 3.5e-89 332.8 358 55.9
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 4.6e-89 332.4 295 58.6
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 1.9e-87 327.0 322 53.1
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 3.6e-86 322.8 326 51.8
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 7.1e-82 308.5 379 49.1
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 7.6e-76 288.5 221 62.4
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-75 287.7 221 62.4
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 2.4e-74 283.5 324 46.3
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 1.2e-68 264.6 361 40.7
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 4.9e-67 259.2 191 69.1
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 1.2e-60 238.0 355 38.3
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 5.5e-58 229.2 258 51.6
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 3.0e-56 223.4 177 63.3
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 1.6e-54 217.6 250 49.6
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 6.5e-51 205.7 233 48.1
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 6.9e-45 185.7 196 49.5
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 1.2e-44 184.9 315 37.1
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 3.4e-44 183.3 263 39.2
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 5.9e-44 182.6 294 37.1
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.7e-43 181.0 185 54.1
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 6.5e-43 179.1 188 50.5
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 3.2e-42 176.8 272 38.6
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.2e-42 176.8 263 39.9
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 2.1e-41 174.1 318 34.6
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.9e-39 167.5 332 32.5
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 2.4e-37 160.6 302 33.1
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 1.5e-36 157.9 146 56.8
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-35 154.8 251 36.3
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 1.4e-34 151.4 148 49.3
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.9e-34 151.0 254 35.8
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 6.1e-33 146.0 136 50.7
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 5.1e-32 142.9 270 32.6
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.2e-25 121.7 192 40.1
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 1.4e-24 118.2 249 33.7
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 4.2e-18 96.7 233 26.6
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 8.0e-09 65.9 130 37.7
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 1.8e-08 64.7 50 58.0
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 3.0e-08 63.9 71 49.3


User provided reference genes

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