Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 5.3e-93 344.4 174 100.0
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 1.2e-57 226.9 170 66.5
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 1.4e-56 223.4 170 65.9
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 2.0e-55 219.5 170 64.7
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 2.2e-54 216.1 173 64.2
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.8e-54 215.7 171 64.9
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 2.8e-54 215.7 172 64.0
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 4.8e-54 214.9 170 61.8
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 1.1e-53 213.8 175 64.6
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 1.4e-53 213.4 171 63.7
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 4.1e-53 211.8 170 64.1
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 2.0e-52 209.5 170 62.9
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 6.5e-51 204.5 170 60.6
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 6.5e-51 204.5 170 60.6
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 6.5e-51 204.5 170 60.6
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.4e-50 203.4 170 60.0
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 3.2e-50 202.2 180 58.9
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 6.1e-49 198.0 171 61.4
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.4e-48 196.8 171 60.8
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 2.3e-48 196.1 174 60.9
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 5.2e-48 194.9 166 59.0
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 5.2e-48 194.9 173 59.5
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 5.2e-48 194.9 173 59.5
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 5.2e-48 194.9 174 58.0
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.1e-47 193.7 171 56.1
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.5e-47 193.4 171 59.6
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 2.0e-47 193.0 170 57.6
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 2.6e-47 192.6 173 59.5
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 2.6e-47 192.6 175 58.3
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 7.4e-47 191.0 170 58.2
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 1.3e-46 190.3 162 60.5
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 4.8e-46 188.3 160 61.2
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.4e-45 186.8 169 58.0
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 2.4e-45 186.0 171 56.7
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 2.4e-45 186.0 171 56.7
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 2.4e-45 186.0 173 54.3
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 3.1e-45 185.7 173 56.6
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 4.1e-45 185.3 171 56.7
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 4.1e-45 185.3 171 57.3
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 4.1e-45 185.3 170 57.1
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 5.3e-45 184.9 171 56.7
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 5.3e-45 184.9 171 56.1
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 5.3e-45 184.9 171 56.1
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 5.3e-45 184.9 171 56.1
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 5.3e-45 184.9 176 57.4
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 7.0e-45 184.5 172 55.8
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 1.2e-44 183.7 173 57.8
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 2.6e-44 182.6 170 54.1
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 2.6e-44 182.6 176 56.2
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 7.7e-44 181.0 171 56.1
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 3.2e-42 175.6 171 55.0
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 4.2e-42 175.3 170 55.3
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 1.2e-41 173.7 170 55.9
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 1.2e-41 173.7 171 52.6
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 2.7e-41 172.6 171 52.0
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 2.7e-41 172.6 170 51.8
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 6.1e-41 171.4 161 55.3
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 8.0e-41 171.0 170 56.5
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 1.4e-40 170.2 161 54.7
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 1.8e-40 169.9 170 55.9
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 4.0e-40 168.7 175 51.4
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 6.7e-40 167.9 170 52.4
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 2.6e-39 166.0 170 52.4
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 5.7e-39 164.9 172 51.7
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 9.7e-39 164.1 172 51.7
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 1.3e-38 163.7 176 50.6
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 3.7e-38 162.2 172 51.2
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 4.8e-38 161.8 174 50.0
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 1.4e-37 160.2 170 52.4
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 1.8e-37 159.8 169 52.1
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.8e-37 159.8 170 52.4
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 2.4e-37 159.5 168 50.0
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 1.6e-36 156.8 170 49.4
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 3.8e-35 152.1 172 50.0
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 8.5e-35 151.0 170 50.0
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 1.5e-34 150.2 163 52.8
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 7.2e-34 147.9 173 47.4
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 1.6e-33 146.7 170 47.1
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 2.7e-33 146.0 146 52.1
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 8.8e-32 141.0 171 46.8
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 2.6e-31 139.4 171 45.6
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 1.1e-29 134.0 169 46.7
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 1.1e-29 134.0 123 58.5
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 9.1e-29 131.0 170 42.4
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 7.7e-28 127.9 171 42.7
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 7.7e-28 127.9 171 43.3
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 3.8e-27 125.6 170 44.1
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 1.9e-26 123.2 148 47.3
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 5.5e-26 121.7 170 41.2
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 7.2e-26 121.3 170 43.5
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.6e-25 120.2 143 46.2
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 6.1e-25 118.2 144 45.1
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 6.3e-22 108.2 171 39.2
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 3.3e-18 95.9 133 42.1
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 2.1e-17 93.2 153 39.9
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 2.2e-14 83.2 106 42.5
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 1.4e-13 80.5 140 35.0
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 1.0e-11 74.3 135 32.6
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.3e-11 73.2 141 30.5
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 5.0e-11 72.0 161 29.8
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 7.3e-10 68.2 63 54.0
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 4.0e-08 62.4 70 48.6
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 1.5e-07 60.5 141 24.1
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 7.5e-07 58.2 79 41.8


User provided reference genes

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