Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 2.7e-310 1067.8 521 100.0
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 1.4e-221 773.1 502 74.7
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 3.1e-221 771.9 515 72.4
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.5e-220 769.6 516 72.3
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 2.6e-220 768.8 522 71.5
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 4.9e-219 764.6 519 72.3
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 6.4e-219 764.2 521 71.4
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 1.1e-218 763.5 480 75.6
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 1.9e-218 762.7 522 71.5
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 1.9e-218 762.7 523 70.7
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 7.0e-218 760.8 516 71.9
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 3.5e-217 758.4 499 72.1
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 1.0e-216 756.9 479 74.5
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 3.9e-216 755.0 504 72.6
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 6.6e-216 754.2 518 70.7
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.3e-215 751.5 504 72.4
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 4.3e-215 751.5 537 69.8
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 5.6e-215 751.1 515 70.5
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 4.7e-214 748.0 467 76.0
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.8e-213 746.1 519 69.9
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 1.2e-212 743.4 524 68.5
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 2.0e-212 742.7 516 70.3
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 4.4e-212 741.5 471 74.1
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 7.5e-212 740.7 526 68.6
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 9.9e-212 740.3 497 74.2
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 1.7e-211 739.6 464 76.1
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 3.7e-211 738.4 522 69.9
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 3.7e-211 738.4 461 75.3
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 8.3e-211 737.3 503 72.4
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.4e-210 736.5 533 68.3
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 2.4e-210 735.7 491 72.5
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 5.4e-210 734.6 502 71.3
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 5.4e-210 734.6 514 69.5
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 9.2e-210 733.8 511 71.0
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 1.2e-209 733.4 498 70.7
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.3e-208 729.9 513 69.4
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 2.3e-208 729.2 466 73.8
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 2.3e-208 729.2 479 72.9
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 3.0e-208 728.8 495 70.5
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 6.6e-208 727.6 453 76.6
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 8.6e-208 727.2 501 71.1
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 8.6e-208 727.2 513 70.8
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.5e-207 726.5 508 69.7
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 4.3e-207 724.9 457 74.8
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 5.6e-207 724.5 502 70.3
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.2e-206 723.4 479 72.2
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 1.6e-206 723.0 515 68.9
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 2.1e-206 722.6 507 69.8
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 2.8e-206 722.2 464 73.9
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 2.8e-206 722.2 497 70.0
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 2.8e-206 722.2 501 69.5
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 4.7e-206 721.5 503 69.8
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 6.2e-206 721.1 495 71.3
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 8.1e-206 720.7 513 68.8
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.1e-205 720.3 484 72.7
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.4e-205 719.9 502 69.7
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 1.8e-205 719.5 513 68.8
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 3.1e-205 718.8 476 72.1
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 5.2e-205 718.0 443 75.6
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 6.8e-205 717.6 534 66.9
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 6.8e-205 717.6 471 70.5
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 8.9e-205 717.2 502 69.3
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 2.6e-204 715.7 475 71.2
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 3.4e-204 715.3 475 71.4
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 3.4e-204 715.3 513 68.4
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 4.4e-204 714.9 524 67.4
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 1.3e-203 713.4 478 70.7
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 1.7e-203 713.0 478 70.9
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 2.2e-203 712.6 478 70.7
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 2.2e-203 712.6 506 67.6
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 2.9e-203 712.2 465 74.8
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 2.9e-203 712.2 477 70.9
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 3.8e-203 711.8 486 70.8
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 3.8e-203 711.8 502 69.5
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 4.9e-203 711.4 486 70.8
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 1.1e-202 710.3 476 71.2
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 1.1e-202 710.3 479 69.1
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 3.2e-202 708.8 478 70.7
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.6e-201 706.4 461 72.5
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 2.7e-201 705.7 473 72.3
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 3.5e-201 705.3 516 67.6
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 3.5e-201 705.3 462 70.8
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.3e-200 702.6 504 70.4
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 3.9e-200 701.8 529 66.2
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 6.6e-200 701.0 517 65.6
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 1.9e-199 699.5 451 72.1
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 3.1e-197 692.2 453 71.5
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 2.4e-194 682.6 454 70.5
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 4.2e-194 681.8 451 70.5
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 4.6e-193 678.3 450 70.0
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.8e-184 649.8 488 66.0
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 8.7e-184 647.5 520 60.8
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 2.4e-173 612.8 474 63.5
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 7.6e-172 607.8 469 65.2
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 6.5e-171 604.7 464 64.7
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 1.9e-170 603.2 476 59.2
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 2.1e-169 599.7 494 60.1
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.2e-164 583.9 445 61.6
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 3.4e-164 582.4 478 57.7
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.7e-163 580.1 419 67.8
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 1.5e-159 567.0 503 57.9
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 2.8e-158 562.8 385 71.7
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 3.4e-156 555.8 366 72.1
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 4.4e-135 485.7 317 73.5
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 4.2e-130 469.2 485 53.8
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 1.2e-121 441.0 463 47.9
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 3.5e-116 422.9 273 73.6
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 5.6e-114 415.6 476 46.8
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 4.4e-111 406.0 275 70.9
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 1.3e-99 367.9 494 43.3
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.3e-81 308.1 451 38.4
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 3.1e-40 170.6 100 76.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 5.3e-40 169.9 226 40.3
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 7.0e-32 142.9 103 65.0
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 3.5e-31 140.6 96 68.8
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 3.5e-31 140.6 96 68.8
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 3.5e-31 140.6 96 68.8
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 1.1e-24 119.0 279 31.2
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 1.6e-20 105.1 78 61.5
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 2.0e-15 88.2 57 70.2
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 4.4e-10 70.5 43 79.1
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 9.8e-10 69.3 71 54.9
BcaC08g45232 Brassica carinata HOM05D000289 ORTHO05D000208 1.2e-07 62.4 48 56.2
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.0e-06 59.3 32 84.4
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 2.9e-06 57.8 40 60.0


User provided reference genes

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