Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1186 Cannabis sativa HOM05D002995 ORTHO05D003319 9.5e-129 463.8 279 100.0
CANSAT56G0839 Cannabis sativa HOM05D002995 ORTHO05D003319 2.4e-119 432.6 314 83.8
CANSAT56G3219 Cannabis sativa HOM05D002995 ORTHO05D003319 1.1e-103 380.6 317 75.4
CANSAT56G3867 Cannabis sativa HOM05D002995 ORTHO05D003319 3.1e-103 379.0 318 75.8
Lj7A681T61 Lonicera japonica HOM05D002995 ORTHO05D003319 6.0e-22 109.0 273 37.0
Oeu033213.1 Olea europaea HOM05D002995 ORTHO05D003319 2.1e-19 100.5 232 37.5
Haze_25953 Corylus avellana HOM05D002995 ORTHO05D003319 8.1e-19 98.6 250 38.0
Gorai.009G034000 Gossypium raimondii HOM05D002995 ORTHO05D003319 2.3e-18 97.1 260 37.7
ClCG03G015340 Citrullus lanatus HOM05D002995 ORTHO05D003319 3.1e-18 96.7 264 37.1
Gohir.D05G033600 Gossypium hirsutum HOM05D002995 ORTHO05D003319 5.2e-18 95.9 260 37.7
CsaV3_1G040710 Cucumis sativus L. HOM05D005151 ORTHO05D006322 1.5e-17 94.4 274 36.5
Prupe.7G204200 Prunus persica HOM05D002995 ORTHO05D003319 1.5e-17 94.4 270 38.5
MD15G1212500 Malus domestica HOM05D002995 ORTHO05D003319 2.6e-17 93.6 264 38.3
COL.COLO4_18154 Corchorus olitorius HOM05D002995 ORTHO05D003319 3.4e-17 93.2 235 34.5
Dinv42353 Davidia involucrata HOM05D002995 ORTHO05D003319 4.4e-17 92.8 274 36.1
Duzib150G1106 Durio zibethinus HOM05D002995 ORTHO05D003319 9.9e-17 91.7 228 37.7
Gohir.A05G032200 Gossypium hirsutum HOM05D002995 ORTHO05D003319 1.3e-16 91.3 269 37.5
Ca_13141_v3 Cicer arietinum L. HOM05D002995 ORTHO05D003319 3.7e-16 89.7 240 34.6
Thecc.09G082700 Theobroma cacao HOM05D002995 ORTHO05D003319 3.7e-16 89.7 156 42.3
Dinv36799 Davidia involucrata HOM05D002995 ORTHO05D003319 8.3e-16 88.6 246 36.6
Duzib168G1660 Durio zibethinus HOM05D002995 ORTHO05D003319 3.2e-15 86.7 175 43.4
Rhsim05G0013900 Rhododendron simsii HOM05D002995 ORTHO05D003319 3.2e-15 86.7 168 40.5
RcHm_v2.0_Chr2g0094141 Rosa chinensis HOM05D002995 ORTHO05D003319 4.1e-15 86.3 267 36.7
MD02G1085400 Malus domestica HOM05D002995 ORTHO05D003319 5.4e-15 85.9 276 34.1
VMungo1309G0156 Vigna mungo HOM05D002995 ORTHO05D003319 7.1e-15 85.5 238 32.8
TWI34G1727 Tripterygium wilfordii HOM05D002995 ORTHO05D003319 1.2e-14 84.7 256 36.3
TWI63G1002 Tripterygium wilfordii HOM05D002995 ORTHO05D003319 1.2e-14 84.7 167 43.7
Manes.16G098800 Manihot esculenta HOM05D002995 ORTHO05D003319 3.5e-14 83.2 266 32.0
Sed0003823 Sechium edule HOM05D002995 ORTHO05D003319 1.0e-13 81.6 266 35.7
TPR.G18092 Trifolium pratense HOM05D002995 ORTHO05D003319 1.0e-13 81.6 184 42.9
Actinidia39694 Actinidia chinensis HOM05D002995 ORTHO05D003319 1.7e-13 80.9 212 31.1
Lj6g0008206 Lotus japonicus HOM05D002995 ORTHO05D003319 1.7e-13 80.9 304 34.9
BcaC04g20016 Brassica carinata HOM05D002995 ORTHO05D003319 2.3e-13 80.5 174 43.1
C09p48760 Brassica napus HOM05D002995 ORTHO05D003319 2.3e-13 80.5 174 43.1
BolC9t57723H Brassica oleracea HOM05D002995 ORTHO05D003319 2.3e-13 80.5 174 43.1
BraA10t43532Z Brassica rapa HOM05D002995 ORTHO05D003319 5.1e-13 79.3 174 43.1
Potri.006G145900 Populus trichocarpa HOM05D002995 ORTHO05D003319 5.1e-13 79.3 278 34.9
Psat1g133200 Pisum sativum HOM05D002995 ORTHO05D003319 8.6e-13 78.6 276 34.4
Medtr2g040580 Medicago truncatula HOM05D002995 ORTHO05D003319 1.5e-12 77.8 283 33.2
Oeu010825.1 Olea europaea HOM05D002995 ORTHO05D003319 2.5e-12 77.0 289 35.3
A10p14400 Brassica napus HOM05D002995 ORTHO05D003319 3.3e-12 76.6 174 42.5
Manes.03G037400 Manihot esculenta HOM05D002995 ORTHO05D003319 3.3e-12 76.6 153 45.8
Oeu010824.1 Olea europaea HOM05D002995 ORTHO05D003319 7.3e-12 75.5 213 33.3
Cpa.g.sc28.113 Carica papaya HOM05D002995 ORTHO05D003319 9.5e-12 75.1 268 34.0
Nitab4.5_0002842g0010 Nicotiana tabacum HOM05D002995 ORTHO05D003319 9.5e-12 75.1 137 44.5
Phvul.009G229500 Phaseolus vulgaris HOM05D002995 ORTHO05D003319 9.5e-12 75.1 240 31.2
THA.LOC104813497 Tarenaya hassleriana HOM05D002995 ORTHO05D003319 1.2e-11 74.7 184 40.2
Cfa003043 Carpinus fangiana HOM05D002995 ORTHO05D003319 2.1e-11 73.9 204 46.1
Thhalv10013114m.g Eutrema salsugineum HOM05D002995 ORTHO05D003319 2.1e-11 73.9 187 42.2
BcaB05g22313 Brassica carinata HOM05D002995 ORTHO05D003319 2.8e-11 73.6 247 34.8
Sp6g18790 Schrenkiella parvula HOM05D002995 ORTHO05D003319 3.6e-11 73.2 188 39.4
Glyma.15G172900 Glycine max HOM05D002995 ORTHO05D003319 4.7e-11 72.8 295 32.5
PGR142G1322 Punica granatum HOM05D002995 ORTHO05D003319 6.2e-11 72.4 115 51.3
BcaC03g18570 Brassica carinata HOM05D002995 ORTHO05D003319 8.1e-11 72.0 136 41.9
C02p14670 Brassica napus HOM05D002995 ORTHO05D003319 8.1e-11 72.0 136 41.9
BolC2t07593H Brassica oleracea HOM05D002995 ORTHO05D003319 8.1e-11 72.0 136 41.9
PGSC0003DMG400016079 Solanum tuberosum HOM05D002995 ORTHO05D003319 8.1e-11 72.0 129 38.8
MSTRG.19484 Avicennia marina HOM05D002995 ORTHO05D003319 1.8e-10 70.9 220 34.1
Glyma.09G067000 Glycine max HOM05D002995 ORTHO05D003319 2.4e-10 70.5 127 41.7
Actinidia25228 Actinidia chinensis HOM05D002995 ORTHO05D003319 5.2e-10 69.3 244 33.2
Gohir.D08G266700 Gossypium hirsutum HOM05D002995 ORTHO05D003319 6.8e-10 68.9 243 31.7
FvH4_1g08080 Fragaria vesca HOM05D002995 ORTHO05D003319 8.9e-10 68.6 208 41.3
BraA02t05944Z Brassica rapa HOM05D002995 ORTHO05D003319 1.2e-09 68.2 132 45.5
MELO3C015498.2 Cucumis melo HOM05D002995 ORTHO05D003319 1.2e-09 68.2 274 31.8
Nn6g35558 Nelumbo nucifera HOM05D002995 ORTHO05D003319 1.2e-09 68.2 217 31.8
Nitab4.5_0002079g0050 Nicotiana tabacum HOM05D002995 ORTHO05D003319 1.5e-09 67.8 124 39.5
Sed0016575 Sechium edule HOM05D002995 ORTHO05D003319 1.5e-09 67.8 249 32.1
A02p08740 Brassica napus HOM05D002995 ORTHO05D003319 2.0e-09 67.4 132 44.7
TAR413G0002 Trochodendron aralioides HOM05D002995 ORTHO05D003319 2.0e-09 67.4 273 31.5
FAN19G1307 Fragaria x ananassa HOM05D002995 ORTHO05D003319 2.6e-09 67.0 207 40.6
BcaB08g36011 Brassica carinata HOM05D002995 ORTHO05D003319 3.4e-09 66.6 262 33.6
Sc08g0008690 Simmondsia chinensis HOM05D002995 ORTHO05D003319 3.4e-09 66.6 203 30.5
Sopen07g020330 Solanum pennellii HOM05D002995 ORTHO05D003319 7.6e-09 65.5 221 30.8
Lalb_Chr11g0074441 Lupinus albus HOM05D002995 ORTHO05D003319 9.9e-09 65.1 193 30.1
CARHR270830 Cardamine hirsuta HOM05D002995 ORTHO05D003319 1.3e-08 64.7 214 36.9
AT5G57070 Arabidopsis thaliana HOM05D002995 ORTHO05D003319 1.7e-08 64.3 165 41.2
Solyc07g041070.3 Solanum lycopersicum HOM05D002995 ORTHO05D003319 2.2e-08 63.9 221 29.4
Nitab4.5_0009954g0010 Nicotiana tabacum HOM05D002995 ORTHO05D003319 2.9e-08 63.5 157 33.1
Carub.0008s1758 Capsella rubella HOM05D002995 ORTHO05D003319 4.9e-08 62.8 172 40.1
FAN23G3008 Fragaria x ananassa HOM05D002995 ORTHO05D003319 4.9e-08 62.8 207 38.2
Nitab4.5_0000024g0020 Nicotiana tabacum HOM05D002995 ORTHO05D003319 4.9e-08 62.8 161 34.2
Nn8g38758 Nelumbo nucifera HOM05D002995 ORTHO05D003319 6.4e-08 62.4 216 29.2
THA.LOC104811758 Tarenaya hassleriana HOM05D002995 ORTHO05D003319 1.1e-07 61.6 120 39.2
Aa31LG3G12970 Aethionema arabicum HOM05D002995 ORTHO05D003319 1.4e-07 61.2 254 32.3
Cc06_g11810 Coffea canephora HOM05D002995 ORTHO05D003319 1.4e-07 61.2 203 29.6
Peaxi162Scf00353g00001 Petunia axillaris HOM05D002995 ORTHO05D003319 1.4e-07 61.2 217 30.0
arahy.Tifrunner.gnm1.ann1.Y3EBK0 Arachis hypogaea HOM05D002995 ORTHO05D003319 1.9e-07 60.8 224 29.9
Sabra06G0115500 Salix brachista HOM05D002995 ORTHO05D003319 1.9e-07 60.8 269 33.5
FAN26G3271 Fragaria x ananassa HOM05D002995 ORTHO05D003319 2.4e-07 60.5 289 35.6
AL8G32980 Arabidopsis lyrata HOM05D002995 ORTHO05D003319 5.4e-07 59.3 173 39.3
Aqoxy7G01134 Aquilegia oxysepala HOM05D002995 ORTHO05D003319 7.1e-07 58.9 108 38.0
AUR62009861 Chenopodium quinoa HOM05D002995 ORTHO05D003319 9.2e-07 58.5 134 32.8
QL05p009417 Quercus lobata HOM05D002995 ORTHO05D003319 2.1e-06 57.4 121 35.5
FvH4_6g34220 Fragaria vesca HOM05D002995 ORTHO05D003319 3.5e-06 56.6 175 32.0
AUR62001509 Chenopodium quinoa HOM05D002995 ORTHO05D003319 4.6e-06 56.2 117 35.0
Dinv04085 Davidia involucrata HOM05D002995 ORTHO05D003319 6.0e-06 55.8 91 40.7
FAN26G0763 Fragaria x ananassa HOM05D002995 ORTHO05D003319 6.0e-06 55.8 289 35.3
FAN05G1863 Fragaria x ananassa HOM05D002995 ORTHO05D003319 7.8e-06 55.5 177 31.1
SalBow6G1014 Salvia bowleyana HOM05D002995 ORTHO05D003319 7.8e-06 55.5 83 43.4


User provided reference genes

Program Settings