Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 2.8e-171 605.1 291 100.0
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 8.2e-123 444.1 275 78.9
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 4.9e-120 434.9 279 74.9
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 4.9e-120 434.9 279 74.9
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 6.5e-120 434.5 275 76.0
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 8.4e-120 434.1 275 75.6
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 1.4e-119 433.3 275 75.3
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 1.9e-119 433.0 275 76.4
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 1.9e-119 433.0 275 75.3
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 3.2e-119 432.2 275 76.0
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 1.2e-118 430.3 275 76.7
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 1.2e-118 430.3 275 74.9
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.6e-118 429.9 275 74.9
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 7.9e-118 427.6 275 74.9
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 1.0e-117 427.2 275 74.5
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 1.3e-117 426.8 275 75.6
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 3.9e-117 425.2 275 74.2
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 8.7e-117 424.1 275 74.2
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 1.1e-116 423.7 278 73.7
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 1.5e-116 423.3 278 73.7
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 2.5e-116 422.5 275 73.1
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 9.7e-116 420.6 276 72.5
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 6.3e-115 417.9 276 72.1
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 2.4e-114 416.0 276 72.5
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 5.3e-114 414.8 275 70.9
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 1.3e-112 410.2 278 69.1
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 2.2e-112 409.5 278 68.3
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 2.9e-112 409.1 277 69.3
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 2.5e-111 406.0 275 72.4
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 2.5e-111 406.0 276 71.0
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 2.7e-110 402.5 275 70.9
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 4.6e-110 401.7 273 68.5
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 7.9e-110 401.0 283 68.6
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 5.1e-109 398.3 275 68.0
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 1.3e-107 393.7 275 68.7
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 2.8e-107 392.5 275 67.6
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 3.7e-107 392.1 275 68.4
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 1.4e-106 390.2 261 72.0
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 2.4e-106 389.4 274 70.1
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 6.9e-106 387.9 271 66.8
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 9.1e-106 387.5 275 67.6
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 3.8e-104 382.1 273 68.5
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 5.5e-103 378.3 291 62.2
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 1.0e-101 374.0 256 69.1
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 3.7e-99 365.5 274 63.5
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 6.3e-99 364.8 246 71.1
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 5.3e-98 361.7 275 63.6
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 5.3e-98 361.7 274 62.8
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 1.0e-96 357.5 275 65.5
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 1.3e-96 357.1 246 69.9
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 8.5e-96 354.4 234 73.5
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 1.9e-95 353.2 249 66.3
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 1.5e-92 343.6 259 65.3
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 1.3e-91 340.5 278 60.8
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 3.7e-91 339.0 262 64.1
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 3.7e-91 339.0 262 64.1
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 4.8e-91 338.6 258 64.3
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 6.3e-91 338.2 262 64.1
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 6.3e-91 338.2 262 64.1
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 8.2e-91 337.8 225 73.3
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 1.4e-90 337.0 258 63.6
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 3.1e-90 335.9 262 63.4
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 4.1e-90 335.5 257 65.0
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 1.3e-88 330.5 254 63.4
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 2.2e-88 329.7 283 58.3
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 4.7e-86 322.0 288 55.6
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 2.6e-84 316.2 246 63.4
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 5.7e-84 315.1 278 56.1
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 3.1e-82 309.3 256 58.2
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 2.3e-56 223.4 293 42.7
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 3.9e-56 222.6 171 66.7
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 3.4e-52 209.5 267 43.4
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 1.4e-50 204.1 171 60.2
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 1.1e-42 177.9 274 37.6
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 2.0e-36 157.1 141 58.2
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 3.9e-32 142.9 262 33.2
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 1.3e-22 111.3 154 40.3
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 4.8e-22 109.4 131 48.9


User provided reference genes

Program Settings