Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 5.5e-150 534.3 266 100.0
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 2.0e-75 286.6 179 74.9
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 2.6e-75 286.2 180 72.2
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 1.7e-74 283.5 221 64.3
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 2.9e-74 282.7 179 75.4
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 1.4e-73 280.4 174 76.4
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 3.2e-73 279.3 179 73.2
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 4.1e-73 278.9 176 75.6
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 2.1e-72 276.6 178 74.7
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 4.6e-72 275.4 178 74.2
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 4.6e-72 275.4 179 72.6
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 7.8e-72 274.6 181 72.4
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 2.3e-71 273.1 174 75.3
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 1.5e-70 270.4 179 73.2
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 1.5e-70 270.4 180 72.8
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 4.3e-70 268.9 177 72.3
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 5.6e-70 268.5 176 73.9
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 2.8e-69 266.2 179 71.5
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 1.4e-68 263.8 182 74.7
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 3.1e-68 262.7 179 69.8
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 2.6e-67 259.6 173 71.7
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 3.4e-67 259.2 210 60.0
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 3.4e-67 259.2 169 72.8
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 4.4e-67 258.8 182 72.0
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 5.8e-67 258.5 220 63.2
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 7.6e-67 258.1 179 68.2
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 7.6e-67 258.1 201 63.7
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 1.7e-66 256.9 184 67.9
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 4.9e-66 255.4 168 72.6
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 4.9e-66 255.4 168 72.6
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 1.1e-65 254.2 167 71.9
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.4e-65 253.8 174 69.0
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 1.4e-65 253.8 175 66.9
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 1.4e-65 253.8 164 73.8
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 2.4e-65 253.1 200 63.5
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 2.4e-65 253.1 169 71.6
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 4.2e-65 252.3 176 68.8
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 9.3e-65 251.1 174 67.8
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 1.2e-64 250.8 173 68.8
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 2.1e-64 250.0 167 71.3
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 2.1e-64 250.0 175 69.7
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 4.6e-64 248.8 176 68.8
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 4.6e-64 248.8 184 69.0
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 7.8e-64 248.1 170 70.0
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 1.7e-63 246.9 170 70.0
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 3.9e-63 245.7 175 65.7
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 3.9e-63 245.7 173 68.8
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 5.1e-63 245.4 178 68.0
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 5.1e-63 245.4 178 68.0
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 5.1e-63 245.4 178 68.0
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 1.5e-62 243.8 177 68.4
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 3.3e-62 242.7 179 65.4
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 3.3e-62 242.7 192 63.5
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 3.3e-62 242.7 156 73.7
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 7.3e-62 241.5 176 67.0
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 9.6e-62 241.1 178 62.9
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 9.6e-62 241.1 180 66.1
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 1.6e-61 240.4 171 67.8
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 2.1e-61 240.0 178 66.3
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 2.1e-61 240.0 179 67.0
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 3.6e-61 239.2 178 66.3
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 3.6e-61 239.2 178 66.3
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 4.8e-61 238.8 178 66.3
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 8.1e-61 238.0 214 58.9
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 8.1e-61 238.0 190 61.1
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 1.1e-60 237.7 172 68.0
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 2.4e-60 236.5 178 65.7
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 2.4e-60 236.5 188 60.6
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 4.0e-60 235.7 172 66.9
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 6.9e-60 235.0 178 65.7
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 6.9e-60 235.0 178 60.7
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 2.0e-59 233.4 180 66.7
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 2.6e-59 233.0 178 64.6
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 7.6e-59 231.5 177 63.8
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 7.6e-59 231.5 186 63.4
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 8.4e-58 228.0 179 63.7
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 1.1e-57 227.6 186 62.9
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.1e-57 227.6 167 64.7
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 1.4e-57 227.3 155 69.0
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 1.4e-57 227.3 239 51.5
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.4e-57 227.3 156 65.4
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.6e-56 223.8 174 63.2
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 2.1e-56 223.4 155 65.8
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 7.4e-54 214.9 174 62.1
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 5.3e-52 208.8 141 73.0
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 5.3e-52 208.8 158 63.9
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.7e-50 203.8 133 72.2
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 1.4e-49 200.7 155 65.2
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.1e-49 198.4 163 58.3
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 1.2e-48 197.6 134 73.1
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 3.5e-48 196.1 157 61.8
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 6.0e-48 195.3 157 62.4
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.0e-47 194.5 254 47.6
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 1.3e-47 194.1 156 59.6
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.3e-47 193.4 157 61.1
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 1.5e-46 190.7 167 58.1
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 1.2e-43 181.0 122 70.5
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 5.8e-43 178.7 152 61.2
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 2.9e-42 176.4 127 66.9
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.0e-36 154.8 119 62.2
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 1.4e-31 141.0 192 45.8
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 3.7e-29 132.9 80 81.2
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 6.3e-29 132.1 81 74.1
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 2.5e-25 120.2 108 60.2
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 2.5e-17 93.6 150 36.7
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 5.3e-12 75.9 90 51.1
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 2.2e-10 70.5 45 66.7
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 3.6e-08 63.2 48 60.4
PGSC0003DMG402001979 Solanum tuberosum HOM05D000011 ORTHO05D000018 1.0e-07 61.6 41 63.4
Sopen11g002570 Solanum pennellii HOM05D000011 ORTHO05D000018 7.5e-06 55.5 33 72.7


User provided reference genes

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