Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1076 Cannabis sativa HOM05D008058 ORTHO05D010564 9.9e-70 266.5 124 100.0
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 1.0e-66 256.5 124 95.2
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-63 246.1 124 93.5
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 2.2e-61 238.8 124 87.9
CANSAT01G2125 Cannabis sativa HOM05D008058 ORTHO05D010564 2.9e-53 211.8 102 94.1
CANSAT01G1382 Cannabis sativa HOM05D008058 ORTHO05D010564 3.4e-46 188.3 95 91.6
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 1.1e-36 156.8 123 56.1
CANSAT78G1148 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-36 156.4 123 56.9
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 1.9e-36 156.0 123 56.9
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-35 152.9 122 54.1
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 3.9e-34 148.3 123 52.8
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 2.0e-33 146.0 123 52.8
CANSAT25G2931 Cannabis sativa HOM05D008058 ORTHO05D010564 1.6e-27 126.3 121 46.3
CANSAT21G2086 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-27 125.9 121 46.3
CANSAT64G2972 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-25 118.6 121 43.8
CANSAT78G2366 Cannabis sativa HOM05D008058 ORTHO05D010564 6.3e-24 114.4 102 49.0
CANSAT35G0551 Cannabis sativa HOM05D008058 ORTHO05D010564 4.1e-23 111.7 102 49.0
CANSAT01G0635 Cannabis sativa HOM05D008058 ORTHO05D010564 7.0e-23 110.9 102 48.0
CANSAT64G0678 Cannabis sativa HOM05D008058 ORTHO05D010564 5.0e-21 104.8 120 37.5
CANSAT35G1653 Cannabis sativa HOM05D008058 ORTHO05D010564 3.2e-20 102.1 120 35.8
CANSAT56G2017 Cannabis sativa HOM05D008058 ORTHO05D010564 5.5e-20 101.3 109 43.1
CANSAT21G1560 Cannabis sativa HOM05D008058 ORTHO05D010564 2.7e-19 99.0 121 37.2
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 3.6e-19 98.6 93 47.3
CANSAT21G1495 Cannabis sativa HOM05D008058 ORTHO05D010564 8.0e-19 97.4 121 37.2
CANSAT01G1756 Cannabis sativa HOM05D008058 ORTHO05D010564 3.7e-16 88.6 119 33.6
CANSAT64G2472 Cannabis sativa HOM05D008058 ORTHO05D010564 4.8e-16 88.2 112 41.1
CANSAT54G1091 Cannabis sativa HOM05D008058 ORTHO05D010564 8.5e-13 77.4 122 33.6
CANSAT80G0349 Cannabis sativa HOM05D008058 ORTHO05D010564 8.5e-13 77.4 124 33.9
CANSAT56G3134 Cannabis sativa HOM05D008058 ORTHO05D010564 7.2e-12 74.3 123 32.5
CANSAT54G2324 Cannabis sativa HOM05D008058 ORTHO05D010564 6.8e-10 67.8 37 81.1
CANSAT01G1620 Cannabis sativa HOM05D008058 ORTHO05D010564 8.8e-10 67.4 92 31.5
Nitab4.5_0010993g0030 Nicotiana tabacum HOM05D009490 ORTHO05D011730 1.3e-08 63.5 118 29.7
MELO3C033961.2 Cucumis melo HOM05D010240 ORTHO05D011271 8.3e-08 60.8 106 31.1
C04p39280 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-07 60.1 117 29.1
BolC8t47761H Brassica oleracea HOM05D000471 ORTHO05D000199 1.4e-07 60.1 117 29.1
C05p41480 Brassica napus HOM05D000471 ORTHO05D000199 1.8e-07 59.7 117 28.2
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 1.8e-07 59.7 117 28.2
Thhalv10015694m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.4e-07 59.3 124 29.0
A05p29030 Brassica napus HOM05D000471 ORTHO05D000199 5.4e-07 58.2 117 28.2
A07p12530 Brassica napus HOM05D000471 ORTHO05D000199 5.4e-07 58.2 117 28.2
C06p16640 Brassica napus HOM05D000471 ORTHO05D000199 5.4e-07 58.2 117 28.2
BraA05t20103Z Brassica rapa HOM05D000471 ORTHO05D000199 5.4e-07 58.2 117 28.2
BraA08t33333Z Brassica rapa HOM05D000471 ORTHO05D000199 5.4e-07 58.2 117 28.2
Carub.0006s2832 Capsella rubella HOM05D001285 ORTHO05D000199 5.4e-07 58.2 117 30.8
C09p20800 Brassica napus HOM05D000471 ORTHO05D000199 7.0e-07 57.8 117 28.2
BolC9t54976H Brassica oleracea HOM05D000471 ORTHO05D000199 7.0e-07 57.8 117 28.2
RcHm_v2.0_Chr2g0104761 Rosa chinensis HOM05D000529 ORTHO05D000472 7.0e-07 57.8 116 29.3
C08p09140 Brassica napus HOM05D000471 ORTHO05D000199 1.6e-06 56.6 117 28.2
MELO3C029579.2 Cucumis melo HOM05D010240 ORTHO05D011271 1.6e-06 56.6 115 28.7
Thhalv10002866m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.6e-06 56.6 117 29.9
BcaC06g30937 Brassica carinata HOM05D001285 ORTHO05D000199 2.0e-06 56.2 114 28.9
BolC2t10781H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 56.2 117 28.2
BolC4t25495H Brassica oleracea HOM05D000471 ORTHO05D000199 2.0e-06 56.2 87 33.3
Carub.0004s0683 Capsella rubella HOM05D001285 ORTHO05D000199 2.0e-06 56.2 117 29.9
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.0e-06 56.2 114 29.8
BcaB03g15573 Brassica carinata HOM05D001285 ORTHO05D000199 2.7e-06 55.8 114 28.9
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 2.7e-06 55.8 89 38.2
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.5e-06 55.5 106 32.1
TWI18G0558 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.5e-06 55.5 113 26.5
TWI38G1257 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.5e-06 55.5 113 26.5
TWI53G0735 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.5e-06 55.5 113 26.5
TWI63G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.5e-06 55.5 113 26.5
TWI79G1717 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 3.5e-06 55.5 113 26.5
Carub.0004s0691 Capsella rubella HOM05D001285 ORTHO05D000199 5.9e-06 54.7 115 27.8
BolC9t55617H Brassica oleracea HOM05D000471 ORTHO05D000199 7.7e-06 54.3 119 27.7
Carub.0005s0342 Capsella rubella HOM05D001285 ORTHO05D000199 7.7e-06 54.3 117 25.6
Carub.0027s0004 Capsella rubella HOM05D001285 ORTHO05D000199 7.7e-06 54.3 115 27.8
Thhalv10000500m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 7.7e-06 54.3 120 29.2


User provided reference genes

Program Settings