Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 1.5e-104 382.9 202 100.0
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 5.6e-62 241.5 197 62.4
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 5.6e-62 241.5 197 61.4
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 4.7e-61 238.4 200 62.5
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 3.4e-59 232.3 193 61.7
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.3e-58 230.3 199 62.8
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 1.3e-58 230.3 198 60.6
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 1.4e-57 226.9 201 61.7
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.4e-57 226.1 198 60.1
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.4e-57 226.1 198 60.6
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 4.1e-57 225.3 194 60.3
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 5.4e-57 224.9 194 60.3
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 7.8e-56 221.1 200 56.5
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.3e-55 220.3 191 64.4
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 2.5e-54 216.1 195 56.4
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 4.3e-54 215.3 199 55.3
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 4.3e-54 215.3 199 57.8
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 5.6e-54 214.9 198 58.1
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 1.2e-53 213.8 199 55.3
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 1.6e-53 213.4 199 58.8
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 2.8e-53 212.6 197 56.9
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 4.7e-53 211.8 199 57.3
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 4.7e-53 211.8 201 54.2
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 6.2e-53 211.5 199 58.8
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 6.2e-53 211.5 195 57.9
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 8.1e-53 211.1 152 66.4
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 8.1e-53 211.1 195 55.4
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 3.1e-52 209.1 197 56.9
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 6.8e-52 208.0 193 58.5
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 6.8e-52 208.0 199 54.8
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 6.8e-52 208.0 174 60.3
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 6.8e-52 208.0 174 60.3
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 8.9e-52 207.6 191 57.6
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 1.2e-51 207.2 199 52.8
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 1.5e-51 206.8 194 55.2
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 9.9e-51 204.1 162 66.7
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 9.9e-51 204.1 200 55.0
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 1.3e-50 203.8 194 57.2
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 1.7e-50 203.4 199 56.8
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 1.7e-50 203.4 197 57.4
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 2.2e-50 203.0 164 61.0
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 4.9e-50 201.8 184 54.3
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 8.3e-50 201.1 199 56.3
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 1.4e-49 200.3 200 50.5
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 1.9e-49 199.9 200 51.0
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 3.2e-49 199.1 201 54.7
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 7.1e-49 198.0 194 56.2
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 9.2e-49 197.6 193 54.4
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.6e-48 196.8 198 57.1
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 2.1e-48 196.4 207 52.7
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 2.1e-48 196.4 163 61.3
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 2.1e-48 196.4 199 54.8
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 2.7e-48 196.1 201 49.3
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 3.5e-48 195.7 193 57.5
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 4.6e-48 195.3 196 56.6
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.7e-47 193.4 198 56.6
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 3.0e-47 192.6 212 50.0
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 1.5e-46 190.3 189 56.6
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 4.7e-45 185.3 139 64.7
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 2.4e-44 183.0 146 63.0
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 3.1e-44 182.6 189 55.0
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 4.0e-44 182.2 141 66.0
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 5.2e-44 181.8 154 59.1
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 9.9e-43 177.6 202 48.5
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 3.8e-42 175.6 180 51.7
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 6.4e-42 174.9 140 64.3
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 7.1e-41 171.4 175 51.4
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 1.3e-39 167.2 171 50.9
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 4.8e-37 158.7 140 57.1
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 1.4e-36 157.1 200 43.5
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 5.3e-36 155.2 198 49.0
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 2.0e-35 153.3 199 46.2
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 2.2e-34 149.8 183 47.5
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 2.2e-34 149.8 190 44.7
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 3.8e-34 149.1 202 45.5
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 4.9e-34 148.7 209 43.5
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 4.9e-34 148.7 203 44.8
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 8.4e-34 147.9 191 41.9
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 3.2e-33 146.0 117 62.4
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 4.2e-33 145.6 210 44.8
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 4.2e-33 145.6 210 44.8
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 5.4e-33 145.2 207 43.5
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 7.1e-33 144.8 206 43.2
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 9.3e-33 144.4 202 43.1
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 1.2e-32 144.1 206 43.2
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 1.3e-31 140.6 208 43.3
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 1.7e-31 140.2 208 43.3
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 1.1e-30 137.5 152 46.1
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 3.3e-30 136.0 198 43.4
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 2.8e-29 132.9 138 47.8
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 8.1e-29 131.3 180 43.3
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 2.4e-28 129.8 173 43.4
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 3.1e-28 129.4 208 38.0
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 8.4e-26 121.3 201 40.8
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 6.7e-23 111.7 78 69.2
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 4.0e-20 102.4 121 47.1
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 1.3e-18 97.4 185 33.5
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 2.9e-18 96.3 120 47.5
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 1.1e-17 94.4 138 34.8
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 1.1e-14 84.3 195 28.7
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 3.1e-12 76.3 150 35.3
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 4.1e-12 75.9 150 35.3
Lalb_Chr04g0250741 Lupinus albus HOM05D007615 ORTHO05D009643 5.1e-07 58.9 45 60.0


User provided reference genes

Program Settings