Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 0.0e+00 1127.9 676 100.0
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 6.4e-195 684.9 683 60.9
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 2.4e-194 682.9 683 60.8
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 2.7e-193 679.5 698 68.9
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 5.6e-191 671.8 703 57.6
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 8.9e-189 664.5 681 62.3
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 1.2e-188 664.1 698 59.0
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 2.2e-187 659.8 700 67.1
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 4.9e-187 658.7 685 61.0
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.1e-186 657.5 692 64.7
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 1.1e-186 657.5 682 67.3
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 2.4e-186 656.4 699 66.4
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 1.6e-185 653.7 676 59.5
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 1.7e-184 650.2 694 58.2
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 4.3e-183 645.6 678 61.5
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.6e-182 643.7 686 57.1
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 2.1e-182 643.3 670 60.6
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 6.2e-182 641.7 669 59.2
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 1.1e-181 641.0 673 57.5
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 7.6e-180 634.8 669 67.1
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 9.9e-180 634.4 675 57.8
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 2.9e-179 632.9 696 57.5
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 6.4e-179 631.7 693 57.1
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.0e-176 624.4 680 55.4
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 1.0e-176 624.4 684 57.3
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 2.3e-176 623.2 671 59.3
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 3.0e-176 622.9 689 56.2
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.5e-175 620.5 669 55.6
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 2.5e-175 619.8 687 54.9
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 3.6e-174 615.9 681 55.2
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 1.8e-173 613.6 685 55.6
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 1.5e-172 610.5 705 56.6
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 1.5e-172 610.5 683 60.8
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 2.6e-172 609.8 701 60.3
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 1.3e-171 607.4 678 54.7
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 2.9e-171 606.3 682 51.3
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 2.9e-171 606.3 680 55.3
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 3.8e-171 605.9 677 63.2
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 4.9e-171 605.5 701 55.1
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 3.2e-170 602.8 692 63.3
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 7.1e-170 601.7 685 57.5
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 1.2e-169 600.9 682 57.2
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 2.1e-169 600.1 703 56.0
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 4.6e-169 599.0 681 58.3
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 6.0e-169 598.6 684 63.0
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.7e-168 597.0 671 58.1
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 3.0e-168 596.3 684 61.7
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 6.6e-168 595.1 537 63.1
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 2.5e-167 593.2 680 64.0
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 2.5e-167 593.2 707 56.4
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 2.1e-166 590.1 661 57.3
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 6.2e-166 588.6 680 54.6
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 1.2e-164 584.3 710 55.9
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.5e-164 583.9 694 59.5
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 7.6e-164 581.6 739 49.4
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 1.7e-163 580.5 693 56.6
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 1.1e-162 577.8 693 56.1
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 2.4e-162 576.6 715 53.8
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 3.2e-162 576.2 671 53.1
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 3.5e-161 572.8 723 51.9
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 4.6e-161 572.4 535 59.6
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.3e-160 570.9 529 58.2
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 2.3e-160 570.1 685 55.0
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.3e-160 570.1 661 57.5
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.1e-159 567.8 531 60.8
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 1.9e-159 567.0 674 53.1
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.5e-159 566.6 531 60.8
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 4.8e-158 562.4 686 53.2
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 1.1e-157 561.2 679 55.4
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.8e-157 560.5 674 52.7
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 4.2e-154 549.3 672 54.0
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 3.9e-152 542.7 686 56.9
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 2.5e-151 540.0 601 53.6
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 3.7e-150 536.2 587 61.0
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.8e-150 535.8 536 55.4
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 3.8e-147 526.2 702 55.6
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 4.6e-145 519.2 692 48.6
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 1.1e-138 498.0 671 48.3
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 7.2e-138 495.4 685 48.6
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 3.9e-136 489.6 528 52.8
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 2.0e-135 487.3 504 53.4
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 9.7e-135 485.0 513 52.6
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 2.2e-134 483.8 581 64.4
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 4.8e-134 482.6 692 50.6
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 3.1e-133 479.9 514 54.1
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 2.9e-131 473.4 524 51.5
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 2.9e-131 473.4 524 51.5
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 5.0e-131 472.6 515 51.5
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 1.4e-130 471.1 672 48.7
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 1.2e-129 468.0 515 51.7
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 1.8e-128 464.2 523 51.1
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.1e-127 461.5 513 50.5
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.4e-125 454.5 511 49.3
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.8e-123 446.4 604 56.3
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.3e-120 437.2 531 50.3
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 5.7e-119 432.6 696 43.8
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 4.8e-118 429.5 435 55.4
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 1.6e-116 424.5 515 48.7
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 2.3e-99 367.5 393 50.9
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.1e-97 360.9 430 50.5
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 3.6e-97 360.1 645 45.4
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 6.8e-96 355.9 375 52.5
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 1.7e-91 341.3 522 41.6
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 5.8e-87 326.2 610 42.3
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 8.1e-73 279.3 531 37.7
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 6.4e-70 269.6 293 53.2
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 1.9e-61 241.5 229 55.9
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 4.6e-52 210.3 505 32.5
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 1.9e-45 188.3 232 47.8
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 3.9e-35 154.1 583 28.5
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 6.7e-35 153.3 363 33.1
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 7.4e-26 123.2 169 46.2
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 7.9e-12 76.6 90 48.9
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 1.0e-11 76.3 59 62.7
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 1.4e-11 75.9 188 58.0
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 7.4e-10 70.1 104 39.4


User provided reference genes

Program Settings