Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 1.5e-144 516.2 267 100.0
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 8.4e-90 334.3 279 63.8
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 1.1e-89 334.0 276 65.2
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 4.1e-89 332.0 273 65.9
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 9.2e-89 330.9 268 65.3
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 6.0e-88 328.2 268 64.9
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 2.3e-87 326.2 271 63.1
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 8.6e-87 324.3 270 65.2
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 1.1e-86 323.9 270 64.4
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 3.3e-86 322.4 271 66.4
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 4.3e-86 322.0 275 64.7
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 9.6e-86 320.9 269 64.3
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.8e-84 316.6 270 63.7
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 5.2e-84 315.1 268 62.7
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 8.9e-84 314.3 276 65.2
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 7.6e-83 311.2 268 60.1
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 9.9e-83 310.8 270 63.0
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 9.9e-83 310.8 259 62.9
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 4.2e-81 305.4 263 62.7
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 4.2e-81 305.4 277 63.5
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 5.4e-81 305.1 266 57.9
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 5.4e-81 305.1 268 60.4
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 9.3e-81 304.3 269 61.7
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 1.6e-80 303.5 265 65.3
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.7e-80 302.8 264 60.2
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 7.8e-80 301.2 272 58.1
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 1.3e-79 300.4 271 58.3
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 1.3e-79 300.4 271 60.1
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 8.7e-79 297.7 271 57.6
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 3.3e-78 295.8 259 62.2
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 4.3e-78 295.4 279 61.6
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 5.6e-78 295.0 272 59.2
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 7.3e-78 294.7 260 61.5
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 3.6e-77 292.4 270 61.1
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 3.6e-77 292.4 285 57.9
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 4.8e-77 292.0 265 61.9
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 4.8e-77 292.0 285 57.9
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 1.1e-76 290.8 243 65.4
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 1.8e-76 290.0 269 60.2
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 4.0e-76 288.9 255 63.5
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 5.3e-76 288.5 270 61.5
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 9.0e-76 287.7 274 59.1
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.2e-75 287.3 267 57.3
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 2.0e-75 286.6 254 63.8
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 4.4e-75 285.4 258 58.1
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 2.9e-74 282.7 274 61.3
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 4.9e-74 282.0 279 57.3
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 1.4e-73 280.4 274 56.6
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 1.2e-72 277.3 277 56.3
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 1.6e-72 276.9 274 56.9
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 1.6e-72 276.9 267 55.1
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 1.6e-72 276.9 269 60.2
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 2.1e-72 276.6 256 60.2
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 2.7e-72 276.2 269 56.1
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 3.5e-72 275.8 270 56.7
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 6.0e-72 275.0 205 65.4
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 6.0e-72 275.0 263 57.8
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 1.7e-71 273.5 276 57.2
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 2.3e-71 273.1 285 54.4
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 6.6e-71 271.6 262 55.3
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 3.3e-70 269.2 271 56.1
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 4.3e-70 268.9 282 54.3
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 5.6e-70 268.5 267 54.7
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 7.3e-70 268.1 267 55.8
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 9.6e-70 267.7 270 55.2
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 1.3e-69 267.3 249 60.2
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 2.8e-69 266.2 270 55.6
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 2.8e-69 266.2 205 63.9
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 2.8e-69 266.2 220 59.5
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 1.1e-68 264.2 273 53.5
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 2.4e-68 263.1 285 51.2
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 2.4e-68 263.1 289 54.0
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 3.4e-67 259.2 265 55.1
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 4.5e-67 258.8 258 53.5
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 5.8e-67 258.5 185 67.0
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 7.6e-67 258.1 274 55.1
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 1.7e-66 256.9 259 54.8
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 8.4e-66 254.6 271 55.7
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 4.2e-65 252.3 320 50.6
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 1.6e-64 250.4 204 61.8
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 4.6e-64 248.8 294 48.3
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 7.9e-64 248.1 270 56.3
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 7.9e-64 248.1 266 54.5
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 2.3e-63 246.5 273 50.9
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 5.1e-63 245.4 258 54.7
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.9e-62 243.4 283 49.5
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 2.5e-62 243.0 197 66.5
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 1.3e-61 240.7 278 52.2
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 2.8e-61 239.6 269 54.3
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 2.9e-58 229.6 273 50.9
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 8.4e-58 228.0 273 50.5
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 4.1e-52 209.1 199 54.8
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 1.2e-51 207.6 170 65.3
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 1.0e-50 204.5 138 71.0
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 5.0e-50 202.2 175 56.6
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 6.5e-50 201.8 199 61.8
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 8.7e-47 191.4 216 51.4
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 4.8e-45 185.7 184 49.5
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 1.4e-44 184.1 230 47.4
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 1.2e-43 181.0 178 50.0
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 1.6e-40 170.6 197 49.7
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 7.4e-38 161.8 179 46.9
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 1.6e-32 144.1 161 55.9
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 1.4e-31 141.0 92 73.9
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 3.9e-31 139.4 212 48.6
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 6.3e-29 132.1 195 42.1
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 1.1e-28 131.3 81 76.5
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 3.1e-20 103.2 152 38.2
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 1.6e-19 100.9 75 60.0
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 2.4e-12 77.0 95 43.2
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 5.9e-11 72.4 66 60.6


User provided reference genes

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