Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0880 Cannabis sativa HOM05D006083 ORTHO05D007634 0.0e+00 1592.4 788 100.0
CANSAT56G1432 Cannabis sativa HOM05D006083 ORTHO05D007634 0.0e+00 1580.8 788 99.4
Cfa001507 Carpinus fangiana HOM05D006083 ORTHO05D007634 5.0e-268 927.9 807 58.9
Haze_17036 Corylus avellana HOM05D006083 ORTHO05D007634 1.2e-266 923.3 807 58.6
QL08p059019 Quercus lobata HOM05D006083 ORTHO05D007634 7.6e-256 887.5 810 57.2
Prupe.2G231200 Prunus persica HOM05D006083 ORTHO05D007634 1.3e-255 886.7 800 58.0
FAN03G2083 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.3e-251 871.7 815 56.9
FAN06G5109 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.7e-250 868.2 815 56.9
FAN06G0387 Fragaria x ananassa HOM05D006083 ORTHO05D007634 1.4e-249 866.7 815 56.8
FAN01G1089 Fragaria x ananassa HOM05D006083 ORTHO05D007634 4.0e-249 865.1 815 56.8
FvH4_7g21930 Fragaria vesca HOM05D006083 ORTHO05D007634 5.1e-244 848.2 815 55.7
MD07G1193600 Malus domestica HOM05D006083 ORTHO05D007634 5.1e-244 848.2 879 52.8
Atru.chr12.505 Acer truncatum HOM05D006083 ORTHO05D007634 1.3e-242 843.6 815 55.5
Thecc.10G046700 Theobroma cacao HOM05D006083 ORTHO05D007634 6.2e-234 814.7 814 52.6
CiPaw.01G284100 Carya illinoinensis HOM05D006083 ORTHO05D007634 1.4e-233 813.5 811 53.4
COL.COLO4_14970 Corchorus olitorius HOM05D006083 ORTHO05D007634 1.3e-231 807.0 815 52.1
Potri.008G052500 Populus trichocarpa HOM05D006083 ORTHO05D007634 8.4e-231 804.3 814 52.8
Duzib114G0803 Durio zibethinus HOM05D006083 ORTHO05D007634 1.9e-227 793.1 817 52.0
Sabra08G0037800 Salix brachista HOM05D006083 ORTHO05D007634 1.5e-224 783.5 814 51.6
Manes.07G113300 Manihot esculenta HOM05D006083 ORTHO05D007634 3.4e-224 782.3 812 52.1
TWI15G0674 Tripterygium wilfordii HOM05D006083 ORTHO05D007634 5.8e-224 781.6 820 51.0
Actinidia02966 Actinidia chinensis HOM05D006083 ORTHO05D007634 8.4e-223 777.7 816 50.9
CSS0008531 Camellia sinensis var. sinensis HOM05D006083 ORTHO05D007634 5.5e-222 775.0 807 51.5
Potri.010G208200 Populus trichocarpa HOM05D006083 ORTHO05D007634 2.1e-221 773.1 814 51.2
Ciclev10030497m.g Citrus clementina HOM05D006083 ORTHO05D007634 2.7e-221 772.7 800 52.1
Lj1g0008101 Lotus japonicus HOM05D006083 ORTHO05D007634 3.9e-220 768.8 803 50.6
arahy.Tifrunner.gnm1.ann1.ES2X5Y Arachis hypogaea HOM05D006083 ORTHO05D007634 6.7e-220 768.1 815 48.8
arahy.Tifrunner.gnm1.ann1.V7LDKI Arachis hypogaea HOM05D006083 ORTHO05D007634 6.7e-220 768.1 815 48.8
Dinv31433 Davidia involucrata HOM05D006083 ORTHO05D007634 1.1e-219 767.3 790 52.0
Gorai.012G069900 Gossypium raimondii HOM05D006083 ORTHO05D007634 1.9e-219 766.5 813 50.6
Gohir.D04G062600 Gossypium hirsutum HOM05D006083 ORTHO05D007634 4.3e-219 765.4 809 50.7
Gohir.A05G349900 Gossypium hirsutum HOM05D006083 ORTHO05D007634 5.7e-219 765.0 814 50.4
Lalb_Chr10g0091771 Lupinus albus HOM05D006083 ORTHO05D007634 7.4e-219 764.6 815 50.1
Glyma.18G288300 Glycine max HOM05D006083 ORTHO05D007634 5.3e-217 758.4 812 49.6
CsaV3_5G026410 Cucumis sativus L. HOM05D006083 ORTHO05D007634 2.0e-216 756.5 801 51.3
ClCG09G020050 Citrullus lanatus HOM05D006083 ORTHO05D007634 5.0e-215 751.9 811 50.7
MELO3C025449.2 Cucumis melo HOM05D006083 ORTHO05D007634 2.5e-214 749.6 801 51.1
VMungo1383G1537 Vigna mungo HOM05D006083 ORTHO05D007634 3.2e-214 749.2 812 48.6
Rhsim03G0132700 Rhododendron simsii HOM05D006083 ORTHO05D007634 7.9e-213 744.6 809 49.4
Lalb_Chr04g0257841 Lupinus albus HOM05D006083 ORTHO05D007634 2.3e-212 743.0 817 48.5
Phvul.008G013732 Phaseolus vulgaris HOM05D006083 ORTHO05D007634 3.7e-210 735.7 809 48.2
Psat3g185080 Pisum sativum HOM05D006083 ORTHO05D007634 5.3e-209 731.9 815 48.7
Ca_07227_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 1.4e-206 723.8 813 48.2
TPR.G15506 Trifolium pratense HOM05D006083 ORTHO05D007634 1.4e-206 723.8 815 47.5
GSVIVG01016589001 Vitis vinifera HOM05D006083 ORTHO05D007634 3.2e-206 722.6 799 48.9
Lj1A934T60 Lonicera japonica HOM05D006083 ORTHO05D007634 5.5e-206 721.8 834 46.6
Sed0020975 Sechium edule HOM05D006083 ORTHO05D007634 2.1e-205 719.9 809 48.8
Medtr7g024000 Medicago truncatula HOM05D006083 ORTHO05D007634 2.3e-204 716.5 819 47.6
Eucgr.G02918 Eucalyptus grandis HOM05D006083 ORTHO05D007634 1.5e-203 713.8 816 47.8
RcHm_v2.0_Chr1g0366211 Rosa chinensis HOM05D006083 ORTHO05D007634 3.1e-201 706.1 637 58.9
PGR142G3850 Punica granatum HOM05D006083 ORTHO05D007634 9.1e-201 704.5 815 47.0
Sc06g0002680 Simmondsia chinensis HOM05D006083 ORTHO05D007634 2.1e-197 693.3 808 45.5
Cc02_g08180 Coffea canephora HOM05D006083 ORTHO05D007634 2.3e-196 689.9 812 46.7
Ca_29789_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 3.3e-195 686.0 772 48.2
Sopen04g005570 Solanum pennellii HOM05D006083 ORTHO05D007634 1.4e-193 680.6 812 46.6
Nn2g12936 Nelumbo nucifera HOM05D006083 ORTHO05D007634 2.6e-192 676.4 817 46.4
Oeu040905.3 Olea europaea HOM05D006083 ORTHO05D007634 2.2e-191 673.3 835 46.3
Solyc04g011380.4 Solanum lycopersicum HOM05D006083 ORTHO05D007634 3.8e-191 672.5 812 46.1
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 4.7e-189 665.6 759 48.4
THA.LOC104810174 Tarenaya hassleriana HOM05D006083 ORTHO05D007634 3.0e-188 662.9 816 45.5
CAN.G786.23 Capsicum annuum HOM05D006083 ORTHO05D007634 5.2e-188 662.1 814 46.1
Peaxi162Scf00060g00026 Petunia axillaris HOM05D006083 ORTHO05D007634 2.6e-187 659.8 815 45.9
DCAR_027665 Daucus carota HOM05D006083 ORTHO05D007634 1.3e-186 657.5 838 44.9
Hund12547 Selenicereus undatus HOM05D006083 ORTHO05D007634 3.5e-184 649.4 820 45.4
Cpa.g.sc1.374 Carica papaya HOM05D006083 ORTHO05D007634 4.7e-181 639.0 658 50.2
EL10Ac2g03425 Beta vulgaris HOM05D006083 ORTHO05D007634 2.6e-179 633.3 810 44.4
vmacro07157 Vaccinium macrocarpon HOM05D006083 ORTHO05D007634 5.7e-179 632.1 1077 36.7
Aqoxy4G02985 Aquilegia oxysepala HOM05D006083 ORTHO05D007634 8.3e-178 628.2 806 43.1
AL4G36990 Arabidopsis lyrata HOM05D006083 ORTHO05D007634 5.4e-177 625.5 810 44.9
CARHR134450 Cardamine hirsuta HOM05D006083 ORTHO05D007634 2.9e-175 619.8 811 44.9
Sp4g21870 Schrenkiella parvula HOM05D006083 ORTHO05D007634 1.0e-172 611.3 810 44.0
PSO339G3664 Papaver somniferum HOM05D006083 ORTHO05D007634 4.4e-171 605.9 807 42.4
PSO384G3245 Papaver somniferum HOM05D006083 ORTHO05D007634 1.3e-170 604.4 814 42.5
AT2G39580 Arabidopsis thaliana HOM05D006083 ORTHO05D007634 2.8e-170 603.2 812 43.6
MBI14_g18543_MAGBIO Magnolia biondii HOM05D006083 ORTHO05D007634 2.8e-170 603.2 852 41.7
AUR62040954 Chenopodium quinoa HOM05D006083 ORTHO05D007634 3.7e-170 602.8 761 45.5
Thhalv10016135m.g Eutrema salsugineum HOM05D006083 ORTHO05D007634 1.4e-169 600.9 810 44.0
HanXRQChr09g0247731 Helianthus annuus HOM05D006083 ORTHO05D007634 4.1e-169 599.4 791 41.6
A04p30380 Brassica napus HOM05D006083 ORTHO05D007634 1.2e-168 597.8 813 43.3
BraA04t18470Z Brassica rapa HOM05D006083 ORTHO05D007634 1.6e-168 597.4 799 43.7
TAR369G0895 Trochodendron aralioides HOM05D006083 ORTHO05D007634 1.6e-168 597.4 652 50.8
BolC4t28242H Brassica oleracea HOM05D006083 ORTHO05D007634 1.0e-167 594.7 799 43.6
C04p67440 Brassica napus HOM05D006083 ORTHO05D007634 2.3e-167 593.6 813 43.3
Aa31LG5G20040 Aethionema arabicum HOM05D006083 ORTHO05D007634 3.3e-166 589.7 810 43.6
Carub.0004s2165 Capsella rubella HOM05D006083 ORTHO05D007634 2.1e-165 587.0 808 42.9
Lsat_1_v5_gn_9_65161 Lactuca sativa HOM05D006083 ORTHO05D007634 2.0e-163 580.5 797 41.7
AUR62038373 Chenopodium quinoa HOM05D006083 ORTHO05D007634 1.5e-158 564.3 711 45.6
TAR623G0128 Trochodendron aralioides HOM05D006083 ORTHO05D007634 7.3e-158 562.0 650 47.4
FAN10G0925 Fragaria x ananassa HOM05D006083 ORTHO05D007634 9.5e-150 535.0 540 54.3
SHI22592 Sapria himalayana HOM05D006083 ORTHO05D007634 1.8e-148 530.8 832 38.0
ATR0559G184 Amborella trichopoda HOM05D006083 ORTHO05D007634 1.9e-145 520.8 840 38.5
CDE05G2458 Ceratophyllum demersum HOM05D006083 ORTHO05D007634 9.2e-145 518.5 807 37.7
FAN10G2882 Fragaria x ananassa HOM05D006083 ORTHO05D007634 6.8e-132 475.7 417 58.8
Zm00001eb028750 Zea mays HOM05D006083 ORTHO05D007634 1.6e-128 464.5 805 36.0
Nitab4.5_0005525g0010 Nicotiana tabacum HOM05D006083 ORTHO05D007634 7.9e-120 435.6 801 36.1
SEGI_22945 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 9.0e-108 395.6 887 30.1
Nitab4.5_0003969g0020 Nicotiana tabacum HOM05D006083 ORTHO05D007634 5.5e-97 359.8 414 48.6
Peaxi162Scf00060g00126 Petunia axillaris HOM05D006083 ORTHO05D007634 6.7e-95 352.8 442 47.1
HPP92_018996 Vanilla planifolia HOM05D006083 ORTHO05D007634 7.7e-91 339.3 609 35.5
Mapoly0075s0039 Marchantia polymorpha HOM05D006083 ORTHO05D007634 6.3e-77 293.1 877 27.7
Os12g0566500 Oryza sativa ssp. japonica HOM05D006083 ORTHO05D007634 8.2e-69 266.2 453 34.0
SEGI_25206 Sequoiadendron giganteum HOM05D006083 ORTHO05D007634 1.3e-66 258.8 540 30.7
BcaB06g29099 Brassica carinata HOM05D006083 ORTHO05D007634 1.4e-52 212.2 281 45.2
Actinidia07719 Actinidia chinensis HOM05D001446 ORTHO05D001360 2.3e-50 204.9 652 27.3
Pp3c6_12750 Physcomitrium patens HOM05D006083 ORTHO05D007634 1.1e-49 202.6 639 27.4
AagrBONN_evm.TU.Sc2ySwM_228.2795 Anthoceros agrestis HOM05D000140 ORTHO05D007634 2.8e-48 198.0 636 29.4
SMO367G1201 Selaginella moellendorffii HOM05D006083 ORTHO05D007634 1.8e-44 185.3 588 28.7
RcHm_v2.0_Chr1g0366201 Rosa chinensis HOM05D006083 ORTHO05D007634 8.3e-37 159.8 148 55.4
Ca_07226_v3 Cicer arietinum L. HOM05D006083 ORTHO05D007634 7.0e-36 156.8 148 52.0
Glyma.02G093802 Glycine max HOM05D006083 ORTHO05D007634 5.6e-33 147.1 143 49.0
Cpa.g.sc1.375 Carica papaya HOM05D006083 ORTHO05D007634 6.4e-13 80.5 94 41.5
ATR0618G162 Amborella trichopoda HOM05D006083 ORTHO05D007634 1.0e-10 73.2 73 49.3


User provided reference genes

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