Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 0.0e+00 1153.3 598 100.0
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 3.2e-97 360.1 607 44.2
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.3e-95 354.8 593 43.2
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 6.4e-90 335.9 555 44.5
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 5.6e-86 322.8 582 41.9
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 4.8e-85 319.7 618 41.6
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 3.1e-84 317.0 575 40.7
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 3.8e-74 283.5 579 40.4
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 4.1e-68 263.5 548 40.1
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 6.9e-68 262.7 585 38.5
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 1.7e-66 258.1 587 38.2
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.2e-66 257.7 584 38.9
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 2.1e-64 251.1 441 42.2
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 2.7e-64 250.8 563 38.5
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 4.6e-64 250.0 579 35.9
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 1.8e-63 248.1 553 39.4
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.8e-63 248.1 590 38.5
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 4.8e-61 240.0 613 36.9
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 6.9e-60 236.1 591 36.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 1.2e-56 225.3 557 36.1
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 1.0e-55 222.2 593 37.8
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 3.0e-55 220.7 587 36.5
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 5.7e-54 216.5 664 33.7
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.7e-53 214.9 577 37.8
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 4.8e-53 213.4 552 37.3
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 5.3e-52 209.9 310 46.5
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 5.3e-52 209.9 576 35.4
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 2.6e-51 207.6 547 36.2
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 2.6e-51 207.6 441 38.5
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 7.7e-51 206.1 614 34.0
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 3.8e-50 203.8 588 35.7
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 6.5e-50 203.0 518 36.5
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 1.9e-49 201.4 578 36.2
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 7.2e-49 199.5 506 36.2
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 7.9e-48 196.1 437 39.8
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 1.0e-47 195.7 437 39.8
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.4e-47 195.3 437 39.1
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 5.2e-47 193.4 683 31.8
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 8.8e-47 192.6 469 36.7
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.0e-46 191.4 686 31.5
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 4.8e-45 186.8 588 34.4
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 9.1e-44 182.6 600 33.8
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 2.6e-43 181.0 574 35.2
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 7.7e-43 179.5 572 35.0
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 1.7e-42 178.3 503 36.4
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 5.0e-42 176.8 598 33.4
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 8.5e-42 176.0 362 40.3
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 8.0e-40 169.5 689 30.5
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 1.2e-38 165.6 538 33.3
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 2.8e-37 161.0 309 42.1
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 1.8e-36 158.3 533 35.8
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 5.3e-36 156.8 582 30.9
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 7.0e-36 156.4 608 32.6
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 4.5e-35 153.7 205 46.8
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 4.5e-35 153.7 571 32.6
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.0e-34 152.5 503 32.8
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 1.7e-34 151.8 594 32.7
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 3.8e-34 150.6 483 34.0
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 6.5e-34 149.8 444 33.6
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 8.5e-34 149.4 567 31.6
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 1.9e-33 148.3 555 32.8
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 4.2e-33 147.1 554 32.7
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 9.4e-33 146.0 554 31.9
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.2e-32 145.6 210 44.8
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 2.7e-32 144.4 692 31.4
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 4.7e-32 143.7 577 31.0
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 6.1e-32 143.3 196 48.5
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 6.1e-32 143.3 530 33.2
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 6.1e-32 143.3 583 31.7
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 8.0e-32 142.9 204 45.1
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.4e-31 142.1 485 33.2
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 2.3e-31 141.4 562 31.9
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 2.3e-31 141.4 493 32.5
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 6.8e-31 139.8 476 33.2
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 1.5e-30 138.7 453 31.8
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.6e-30 137.9 355 35.5
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 4.4e-30 137.1 185 51.4
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 7.5e-30 136.3 608 31.2
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 9.8e-30 136.0 511 34.1
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 2.8e-29 134.4 570 29.6
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 6.3e-29 133.3 559 31.8
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 8.3e-29 132.9 612 29.6
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 2.4e-28 131.3 500 30.6
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 1.6e-27 128.6 476 31.1
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.6e-27 128.6 454 31.5
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 2.0e-27 128.3 261 38.7
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 2.0e-27 128.3 480 32.1
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.0e-26 125.9 451 31.5
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 2.9e-26 124.4 514 29.8
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 5.0e-26 123.6 486 31.7
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 1.9e-25 121.7 206 41.7
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 2.5e-25 121.3 185 43.8
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 3.6e-24 117.5 182 41.2
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 6.1e-24 116.7 563 31.3
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 3.0e-23 114.4 602 29.7
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 3.4e-22 110.9 142 47.2
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 5.4e-20 103.6 592 28.2
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 2.0e-19 101.7 453 30.9
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 1.3e-18 99.0 454 29.3
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 2.9e-18 97.8 243 39.1
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 3.0e-15 87.8 566 28.6
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 1.7e-13 82.0 418 29.4
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 1.2e-08 65.9 278 29.9
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 8.9e-07 59.7 262 26.3


User provided reference genes

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